Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ5:0272:0273
Extra
PDB:
ATOM 1 O3' U A 271 64.887 104.358 -8.132 1.00152.62 O
ATOM 2 P C A 272 63.533 103.513 -7.908 1.00152.83 P
ATOM 3 OP1 C A 272 63.943 102.103 -7.670 1.00152.74 O
ATOM 4 OP2 C A 272 62.572 103.823 -8.998 1.00152.68 O
ATOM 5 O5' C A 272 62.940 104.090 -6.547 1.00151.48 O
ATOM 6 C5' C A 272 63.727 104.955 -5.712 1.00149.27 C
ATOM 7 C4' C A 272 63.165 106.356 -5.736 1.00147.81 C
ATOM 8 O4' C A 272 63.211 106.885 -7.093 1.00147.87 O
ATOM 9 C3' C A 272 61.717 106.499 -5.276 1.00146.40 C
ATOM 10 O3' C A 272 61.581 107.764 -4.639 1.00143.71 O
ATOM 11 C2' C A 272 60.955 106.510 -6.599 1.00146.78 C
ATOM 12 O2' C A 272 59.692 107.142 -6.516 1.00146.96 O
ATOM 13 C1' C A 272 61.918 107.312 -7.476 1.00147.23 C
ATOM 14 N1 C A 272 61.785 107.176 -8.944 1.00147.15 N
ATOM 15 C2 C A 272 62.451 108.103 -9.769 1.00146.99 C
ATOM 16 O2 C A 272 63.130 109.004 -9.248 1.00146.64 O
ATOM 17 N3 C A 272 62.336 107.994 -11.111 1.00146.93 N
ATOM 18 C4 C A 272 61.601 107.015 -11.642 1.00147.02 C
ATOM 19 N4 C A 272 61.521 106.945 -12.972 1.00146.77 N
ATOM 20 C5 C A 272 60.916 106.061 -10.833 1.00146.90 C
ATOM 21 C6 C A 272 61.033 106.177 -9.504 1.00147.00 C
ATOM 22 P A A 273 62.062 107.952 -3.117 1.00142.11 P
ATOM 23 OP1 A A 273 60.889 107.706 -2.234 1.00142.23 O
ATOM 24 OP2 A A 273 62.775 109.255 -3.048 1.00142.15 O
ATOM 25 O5' A A 273 63.140 106.798 -2.887 1.00139.11 O
TER
ATOM 1 O3' C B 272 61.581 107.764 -4.639 1.00143.71 O
ATOM 2 P A B 273 62.062 107.952 -3.117 1.00142.11 P
ATOM 3 OP1 A B 273 60.889 107.706 -2.234 1.00142.23 O
ATOM 4 OP2 A B 273 62.775 109.255 -3.048 1.00142.15 O
ATOM 5 O5' A B 273 63.140 106.798 -2.887 1.00139.11 O
ATOM 6 C5' A B 273 62.898 105.719 -1.959 1.00133.76 C
ATOM 7 C4' A B 273 64.167 105.375 -1.210 1.00129.88 C
ATOM 8 O4' A B 273 65.181 104.946 -2.160 1.00128.35 O
ATOM 9 C3' A B 273 64.826 106.523 -0.460 1.00127.68 C
ATOM 10 O3' A B 273 64.228 106.749 0.816 1.00126.49 O
ATOM 11 C2' A B 273 66.269 106.047 -0.359 1.00126.63 C
ATOM 12 O2' A B 273 66.455 105.079 0.655 1.00125.32 O
ATOM 13 C1' A B 273 66.461 105.390 -1.730 1.00126.14 C
ATOM 14 N9 A B 273 66.997 106.305 -2.746 1.00124.19 N
ATOM 15 C8 A B 273 66.312 106.922 -3.769 1.00123.40 C
ATOM 16 N7 A B 273 67.060 107.696 -4.516 1.00122.41 N
ATOM 17 C5 A B 273 68.324 107.584 -3.952 1.00121.83 C
ATOM 18 C6 A B 273 69.562 108.167 -4.283 1.00121.01 C
ATOM 19 N6 A B 273 69.735 109.015 -5.298 1.00120.27 N
ATOM 20 N1 A B 273 70.629 107.846 -3.522 1.00120.57 N
ATOM 21 C2 A B 273 70.454 107.001 -2.499 1.00120.77 C
ATOM 22 N3 A B 273 69.345 106.394 -2.086 1.00121.51 N
ATOM 23 C4 A B 273 68.301 106.730 -2.864 1.00122.46 C
