Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ8:0258:0228
Extra
PDB:
ATOM 1 O3' G A 257 78.659 103.550 -0.355 1.00 55.96 O
ATOM 2 P U A 258 77.152 103.504 0.198 1.00 57.33 P
ATOM 3 OP1 U A 258 76.509 102.259 -0.301 1.00 58.35 O
ATOM 4 OP2 U A 258 76.504 104.815 -0.067 1.00 56.73 O
ATOM 5 O5' U A 258 77.354 103.345 1.768 1.00 58.68 O
ATOM 6 C5' U A 258 78.032 102.192 2.301 1.00 60.05 C
ATOM 7 C4' U A 258 78.274 102.362 3.782 1.00 60.85 C
ATOM 8 O4' U A 258 79.365 103.306 3.995 1.00 57.99 O
ATOM 9 C3' U A 258 77.081 102.898 4.578 1.00 62.87 C
ATOM 10 O3' U A 258 77.010 102.257 5.852 1.00 69.05 O
ATOM 11 C2' U A 258 77.444 104.370 4.759 1.00 59.83 C
ATOM 12 O2' U A 258 76.826 104.958 5.886 1.00 59.84 O
ATOM 13 C1' U A 258 78.956 104.261 4.947 1.00 56.72 C
ATOM 14 N1 U A 258 79.781 105.477 4.822 1.00 51.95 N
ATOM 15 C2 U A 258 81.124 105.372 5.160 1.00 49.79 C
ATOM 16 O2 U A 258 81.653 104.319 5.475 1.00 49.88 O
ATOM 17 N3 U A 258 81.828 106.548 5.117 1.00 48.67 N
ATOM 18 C4 U A 258 81.351 107.793 4.772 1.00 48.20 C
ATOM 19 O4 U A 258 82.068 108.782 4.959 1.00 48.32 O
ATOM 20 C5 U A 258 79.970 107.816 4.386 1.00 47.80 C
ATOM 21 C6 U A 258 79.251 106.688 4.422 1.00 49.91 C
ATOM 22 P C A 259 75.617 101.611 6.345 1.00 74.29 P
ATOM 23 OP1 C A 259 74.495 102.532 5.996 1.00 72.77 O
ATOM 24 OP2 C A 259 75.808 101.187 7.757 1.00 75.28 O
ATOM 25 O5' C A 259 75.462 100.290 5.467 1.00 76.92 O
TER
ATOM 1 O3' C B 227 76.617 112.204 4.432 1.00 48.51 O
ATOM 2 P C B 228 78.052 111.835 3.816 1.00 50.19 P
ATOM 3 OP1 C B 228 78.252 112.705 2.623 1.00 52.42 O
ATOM 4 OP2 C B 228 78.170 110.360 3.683 1.00 49.53 O
ATOM 5 O5' C B 228 79.067 112.291 4.955 1.00 48.85 O
ATOM 6 C5' C B 228 80.416 111.826 4.963 1.00 45.76 C
ATOM 7 C4' C B 228 81.033 112.063 6.313 1.00 46.56 C
ATOM 8 O4' C B 228 80.362 111.257 7.320 1.00 46.14 O
ATOM 9 C3' C B 228 82.488 111.648 6.400 1.00 46.52 C
ATOM 10 O3' C B 228 83.303 112.721 5.943 1.00 46.55 O
ATOM 11 C2' C B 228 82.676 111.405 7.891 1.00 45.98 C
ATOM 12 O2' C B 228 82.880 112.614 8.593 1.00 48.02 O
ATOM 13 C1' C B 228 81.313 110.818 8.287 1.00 45.31 C
ATOM 14 N1 C B 228 81.248 109.340 8.399 1.00 42.61 N
ATOM 15 C2 C B 228 82.233 108.650 9.153 1.00 42.99 C
ATOM 16 O2 C B 228 83.117 109.296 9.745 1.00 43.18 O
ATOM 17 N3 C B 228 82.180 107.296 9.222 1.00 41.73 N
ATOM 18 C4 C B 228 81.198 106.633 8.597 1.00 41.66 C
ATOM 19 N4 C B 228 81.197 105.302 8.670 1.00 39.97 N
ATOM 20 C5 C B 228 80.176 107.306 7.860 1.00 40.36 C
ATOM 21 C6 C B 228 80.242 108.642 7.783 1.00 42.25 C
