Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQK:01087:01086
Extra
PDB:
ATOM 1 O3' C A1086 49.676 100.705 115.145 1.00 51.74 O
ATOM 2 P U A1087 48.441 100.335 116.107 1.00 52.02 P
ATOM 3 OP1 U A1087 48.963 100.285 117.492 1.00 53.60 O
ATOM 4 OP2 U A1087 47.755 99.147 115.546 1.00 48.94 O
ATOM 5 O5' U A1087 47.460 101.582 115.992 1.00 50.64 O
ATOM 6 C5' U A1087 47.897 102.896 116.361 1.00 50.85 C
ATOM 7 C4' U A1087 46.757 103.879 116.244 1.00 51.85 C
ATOM 8 O4' U A1087 46.442 104.099 114.840 1.00 51.88 O
ATOM 9 C3' U A1087 45.447 103.468 116.913 1.00 51.80 C
ATOM 10 O3' U A1087 44.823 104.614 117.467 1.00 52.10 O
ATOM 11 C2' U A1087 44.623 102.954 115.739 1.00 51.44 C
ATOM 12 O2' U A1087 43.232 103.038 115.960 1.00 53.28 O
ATOM 13 C1' U A1087 45.057 103.917 114.637 1.00 49.85 C
ATOM 14 N1 U A1087 44.833 103.455 113.258 1.00 48.81 N
ATOM 15 C2 U A1087 44.133 104.302 112.401 1.00 47.60 C
ATOM 16 O2 U A1087 43.711 105.395 112.738 1.00 48.81 O
ATOM 17 N3 U A1087 43.948 103.822 111.134 1.00 46.54 N
ATOM 18 C4 U A1087 44.372 102.615 110.633 1.00 48.44 C
ATOM 19 O4 U A1087 44.119 102.331 109.459 1.00 49.24 O
ATOM 20 C5 U A1087 45.088 101.790 111.570 1.00 48.66 C
ATOM 21 C6 U A1087 45.289 102.228 112.818 1.00 48.78 C
ATOM 22 P C A1088 44.937 104.891 119.046 1.00 55.49 P
ATOM 23 OP1 C A1088 44.340 106.238 119.321 1.00 54.59 O
ATOM 24 OP2 C A1088 46.349 104.625 119.438 1.00 54.31 O
ATOM 25 O5' C A1088 44.018 103.759 119.699 1.00 53.48 O
TER
ATOM 1 O3' C B1085 45.666 98.327 111.712 1.00 52.68 O
ATOM 2 P C B1086 47.142 98.409 111.082 1.00 54.81 P
ATOM 3 OP1 C B1086 47.053 99.247 109.859 1.00 55.83 O
ATOM 4 OP2 C B1086 47.689 97.027 110.988 1.00 54.29 O
ATOM 5 O5' C B1086 47.973 99.217 112.172 1.00 52.41 O
ATOM 6 C5' C B1086 49.327 98.854 112.498 1.00 51.02 C
ATOM 7 C4' C B1086 50.122 100.091 112.823 1.00 51.43 C
ATOM 8 O4' C B1086 50.329 100.858 111.606 1.00 51.52 O
ATOM 9 C3' C B1086 49.444 101.061 113.782 1.00 51.72 C
ATOM 10 O3' C B1086 49.676 100.705 115.145 1.00 51.74 O
ATOM 11 C2' C B1086 50.110 102.382 113.421 1.00 52.55 C
ATOM 12 O2' C B1086 51.392 102.520 114.005 1.00 54.83 O
ATOM 13 C1' C B1086 50.268 102.243 111.901 1.00 51.97 C
ATOM 14 N1 C B1086 49.176 102.848 111.107 1.00 51.24 N
ATOM 15 C2 C B1086 48.859 104.200 111.306 1.00 51.82 C
ATOM 16 O2 C B1086 49.509 104.858 112.135 1.00 54.18 O
ATOM 17 N3 C B1086 47.860 104.756 110.586 1.00 51.24 N
ATOM 18 C4 C B1086 47.199 104.028 109.688 1.00 50.79 C
ATOM 19 N4 C B1086 46.236 104.629 108.991 1.00 50.61 N
ATOM 20 C5 C B1086 47.501 102.654 109.462 1.00 51.22 C
ATOM 21 C6 C B1086 48.483 102.109 110.188 1.00 51.00 C