ATOM 24 P U B 274 64.073 108.254 1.375 1.00125.58 P
ATOM 25 OP1 U B 274 63.389 108.198 2.695 1.00125.54 O
ATOM 26 OP2 U B 274 63.500 109.093 0.289 1.00125.31 O
ATOM 27 O5' U B 274 65.570 108.734 1.621 1.00122.71 O
TER
ATOM 2 P C A 272 63.533 103.513 -7.908 1.00152.83 P
ATOM 3 OP1 C A 272 63.943 102.103 -7.670 1.00152.74 O
ATOM 4 OP2 C A 272 62.572 103.823 -8.998 1.00152.68 O
ATOM 5 O5' C A 272 62.940 104.090 -6.547 1.00151.48 O
ATOM 6 C5' C A 272 63.727 104.955 -5.712 1.00149.27 C
ATOM 7 C4' C A 272 63.165 106.356 -5.736 1.00147.81 C
ATOM 8 O4' C A 272 63.211 106.885 -7.093 1.00147.87 O
ATOM 9 C3' C A 272 61.717 106.499 -5.276 1.00146.40 C
ATOM 10 O3' C A 272 61.581 107.764 -4.639 1.00143.71 O
ATOM 11 C2' C A 272 60.955 106.510 -6.599 1.00146.78 C
ATOM 12 O2' C A 272 59.692 107.142 -6.516 1.00146.96 O
ATOM 13 C1' C A 272 61.918 107.312 -7.476 1.00147.23 C
ATOM 14 N1 C A 272 61.785 107.176 -8.944 1.00147.15 N
ATOM 15 C2 C A 272 62.451 108.103 -9.769 1.00146.99 C
ATOM 16 O2 C A 272 63.130 109.004 -9.248 1.00146.64 O
ATOM 17 N3 C A 272 62.336 107.994 -11.111 1.00146.93 N
ATOM 18 C4 C A 272 61.601 107.015 -11.642 1.00147.02 C
ATOM 19 N4 C A 272 61.521 106.945 -12.972 1.00146.77 N
ATOM 20 C5 C A 272 60.916 106.061 -10.833 1.00146.90 C
ATOM 21 C6 C A 272 61.033 106.177 -9.504 1.00147.00 C
ATOM 22 P A A 273 62.062 107.952 -3.117 1.00142.11 P
ATOM 23 OP1 A A 273 60.889 107.706 -2.234 1.00142.23 O
ATOM 24 OP2 A A 273 62.775 109.255 -3.048 1.00142.15 O
ATOM 25 O5' A A 273 63.140 106.798 -2.887 1.00139.11 O
TER
ATOM 1 O3' C B 272 61.581 107.764 -4.639 1.00143.71 O
ATOM 2 P A B 273 62.062 107.952 -3.117 1.00142.11 P
ATOM 3 OP1 A B 273 60.889 107.706 -2.234 1.00142.23 O
ATOM 4 OP2 A B 273 62.775 109.255 -3.048 1.00142.15 O
ATOM 5 O5' A B 273 63.140 106.798 -2.887 1.00139.11 O
ATOM 6 C5' A B 273 62.898 105.719 -1.959 1.00133.76 C
ATOM 7 C4' A B 273 64.167 105.375 -1.210 1.00129.88 C
ATOM 8 O4' A B 273 65.181 104.946 -2.160 1.00128.35 O
ATOM 9 C3' A B 273 64.826 106.523 -0.460 1.00127.68 C
ATOM 10 O3' A B 273 64.228 106.749 0.816 1.00126.49 O
ATOM 11 C2' A B 273 66.269 106.047 -0.359 1.00126.63 C
ATOM 12 O2' A B 273 66.455 105.079 0.655 1.00125.32 O
ATOM 13 C1' A B 273 66.461 105.390 -1.730 1.00126.14 C
ATOM 14 N9 A B 273 66.997 106.305 -2.746 1.00124.19 N
ATOM 15 C8 A B 273 66.312 106.922 -3.769 1.00123.40 C
ATOM 16 N7 A B 273 67.060 107.696 -4.516 1.00122.41 N
ATOM 17 C5 A B 273 68.324 107.584 -3.952 1.00121.83 C
ATOM 18 C6 A B 273 69.562 108.167 -4.283 1.00121.01 C
ATOM 19 N6 A B 273 69.735 109.015 -5.298 1.00120.27 N
ATOM 20 N1 A B 273 70.629 107.846 -3.522 1.00120.57 N
ATOM 21 C2 A B 273 70.454 107.001 -2.499 1.00120.77 C
