Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1K9M:A272:A273
Extra
PDB:
ATOM 1 O3' U A 271 65.624 104.032 -7.539 1.00135.82 O
ATOM 2 P C A 272 64.456 102.925 -7.383 1.00135.68 P
ATOM 3 OP1 C A 272 65.115 101.581 -7.426 1.00135.65 O
ATOM 4 OP2 C A 272 63.375 103.238 -8.353 1.00136.13 O
ATOM 5 O5' C A 272 63.865 103.177 -5.922 1.00134.22 O
ATOM 6 C5' C A 272 64.480 104.121 -5.022 1.00132.05 C
ATOM 7 C4' C A 272 63.686 105.414 -4.967 1.00130.57 C
ATOM 8 O4' C A 272 63.792 106.122 -6.235 1.00130.75 O
ATOM 9 C3' C A 272 62.190 105.303 -4.664 1.00129.21 C
ATOM 10 O3' C A 272 61.714 106.422 -3.888 1.00126.92 O
ATOM 11 C2' C A 272 61.585 105.416 -6.069 1.00129.37 C
ATOM 12 O2' C A 272 60.230 105.823 -6.123 1.00129.22 O
ATOM 13 C1' C A 272 62.500 106.483 -6.668 1.00129.86 C
ATOM 14 N1 C A 272 62.527 106.702 -8.129 1.00129.77 N
ATOM 15 C2 C A 272 63.209 107.834 -8.621 1.00129.75 C
ATOM 16 O2 C A 272 63.779 108.596 -7.824 1.00128.85 O
ATOM 17 N3 C A 272 63.226 108.065 -9.952 1.00130.50 N
ATOM 18 C4 C A 272 62.602 107.229 -10.784 1.00130.89 C
ATOM 19 N4 C A 272 62.628 107.516 -12.088 1.00131.21 N
ATOM 20 C5 C A 272 61.918 106.067 -10.317 1.00130.45 C
ATOM 21 C6 C A 272 61.905 105.844 -8.995 1.00129.92 C
ATOM 22 P A A 273 62.660 107.144 -2.783 1.00124.96 P
ATOM 23 OP1 A A 273 61.819 107.437 -1.588 1.00124.23 O
ATOM 24 OP2 A A 273 63.363 108.260 -3.475 1.00124.54 O
ATOM 25 O5' A A 273 63.765 106.069 -2.370 1.00122.89 O
TER
ATOM 1 O3' C B 272 61.714 106.422 -3.888 1.00126.92 O
ATOM 2 P A B 273 62.660 107.144 -2.783 1.00124.96 P
ATOM 3 OP1 A B 273 61.819 107.437 -1.588 1.00124.23 O
ATOM 4 OP2 A B 273 63.363 108.260 -3.475 1.00124.54 O
ATOM 5 O5' A B 273 63.765 106.069 -2.370 1.00122.89 O
ATOM 6 C5' A B 273 63.472 104.985 -1.463 1.00118.88 C
ATOM 7 C4' A B 273 64.716 104.619 -0.680 1.00115.76 C
ATOM 8 O4' A B 273 65.758 104.214 -1.616 1.00115.20 O
ATOM 9 C3' A B 273 65.351 105.756 0.114 1.00113.97 C
ATOM 10 O3' A B 273 64.727 105.978 1.388 1.00111.92 O
ATOM 11 C2' A B 273 66.800 105.292 0.218 1.00113.52 C
ATOM 12 O2' A B 273 66.987 104.275 1.186 1.00112.87 O
ATOM 13 C1' A B 273 67.020 104.703 -1.179 1.00113.86 C
ATOM 14 N9 A B 273 67.508 105.676 -2.170 1.00113.53 N
ATOM 15 C8 A B 273 66.802 106.232 -3.214 1.00113.24 C
ATOM 16 N7 A B 273 67.503 107.058 -3.953 1.00113.01 N
ATOM 17 C5 A B 273 68.758 107.054 -3.360 1.00113.01 C
ATOM 18 C6 A B 273 69.963 107.721 -3.678 1.00112.82 C
ATOM 19 N6 A B 273 70.112 108.530 -4.730 1.00112.60 N
ATOM 20 N1 A B 273 71.026 107.515 -2.871 1.00112.98 N
ATOM 21 C2 A B 273 70.891 106.681 -1.834 1.00113.08 C
ATOM 22 N3 A B 273 69.823 105.982 -1.442 1.00113.42 N
ATOM 23 C4 A B 273 68.775 106.215 -2.254 1.00113.27 C