ATOM 22 P U B1087 48.441 100.335 116.107 1.00 52.02 P
ATOM 23 OP1 U B1087 48.963 100.285 117.492 1.00 53.60 O
ATOM 24 OP2 U B1087 47.755 99.147 115.546 1.00 48.94 O
ATOM 25 O5' U B1087 47.460 101.582 115.992 1.00 50.64 O
TER
ATOM 2 P U A1087 48.441 100.335 116.107 1.00 52.02 P
ATOM 3 OP1 U A1087 48.963 100.285 117.492 1.00 53.60 O
ATOM 4 OP2 U A1087 47.755 99.147 115.546 1.00 48.94 O
ATOM 5 O5' U A1087 47.460 101.582 115.992 1.00 50.64 O
ATOM 6 C5' U A1087 47.897 102.896 116.361 1.00 50.85 C
ATOM 7 C4' U A1087 46.757 103.879 116.244 1.00 51.85 C
ATOM 8 O4' U A1087 46.442 104.099 114.840 1.00 51.88 O
ATOM 9 C3' U A1087 45.447 103.468 116.913 1.00 51.80 C
ATOM 10 O3' U A1087 44.823 104.614 117.467 1.00 52.10 O
ATOM 11 C2' U A1087 44.623 102.954 115.739 1.00 51.44 C
ATOM 12 O2' U A1087 43.232 103.038 115.960 1.00 53.28 O
ATOM 13 C1' U A1087 45.057 103.917 114.637 1.00 49.85 C
ATOM 14 N1 U A1087 44.833 103.455 113.258 1.00 48.81 N
ATOM 15 C2 U A1087 44.133 104.302 112.401 1.00 47.60 C
ATOM 16 O2 U A1087 43.711 105.395 112.738 1.00 48.81 O
ATOM 17 N3 U A1087 43.948 103.822 111.134 1.00 46.54 N
ATOM 18 C4 U A1087 44.372 102.615 110.633 1.00 48.44 C
ATOM 19 O4 U A1087 44.119 102.331 109.459 1.00 49.24 O
ATOM 20 C5 U A1087 45.088 101.790 111.570 1.00 48.66 C
ATOM 21 C6 U A1087 45.289 102.228 112.818 1.00 48.78 C
ATOM 22 P C A1088 44.937 104.891 119.046 1.00 55.49 P
ATOM 23 OP1 C A1088 44.340 106.238 119.321 1.00 54.59 O
ATOM 24 OP2 C A1088 46.349 104.625 119.438 1.00 54.31 O
ATOM 25 O5' C A1088 44.018 103.759 119.699 1.00 53.48 O
TER
ATOM 1 O3' C B1085 45.666 98.327 111.712 1.00 52.68 O
ATOM 2 P C B1086 47.142 98.409 111.082 1.00 54.81 P
ATOM 3 OP1 C B1086 47.053 99.247 109.859 1.00 55.83 O
ATOM 4 OP2 C B1086 47.689 97.027 110.988 1.00 54.29 O
ATOM 5 O5' C B1086 47.973 99.217 112.172 1.00 52.41 O
ATOM 6 C5' C B1086 49.327 98.854 112.498 1.00 51.02 C
ATOM 7 C4' C B1086 50.122 100.091 112.823 1.00 51.43 C
ATOM 8 O4' C B1086 50.329 100.858 111.606 1.00 51.52 O
ATOM 9 C3' C B1086 49.444 101.061 113.782 1.00 51.72 C
ATOM 10 O3' C B1086 49.676 100.705 115.145 1.00 51.74 O
ATOM 11 C2' C B1086 50.110 102.382 113.421 1.00 52.55 C
ATOM 12 O2' C B1086 51.392 102.520 114.005 1.00 54.83 O
ATOM 13 C1' C B1086 50.268 102.243 111.901 1.00 51.97 C
ATOM 14 N1 C B1086 49.176 102.848 111.107 1.00 51.24 N
ATOM 15 C2 C B1086 48.859 104.200 111.306 1.00 51.82 C
ATOM 16 O2 C B1086 49.509 104.858 112.135 1.00 54.18 O
ATOM 17 N3 C B1086 47.860 104.756 110.586 1.00 51.24 N
ATOM 18 C4 C B1086 47.199 104.028 109.688 1.00 50.79 C
ATOM 19 N4 C B1086 46.236 104.629 108.991 1.00 50.61 N
ATOM 20 C5 C B1086 47.501 102.654 109.462 1.00 51.22 C