ATOM 22 N3 A B 273 69.345 106.394 -2.086 1.00121.51 N
ATOM 23 C4 A B 273 68.301 106.730 -2.864 1.00122.46 C
ATOM 24 P U B 274 64.073 108.254 1.375 1.00125.58 P
ATOM 25 OP1 U B 274 63.389 108.198 2.695 1.00125.54 O
ATOM 26 OP2 U B 274 63.500 109.093 0.289 1.00125.31 O
ATOM 27 O5' U B 274 65.570 108.734 1.621 1.00122.71 O
TER
Atoms:
C2: (62.451,108.103,-9.769)
OP1: (63.943,102.103,-7.670)
OP2: (62.572,103.823,-8.998)
C4: (61.601,107.015,-11.642)
O5': (62.940,104.090,-6.547)
C3': (61.717,106.499,-5.276)
C1': (61.918,107.312,-7.476)
O4': (63.211,106.885,-7.093)
C5': (63.727,104.955,-5.712)
P: (63.533,103.513,-7.908)
O2: (63.130,109.004,-9.248)
C4': (63.165,106.356,-5.736)
C2': (60.955,106.510,-6.599)
O2': (59.692,107.142,-6.516)
N1: (61.785,107.176,-8.944)
N3: (62.336,107.994,-11.111)
N4: (61.521,106.945,-12.972)
C6: (61.033,106.177,-9.504)
C5: (60.916,106.061,-10.833)
O3': (61.581,107.764,-4.639)
OP1: (63.943,102.103,-7.670)
OP2: (62.572,103.823,-8.998)
C4: (61.601,107.015,-11.642)
O5': (62.940,104.090,-6.547)
C3': (61.717,106.499,-5.276)
C1': (61.918,107.312,-7.476)
O4': (63.211,106.885,-7.093)
C5': (63.727,104.955,-5.712)
P: (63.533,103.513,-7.908)
O2: (63.130,109.004,-9.248)
C4': (63.165,106.356,-5.736)
C2': (60.955,106.510,-6.599)
O2': (59.692,107.142,-6.516)
N1: (61.785,107.176,-8.944)
N3: (62.336,107.994,-11.111)
N4: (61.521,106.945,-12.972)
C6: (61.033,106.177,-9.504)
C5: (60.916,106.061,-10.833)
O3': (61.581,107.764,-4.639)
OP1: (60.889,107.706,-2.234)
OP2: (62.775,109.255,-3.048)
C3': (64.826,106.523,-0.460)
C1': (66.461,105.390,-1.730)
C5': (62.898,105.719,-1.959)
O4': (65.181,104.946,-2.160)
C8: (66.312,106.922,-3.769)
O2': (66.455,105.079,0.655)
C6: (69.562,108.167,-4.283)
C5: (68.324,107.584,-3.952)
C4: (68.301,106.730,-2.864)
P: (62.062,107.952,-3.117)
C4': (64.167,105.375,-1.210)
C2': (66.269,106.047,-0.359)
C2: (70.454,107.001,-2.499)
N1: (70.629,107.846,-3.522)
N3: (69.345,106.394,-2.086)
N6: (69.735,109.015,-5.298)
N7: (67.060,107.696,-4.516)
N9: (66.997,106.305,-2.746)
O5': (63.140,106.798,-2.887)
O3': (64.228,106.749,0.816)
OP2: (62.775,109.255,-3.048)
C3': (64.826,106.523,-0.460)
C1': (66.461,105.390,-1.730)
C5': (62.898,105.719,-1.959)
O4': (65.181,104.946,-2.160)
C8: (66.312,106.922,-3.769)
O2': (66.455,105.079,0.655)
C6: (69.562,108.167,-4.283)
C5: (68.324,107.584,-3.952)
C4: (68.301,106.730,-2.864)
P: (62.062,107.952,-3.117)
C4': (64.167,105.375,-1.210)
C2': (66.269,106.047,-0.359)
C2: (70.454,107.001,-2.499)
N1: (70.629,107.846,-3.522)
N3: (69.345,106.394,-2.086)
N6: (69.735,109.015,-5.298)
N7: (67.060,107.696,-4.516)
N9: (66.997,106.305,-2.746)
O5': (63.140,106.798,-2.887)
O3': (64.228,106.749,0.816)
Image (generated by PyMOL):