Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ9:0258:0228
Extra
PDB:
ATOM 1 O3' G A 257 78.744 103.618 -0.462 1.00 56.40 O
ATOM 2 P U A 258 77.253 103.589 0.144 1.00 57.18 P
ATOM 3 OP1 U A 258 76.595 102.321 -0.267 1.00 57.93 O
ATOM 4 OP2 U A 258 76.596 104.886 -0.179 1.00 56.62 O
ATOM 5 O5' U A 258 77.510 103.501 1.714 1.00 58.40 O
ATOM 6 C5' U A 258 78.213 102.376 2.275 1.00 60.69 C
ATOM 7 C4' U A 258 78.439 102.573 3.758 1.00 62.19 C
ATOM 8 O4' U A 258 79.505 103.547 3.972 1.00 59.30 O
ATOM 9 C3' U A 258 77.230 103.075 4.551 1.00 64.16 C
ATOM 10 O3' U A 258 77.174 102.436 5.825 1.00 70.86 O
ATOM 11 C2' U A 258 77.553 104.557 4.735 1.00 61.37 C
ATOM 12 O2' U A 258 76.905 105.126 5.857 1.00 61.59 O
ATOM 13 C1' U A 258 79.069 104.493 4.922 1.00 57.83 C
ATOM 14 N1 U A 258 79.851 105.737 4.787 1.00 53.40 N
ATOM 15 C2 U A 258 81.224 105.673 5.028 1.00 51.38 C
ATOM 16 O2 U A 258 81.818 104.634 5.263 1.00 51.19 O
ATOM 17 N3 U A 258 81.879 106.877 4.987 1.00 49.43 N
ATOM 18 C4 U A 258 81.329 108.113 4.736 1.00 48.69 C
ATOM 19 O4 U A 258 82.050 109.113 4.779 1.00 48.19 O
ATOM 20 C5 U A 258 79.926 108.097 4.446 1.00 49.19 C
ATOM 21 C6 U A 258 79.252 106.942 4.476 1.00 51.24 C
ATOM 22 P C A 259 75.770 101.862 6.375 1.00 76.23 P
ATOM 23 OP1 C A 259 74.658 102.763 5.957 1.00 74.62 O
ATOM 24 OP2 C A 259 75.960 101.552 7.817 1.00 78.08 O
ATOM 25 O5' C A 259 75.590 100.471 5.620 1.00 79.96 O
TER
ATOM 1 O3' C B 227 76.756 112.274 4.416 1.00 49.49 O
ATOM 2 P C B 228 78.206 111.926 3.819 1.00 51.51 P
ATOM 3 OP1 C B 228 78.409 112.818 2.642 1.00 52.64 O
ATOM 4 OP2 C B 228 78.337 110.452 3.663 1.00 50.63 O
ATOM 5 O5' C B 228 79.209 112.356 4.982 1.00 49.83 O
ATOM 6 C5' C B 228 80.567 111.904 4.979 1.00 46.27 C
ATOM 7 C4' C B 228 81.197 112.132 6.327 1.00 45.48 C
ATOM 8 O4' C B 228 80.532 111.336 7.343 1.00 43.36 O
ATOM 9 C3' C B 228 82.650 111.704 6.390 1.00 45.77 C
ATOM 10 O3' C B 228 83.451 112.789 5.926 1.00 48.35 O
ATOM 11 C2' C B 228 82.859 111.443 7.878 1.00 44.40 C
ATOM 12 O2' C B 228 83.104 112.633 8.597 1.00 47.52 O
ATOM 13 C1' C B 228 81.489 110.891 8.299 1.00 42.46 C
ATOM 14 N1 C B 228 81.393 109.418 8.432 1.00 39.47 N
ATOM 15 C2 C B 228 82.376 108.709 9.178 1.00 39.80 C
ATOM 16 O2 C B 228 83.278 109.339 9.761 1.00 39.71 O
ATOM 17 N3 C B 228 82.301 107.354 9.243 1.00 38.13 N
ATOM 18 C4 C B 228 81.303 106.710 8.624 1.00 37.64 C
ATOM 19 N4 C B 228 81.285 105.384 8.679 1.00 38.50 N
ATOM 20 C5 C B 228 80.282 107.402 7.908 1.00 37.65 C
ATOM 21 C6 C B 228 80.366 108.738 7.835 1.00 39.07 C