ATOM 22 P A B 229 84.674 112.414 5.178 1.00 47.18 P
ATOM 23 OP1 A B 229 85.404 113.710 5.083 1.00 47.56 O
ATOM 24 OP2 A B 229 84.346 111.660 3.941 1.00 47.30 O
ATOM 25 O5' A B 229 85.463 111.438 6.159 1.00 46.92 O
TER
ATOM 2 P U A 258 77.152 103.504 0.198 1.00 57.33 P
ATOM 3 OP1 U A 258 76.509 102.259 -0.301 1.00 58.35 O
ATOM 4 OP2 U A 258 76.504 104.815 -0.067 1.00 56.73 O
ATOM 5 O5' U A 258 77.354 103.345 1.768 1.00 58.68 O
ATOM 6 C5' U A 258 78.032 102.192 2.301 1.00 60.05 C
ATOM 7 C4' U A 258 78.274 102.362 3.782 1.00 60.85 C
ATOM 8 O4' U A 258 79.365 103.306 3.995 1.00 57.99 O
ATOM 9 C3' U A 258 77.081 102.898 4.578 1.00 62.87 C
ATOM 10 O3' U A 258 77.010 102.257 5.852 1.00 69.05 O
ATOM 11 C2' U A 258 77.444 104.370 4.759 1.00 59.83 C
ATOM 12 O2' U A 258 76.826 104.958 5.886 1.00 59.84 O
ATOM 13 C1' U A 258 78.956 104.261 4.947 1.00 56.72 C
ATOM 14 N1 U A 258 79.781 105.477 4.822 1.00 51.95 N
ATOM 15 C2 U A 258 81.124 105.372 5.160 1.00 49.79 C
ATOM 16 O2 U A 258 81.653 104.319 5.475 1.00 49.88 O
ATOM 17 N3 U A 258 81.828 106.548 5.117 1.00 48.67 N
ATOM 18 C4 U A 258 81.351 107.793 4.772 1.00 48.20 C
ATOM 19 O4 U A 258 82.068 108.782 4.959 1.00 48.32 O
ATOM 20 C5 U A 258 79.970 107.816 4.386 1.00 47.80 C
ATOM 21 C6 U A 258 79.251 106.688 4.422 1.00 49.91 C
ATOM 22 P C A 259 75.617 101.611 6.345 1.00 74.29 P
ATOM 23 OP1 C A 259 74.495 102.532 5.996 1.00 72.77 O
ATOM 24 OP2 C A 259 75.808 101.187 7.757 1.00 75.28 O
ATOM 25 O5' C A 259 75.462 100.290 5.467 1.00 76.92 O
TER
ATOM 1 O3' C B 227 76.617 112.204 4.432 1.00 48.51 O
ATOM 2 P C B 228 78.052 111.835 3.816 1.00 50.19 P
ATOM 3 OP1 C B 228 78.252 112.705 2.623 1.00 52.42 O
ATOM 4 OP2 C B 228 78.170 110.360 3.683 1.00 49.53 O
ATOM 5 O5' C B 228 79.067 112.291 4.955 1.00 48.85 O
ATOM 6 C5' C B 228 80.416 111.826 4.963 1.00 45.76 C
ATOM 7 C4' C B 228 81.033 112.063 6.313 1.00 46.56 C
ATOM 8 O4' C B 228 80.362 111.257 7.320 1.00 46.14 O
ATOM 9 C3' C B 228 82.488 111.648 6.400 1.00 46.52 C
ATOM 10 O3' C B 228 83.303 112.721 5.943 1.00 46.55 O
ATOM 11 C2' C B 228 82.676 111.405 7.891 1.00 45.98 C
ATOM 12 O2' C B 228 82.880 112.614 8.593 1.00 48.02 O
ATOM 13 C1' C B 228 81.313 110.818 8.287 1.00 45.31 C
ATOM 14 N1 C B 228 81.248 109.340 8.399 1.00 42.61 N
ATOM 15 C2 C B 228 82.233 108.650 9.153 1.00 42.99 C
ATOM 16 O2 C B 228 83.117 109.296 9.745 1.00 43.18 O
ATOM 17 N3 C B 228 82.180 107.296 9.222 1.00 41.73 N
ATOM 18 C4 C B 228 81.198 106.633 8.597 1.00 41.66 C
ATOM 19 N4 C B 228 81.197 105.302 8.670 1.00 39.97 N