ATOM 24 P U B 274 64.451 107.491 1.904 1.00111.12 P
ATOM 25 OP1 U B 274 63.766 107.371 3.216 1.00110.97 O
ATOM 26 OP2 U B 274 63.824 108.295 0.818 1.00111.14 O
ATOM 27 O5' U B 274 65.895 108.109 2.172 1.00107.55 O
TER
ATOM 2 P C A 272 64.456 102.925 -7.383 1.00135.68 P
ATOM 3 OP1 C A 272 65.115 101.581 -7.426 1.00135.65 O
ATOM 4 OP2 C A 272 63.375 103.238 -8.353 1.00136.13 O
ATOM 5 O5' C A 272 63.865 103.177 -5.922 1.00134.22 O
ATOM 6 C5' C A 272 64.480 104.121 -5.022 1.00132.05 C
ATOM 7 C4' C A 272 63.686 105.414 -4.967 1.00130.57 C
ATOM 8 O4' C A 272 63.792 106.122 -6.235 1.00130.75 O
ATOM 9 C3' C A 272 62.190 105.303 -4.664 1.00129.21 C
ATOM 10 O3' C A 272 61.714 106.422 -3.888 1.00126.92 O
ATOM 11 C2' C A 272 61.585 105.416 -6.069 1.00129.37 C
ATOM 12 O2' C A 272 60.230 105.823 -6.123 1.00129.22 O
ATOM 13 C1' C A 272 62.500 106.483 -6.668 1.00129.86 C
ATOM 14 N1 C A 272 62.527 106.702 -8.129 1.00129.77 N
ATOM 15 C2 C A 272 63.209 107.834 -8.621 1.00129.75 C
ATOM 16 O2 C A 272 63.779 108.596 -7.824 1.00128.85 O
ATOM 17 N3 C A 272 63.226 108.065 -9.952 1.00130.50 N
ATOM 18 C4 C A 272 62.602 107.229 -10.784 1.00130.89 C
ATOM 19 N4 C A 272 62.628 107.516 -12.088 1.00131.21 N
ATOM 20 C5 C A 272 61.918 106.067 -10.317 1.00130.45 C
ATOM 21 C6 C A 272 61.905 105.844 -8.995 1.00129.92 C
ATOM 22 P A A 273 62.660 107.144 -2.783 1.00124.96 P
ATOM 23 OP1 A A 273 61.819 107.437 -1.588 1.00124.23 O
ATOM 24 OP2 A A 273 63.363 108.260 -3.475 1.00124.54 O
ATOM 25 O5' A A 273 63.765 106.069 -2.370 1.00122.89 O
TER
ATOM 1 O3' C B 272 61.714 106.422 -3.888 1.00126.92 O
ATOM 2 P A B 273 62.660 107.144 -2.783 1.00124.96 P
ATOM 3 OP1 A B 273 61.819 107.437 -1.588 1.00124.23 O
ATOM 4 OP2 A B 273 63.363 108.260 -3.475 1.00124.54 O
ATOM 5 O5' A B 273 63.765 106.069 -2.370 1.00122.89 O
ATOM 6 C5' A B 273 63.472 104.985 -1.463 1.00118.88 C
ATOM 7 C4' A B 273 64.716 104.619 -0.680 1.00115.76 C
ATOM 8 O4' A B 273 65.758 104.214 -1.616 1.00115.20 O
ATOM 9 C3' A B 273 65.351 105.756 0.114 1.00113.97 C
ATOM 10 O3' A B 273 64.727 105.978 1.388 1.00111.92 O
ATOM 11 C2' A B 273 66.800 105.292 0.218 1.00113.52 C
ATOM 12 O2' A B 273 66.987 104.275 1.186 1.00112.87 O
ATOM 13 C1' A B 273 67.020 104.703 -1.179 1.00113.86 C
ATOM 14 N9 A B 273 67.508 105.676 -2.170 1.00113.53 N
ATOM 15 C8 A B 273 66.802 106.232 -3.214 1.00113.24 C
ATOM 16 N7 A B 273 67.503 107.058 -3.953 1.00113.01 N
ATOM 17 C5 A B 273 68.758 107.054 -3.360 1.00113.01 C
ATOM 18 C6 A B 273 69.963 107.721 -3.678 1.00112.82 C
ATOM 19 N6 A B 273 70.112 108.530 -4.730 1.00112.60 N
ATOM 20 N1 A B 273 71.026 107.515 -2.871 1.00112.98 N
ATOM 21 C2 A B 273 70.891 106.681 -1.834 1.00113.08 C