ATOM 22 P A B 229 84.836 112.509 5.162 1.00 50.16 P
ATOM 23 OP1 A B 229 85.549 113.824 5.104 1.00 48.90 O
ATOM 24 OP2 A B 229 84.534 111.779 3.899 1.00 51.22 O
ATOM 25 O5' A B 229 85.626 111.522 6.132 1.00 48.15 O
TER
ATOM 2 P U A 258 77.253 103.589 0.144 1.00 57.18 P
ATOM 3 OP1 U A 258 76.595 102.321 -0.267 1.00 57.93 O
ATOM 4 OP2 U A 258 76.596 104.886 -0.179 1.00 56.62 O
ATOM 5 O5' U A 258 77.510 103.501 1.714 1.00 58.40 O
ATOM 6 C5' U A 258 78.213 102.376 2.275 1.00 60.69 C
ATOM 7 C4' U A 258 78.439 102.573 3.758 1.00 62.19 C
ATOM 8 O4' U A 258 79.505 103.547 3.972 1.00 59.30 O
ATOM 9 C3' U A 258 77.230 103.075 4.551 1.00 64.16 C
ATOM 10 O3' U A 258 77.174 102.436 5.825 1.00 70.86 O
ATOM 11 C2' U A 258 77.553 104.557 4.735 1.00 61.37 C
ATOM 12 O2' U A 258 76.905 105.126 5.857 1.00 61.59 O
ATOM 13 C1' U A 258 79.069 104.493 4.922 1.00 57.83 C
ATOM 14 N1 U A 258 79.851 105.737 4.787 1.00 53.40 N
ATOM 15 C2 U A 258 81.224 105.673 5.028 1.00 51.38 C
ATOM 16 O2 U A 258 81.818 104.634 5.263 1.00 51.19 O
ATOM 17 N3 U A 258 81.879 106.877 4.987 1.00 49.43 N
ATOM 18 C4 U A 258 81.329 108.113 4.736 1.00 48.69 C
ATOM 19 O4 U A 258 82.050 109.113 4.779 1.00 48.19 O
ATOM 20 C5 U A 258 79.926 108.097 4.446 1.00 49.19 C
ATOM 21 C6 U A 258 79.252 106.942 4.476 1.00 51.24 C
ATOM 22 P C A 259 75.770 101.862 6.375 1.00 76.23 P
ATOM 23 OP1 C A 259 74.658 102.763 5.957 1.00 74.62 O
ATOM 24 OP2 C A 259 75.960 101.552 7.817 1.00 78.08 O
ATOM 25 O5' C A 259 75.590 100.471 5.620 1.00 79.96 O
TER
ATOM 1 O3' C B 227 76.756 112.274 4.416 1.00 49.49 O
ATOM 2 P C B 228 78.206 111.926 3.819 1.00 51.51 P
ATOM 3 OP1 C B 228 78.409 112.818 2.642 1.00 52.64 O
ATOM 4 OP2 C B 228 78.337 110.452 3.663 1.00 50.63 O
ATOM 5 O5' C B 228 79.209 112.356 4.982 1.00 49.83 O
ATOM 6 C5' C B 228 80.567 111.904 4.979 1.00 46.27 C
ATOM 7 C4' C B 228 81.197 112.132 6.327 1.00 45.48 C
ATOM 8 O4' C B 228 80.532 111.336 7.343 1.00 43.36 O
ATOM 9 C3' C B 228 82.650 111.704 6.390 1.00 45.77 C
ATOM 10 O3' C B 228 83.451 112.789 5.926 1.00 48.35 O
ATOM 11 C2' C B 228 82.859 111.443 7.878 1.00 44.40 C
ATOM 12 O2' C B 228 83.104 112.633 8.597 1.00 47.52 O
ATOM 13 C1' C B 228 81.489 110.891 8.299 1.00 42.46 C
ATOM 14 N1 C B 228 81.393 109.418 8.432 1.00 39.47 N
ATOM 15 C2 C B 228 82.376 108.709 9.178 1.00 39.80 C
ATOM 16 O2 C B 228 83.278 109.339 9.761 1.00 39.71 O
ATOM 17 N3 C B 228 82.301 107.354 9.243 1.00 38.13 N
ATOM 18 C4 C B 228 81.303 106.710 8.624 1.00 37.64 C
ATOM 19 N4 C B 228 81.285 105.384 8.679 1.00 38.50 N