ATOM 20 C5 C B 228 80.176 107.306 7.860 1.00 40.36 C
ATOM 21 C6 C B 228 80.242 108.642 7.783 1.00 42.25 C
ATOM 22 P A B 229 84.674 112.414 5.178 1.00 47.18 P
ATOM 23 OP1 A B 229 85.404 113.710 5.083 1.00 47.56 O
ATOM 24 OP2 A B 229 84.346 111.660 3.941 1.00 47.30 O
ATOM 25 O5' A B 229 85.463 111.438 6.159 1.00 46.92 O
TER
Atoms:
C4: (81.351,107.793,4.772)
N3: (81.828,106.548,5.117)
OP1: (76.509,102.259,-0.301)
OP2: (76.504,104.815,-0.067)
C2: (81.124,105.372,5.160)
C1': (78.956,104.261,4.947)
C3': (77.081,102.898,4.578)
O5': (77.354,103.345,1.768)
O4': (79.365,103.306,3.995)
C5': (78.032,102.192,2.301)
P: (77.152,103.504,0.198)
C4': (78.274,102.362,3.782)
C2': (77.444,104.370,4.759)
O2': (76.826,104.958,5.886)
N1: (79.781,105.477,4.822)
O4: (82.068,108.782,4.959)
O2: (81.653,104.319,5.475)
C6: (79.251,106.688,4.422)
C5: (79.970,107.816,4.386)
O3': (77.010,102.257,5.852)
N3: (81.828,106.548,5.117)
OP1: (76.509,102.259,-0.301)
OP2: (76.504,104.815,-0.067)
C2: (81.124,105.372,5.160)
C1': (78.956,104.261,4.947)
C3': (77.081,102.898,4.578)
O5': (77.354,103.345,1.768)
O4': (79.365,103.306,3.995)
C5': (78.032,102.192,2.301)
P: (77.152,103.504,0.198)
C4': (78.274,102.362,3.782)
C2': (77.444,104.370,4.759)
O2': (76.826,104.958,5.886)
N1: (79.781,105.477,4.822)
O4: (82.068,108.782,4.959)
O2: (81.653,104.319,5.475)
C6: (79.251,106.688,4.422)
C5: (79.970,107.816,4.386)
O3': (77.010,102.257,5.852)
C2: (82.233,108.650,9.153)
OP1: (78.252,112.705,2.623)
OP2: (78.170,110.360,3.683)
C4: (81.198,106.633,8.597)
O5': (79.067,112.291,4.955)
C3': (82.488,111.648,6.400)
C1': (81.313,110.818,8.287)
O4': (80.362,111.257,7.320)
C5': (80.416,111.826,4.963)
P: (78.052,111.835,3.816)
O2: (83.117,109.296,9.745)
C4': (81.033,112.063,6.313)
C2': (82.676,111.405,7.891)
O2': (82.880,112.614,8.593)
N1: (81.248,109.340,8.399)
N3: (82.180,107.296,9.222)
N4: (81.197,105.302,8.670)
C6: (80.242,108.642,7.783)
C5: (80.176,107.306,7.860)
O3': (83.303,112.721,5.943)
OP1: (78.252,112.705,2.623)
OP2: (78.170,110.360,3.683)
C4: (81.198,106.633,8.597)
O5': (79.067,112.291,4.955)
C3': (82.488,111.648,6.400)
C1': (81.313,110.818,8.287)
O4': (80.362,111.257,7.320)
C5': (80.416,111.826,4.963)
P: (78.052,111.835,3.816)
O2: (83.117,109.296,9.745)
C4': (81.033,112.063,6.313)
C2': (82.676,111.405,7.891)
O2': (82.880,112.614,8.593)
N1: (81.248,109.340,8.399)
N3: (82.180,107.296,9.222)
N4: (81.197,105.302,8.670)
C6: (80.242,108.642,7.783)
C5: (80.176,107.306,7.860)
O3': (83.303,112.721,5.943)
Image (generated by PyMOL):