ATOM 22 N3 A B 273 69.823 105.982 -1.442 1.00113.42 N
ATOM 23 C4 A B 273 68.775 106.215 -2.254 1.00113.27 C
ATOM 24 P U B 274 64.451 107.491 1.904 1.00111.12 P
ATOM 25 OP1 U B 274 63.766 107.371 3.216 1.00110.97 O
ATOM 26 OP2 U B 274 63.824 108.295 0.818 1.00111.14 O
ATOM 27 O5' U B 274 65.895 108.109 2.172 1.00107.55 O
TER
Atoms:
C2: (63.209,107.834,-8.621)
OP1: (65.115,101.581,-7.426)
OP2: (63.375,103.238,-8.353)
C4: (62.602,107.229,-10.784)
O5': (63.865,103.177,-5.922)
C3': (62.190,105.303,-4.664)
C1': (62.500,106.483,-6.668)
O4': (63.792,106.122,-6.235)
C5': (64.480,104.121,-5.022)
P: (64.456,102.925,-7.383)
O2: (63.779,108.596,-7.824)
C4': (63.686,105.414,-4.967)
C2': (61.585,105.416,-6.069)
O2': (60.230,105.823,-6.123)
N1: (62.527,106.702,-8.129)
N3: (63.226,108.065,-9.952)
N4: (62.628,107.516,-12.088)
C6: (61.905,105.844,-8.995)
C5: (61.918,106.067,-10.317)
O3': (61.714,106.422,-3.888)
OP1: (65.115,101.581,-7.426)
OP2: (63.375,103.238,-8.353)
C4: (62.602,107.229,-10.784)
O5': (63.865,103.177,-5.922)
C3': (62.190,105.303,-4.664)
C1': (62.500,106.483,-6.668)
O4': (63.792,106.122,-6.235)
C5': (64.480,104.121,-5.022)
P: (64.456,102.925,-7.383)
O2: (63.779,108.596,-7.824)
C4': (63.686,105.414,-4.967)
C2': (61.585,105.416,-6.069)
O2': (60.230,105.823,-6.123)
N1: (62.527,106.702,-8.129)
N3: (63.226,108.065,-9.952)
N4: (62.628,107.516,-12.088)
C6: (61.905,105.844,-8.995)
C5: (61.918,106.067,-10.317)
O3': (61.714,106.422,-3.888)
OP1: (61.819,107.437,-1.588)
OP2: (63.363,108.260,-3.475)
C3': (65.351,105.756,0.114)
C1': (67.020,104.703,-1.179)
C5': (63.472,104.985,-1.463)
O4': (65.758,104.214,-1.616)
C8: (66.802,106.232,-3.214)
O2': (66.987,104.275,1.186)
C6: (69.963,107.721,-3.678)
C5: (68.758,107.054,-3.360)
C4: (68.775,106.215,-2.254)
P: (62.660,107.144,-2.783)
C4': (64.716,104.619,-0.680)
C2': (66.800,105.292,0.218)
C2: (70.891,106.681,-1.834)
N1: (71.026,107.515,-2.871)
N3: (69.823,105.982,-1.442)
N6: (70.112,108.530,-4.730)
N7: (67.503,107.058,-3.953)
N9: (67.508,105.676,-2.170)
O5': (63.765,106.069,-2.370)
O3': (64.727,105.978,1.388)
OP2: (63.363,108.260,-3.475)
C3': (65.351,105.756,0.114)
C1': (67.020,104.703,-1.179)
C5': (63.472,104.985,-1.463)
O4': (65.758,104.214,-1.616)
C8: (66.802,106.232,-3.214)
O2': (66.987,104.275,1.186)
C6: (69.963,107.721,-3.678)
C5: (68.758,107.054,-3.360)
C4: (68.775,106.215,-2.254)
P: (62.660,107.144,-2.783)
C4': (64.716,104.619,-0.680)
C2': (66.800,105.292,0.218)
C2: (70.891,106.681,-1.834)
N1: (71.026,107.515,-2.871)
N3: (69.823,105.982,-1.442)
N6: (70.112,108.530,-4.730)
N7: (67.503,107.058,-3.953)
N9: (67.508,105.676,-2.170)
O5': (63.765,106.069,-2.370)
O3': (64.727,105.978,1.388)
Image (generated by PyMOL):