ATOM 21 C6 C B1086 48.483 102.109 110.188 1.00 51.00 C
ATOM 22 P U B1087 48.441 100.335 116.107 1.00 52.02 P
ATOM 23 OP1 U B1087 48.963 100.285 117.492 1.00 53.60 O
ATOM 24 OP2 U B1087 47.755 99.147 115.546 1.00 48.94 O
ATOM 25 O5' U B1087 47.460 101.582 115.992 1.00 50.64 O
TER
Atoms:
C4: (44.372,102.615,110.633)
N3: (43.948,103.822,111.134)
OP1: (48.963,100.285,117.492)
OP2: (47.755,99.147,115.546)
C2: (44.133,104.302,112.401)
C1': (45.057,103.917,114.637)
C3': (45.447,103.468,116.913)
O5': (47.460,101.582,115.992)
O4': (46.442,104.099,114.840)
C5': (47.897,102.896,116.361)
P: (48.441,100.335,116.107)
C4': (46.757,103.879,116.244)
C2': (44.623,102.954,115.739)
O2': (43.232,103.038,115.960)
N1: (44.833,103.455,113.258)
O4: (44.119,102.331,109.459)
O2: (43.711,105.395,112.738)
C6: (45.289,102.228,112.818)
C5: (45.088,101.790,111.570)
O3': (44.823,104.614,117.467)
N3: (43.948,103.822,111.134)
OP1: (48.963,100.285,117.492)
OP2: (47.755,99.147,115.546)
C2: (44.133,104.302,112.401)
C1': (45.057,103.917,114.637)
C3': (45.447,103.468,116.913)
O5': (47.460,101.582,115.992)
O4': (46.442,104.099,114.840)
C5': (47.897,102.896,116.361)
P: (48.441,100.335,116.107)
C4': (46.757,103.879,116.244)
C2': (44.623,102.954,115.739)
O2': (43.232,103.038,115.960)
N1: (44.833,103.455,113.258)
O4: (44.119,102.331,109.459)
O2: (43.711,105.395,112.738)
C6: (45.289,102.228,112.818)
C5: (45.088,101.790,111.570)
O3': (44.823,104.614,117.467)
C2: (48.859,104.200,111.306)
OP1: (47.053,99.247,109.859)
OP2: (47.689,97.027,110.988)
C4: (47.199,104.028,109.688)
O5': (47.973,99.217,112.172)
C3': (49.444,101.061,113.782)
C1': (50.268,102.243,111.901)
O4': (50.329,100.858,111.606)
C5': (49.327,98.854,112.498)
P: (47.142,98.409,111.082)
O2: (49.509,104.858,112.135)
C4': (50.122,100.091,112.823)
C2': (50.110,102.382,113.421)
O2': (51.392,102.520,114.005)
N1: (49.176,102.848,111.107)
N3: (47.860,104.756,110.586)
N4: (46.236,104.629,108.991)
C6: (48.483,102.109,110.188)
C5: (47.501,102.654,109.462)
O3': (49.676,100.705,115.145)
OP1: (47.053,99.247,109.859)
OP2: (47.689,97.027,110.988)
C4: (47.199,104.028,109.688)
O5': (47.973,99.217,112.172)
C3': (49.444,101.061,113.782)
C1': (50.268,102.243,111.901)
O4': (50.329,100.858,111.606)
C5': (49.327,98.854,112.498)
P: (47.142,98.409,111.082)
O2: (49.509,104.858,112.135)
C4': (50.122,100.091,112.823)
C2': (50.110,102.382,113.421)
O2': (51.392,102.520,114.005)
N1: (49.176,102.848,111.107)
N3: (47.860,104.756,110.586)
N4: (46.236,104.629,108.991)
C6: (48.483,102.109,110.188)
C5: (47.501,102.654,109.462)
O3': (49.676,100.705,115.145)
Image (generated by PyMOL):