ATOM 20 C5 C B 228 80.282 107.402 7.908 1.00 37.65 C
ATOM 21 C6 C B 228 80.366 108.738 7.835 1.00 39.07 C
ATOM 22 P A B 229 84.836 112.509 5.162 1.00 50.16 P
ATOM 23 OP1 A B 229 85.549 113.824 5.104 1.00 48.90 O
ATOM 24 OP2 A B 229 84.534 111.779 3.899 1.00 51.22 O
ATOM 25 O5' A B 229 85.626 111.522 6.132 1.00 48.15 O
TER
Atoms:
C4: (81.329,108.113,4.736)
N3: (81.879,106.877,4.987)
OP1: (76.595,102.321,-0.267)
OP2: (76.596,104.886,-0.179)
C2: (81.224,105.673,5.028)
C1': (79.069,104.493,4.922)
C3': (77.230,103.075,4.551)
O5': (77.510,103.501,1.714)
O4': (79.505,103.547,3.972)
C5': (78.213,102.376,2.275)
P: (77.253,103.589,0.144)
C4': (78.439,102.573,3.758)
C2': (77.553,104.557,4.735)
O2': (76.905,105.126,5.857)
N1: (79.851,105.737,4.787)
O4: (82.050,109.113,4.779)
O2: (81.818,104.634,5.263)
C6: (79.252,106.942,4.476)
C5: (79.926,108.097,4.446)
O3': (77.174,102.436,5.825)
N3: (81.879,106.877,4.987)
OP1: (76.595,102.321,-0.267)
OP2: (76.596,104.886,-0.179)
C2: (81.224,105.673,5.028)
C1': (79.069,104.493,4.922)
C3': (77.230,103.075,4.551)
O5': (77.510,103.501,1.714)
O4': (79.505,103.547,3.972)
C5': (78.213,102.376,2.275)
P: (77.253,103.589,0.144)
C4': (78.439,102.573,3.758)
C2': (77.553,104.557,4.735)
O2': (76.905,105.126,5.857)
N1: (79.851,105.737,4.787)
O4: (82.050,109.113,4.779)
O2: (81.818,104.634,5.263)
C6: (79.252,106.942,4.476)
C5: (79.926,108.097,4.446)
O3': (77.174,102.436,5.825)
C2: (82.376,108.709,9.178)
OP1: (78.409,112.818,2.642)
OP2: (78.337,110.452,3.663)
C4: (81.303,106.710,8.624)
O5': (79.209,112.356,4.982)
C3': (82.650,111.704,6.390)
C1': (81.489,110.891,8.299)
O4': (80.532,111.336,7.343)
C5': (80.567,111.904,4.979)
P: (78.206,111.926,3.819)
O2: (83.278,109.339,9.761)
C4': (81.197,112.132,6.327)
C2': (82.859,111.443,7.878)
O2': (83.104,112.633,8.597)
N1: (81.393,109.418,8.432)
N3: (82.301,107.354,9.243)
N4: (81.285,105.384,8.679)
C6: (80.366,108.738,7.835)
C5: (80.282,107.402,7.908)
O3': (83.451,112.789,5.926)
OP1: (78.409,112.818,2.642)
OP2: (78.337,110.452,3.663)
C4: (81.303,106.710,8.624)
O5': (79.209,112.356,4.982)
C3': (82.650,111.704,6.390)
C1': (81.489,110.891,8.299)
O4': (80.532,111.336,7.343)
C5': (80.567,111.904,4.979)
P: (78.206,111.926,3.819)
O2: (83.278,109.339,9.761)
C4': (81.197,112.132,6.327)
C2': (82.859,111.443,7.878)
O2': (83.104,112.633,8.597)
N1: (81.393,109.418,8.432)
N3: (82.301,107.354,9.243)
N4: (81.285,105.384,8.679)
C6: (80.366,108.738,7.835)
C5: (80.282,107.402,7.908)
O3': (83.451,112.789,5.926)
Image (generated by PyMOL):