Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQK:0258:0228
Extra
PDB:
ATOM 1 O3' G A 257 78.847 103.625 -0.369 1.00 59.56 O
ATOM 2 P U A 258 77.363 103.552 0.239 1.00 60.67 P
ATOM 3 OP1 U A 258 76.742 102.276 -0.207 1.00 61.72 O
ATOM 4 OP2 U A 258 76.668 104.836 -0.036 1.00 59.99 O
ATOM 5 O5' U A 258 77.626 103.435 1.802 1.00 62.15 O
ATOM 6 C5' U A 258 78.332 102.303 2.336 1.00 63.31 C
ATOM 7 C4' U A 258 78.562 102.476 3.817 1.00 64.08 C
ATOM 8 O4' U A 258 79.614 103.462 4.037 1.00 61.02 O
ATOM 9 C3' U A 258 77.347 102.957 4.611 1.00 66.09 C
ATOM 10 O3' U A 258 77.284 102.295 5.874 1.00 73.89 O
ATOM 11 C2' U A 258 77.653 104.439 4.813 1.00 62.55 C
ATOM 12 O2' U A 258 77.011 104.989 5.948 1.00 61.50 O
ATOM 13 C1' U A 258 79.169 104.393 4.994 1.00 59.02 C
ATOM 14 N1 U A 258 79.932 105.650 4.861 1.00 53.78 N
ATOM 15 C2 U A 258 81.271 105.636 5.249 1.00 51.10 C
ATOM 16 O2 U A 258 81.850 104.626 5.602 1.00 48.62 O
ATOM 17 N3 U A 258 81.904 106.853 5.204 1.00 49.86 N
ATOM 18 C4 U A 258 81.358 108.060 4.820 1.00 51.71 C
ATOM 19 O4 U A 258 82.048 109.084 4.879 1.00 52.49 O
ATOM 20 C5 U A 258 79.996 107.988 4.381 1.00 51.28 C
ATOM 21 C6 U A 258 79.346 106.817 4.413 1.00 52.19 C
ATOM 22 P C A 259 75.873 101.730 6.412 1.00 80.45 P
ATOM 23 OP1 C A 259 74.783 102.666 6.024 1.00 78.95 O
ATOM 24 OP2 C A 259 76.060 101.377 7.841 1.00 81.57 O
ATOM 25 O5' C A 259 75.656 100.372 5.608 1.00 84.45 O
TER
ATOM 1 O3' C B 227 76.671 112.310 4.452 1.00 49.77 O
ATOM 2 P C B 228 78.105 111.963 3.820 1.00 51.98 P
ATOM 3 OP1 C B 228 78.254 112.813 2.614 1.00 55.66 O
ATOM 4 OP2 C B 228 78.256 110.488 3.707 1.00 50.38 O
ATOM 5 O5' C B 228 79.135 112.466 4.926 1.00 51.17 O
ATOM 6 C5' C B 228 80.482 111.989 4.946 1.00 48.64 C
ATOM 7 C4' C B 228 81.098 112.228 6.298 1.00 48.93 C
ATOM 8 O4' C B 228 80.421 111.427 7.303 1.00 48.52 O
ATOM 9 C3' C B 228 82.550 111.802 6.393 1.00 49.36 C
ATOM 10 O3' C B 228 83.385 112.857 5.928 1.00 48.99 O
ATOM 11 C2' C B 228 82.734 111.564 7.885 1.00 48.78 C
ATOM 12 O2' C B 228 82.962 112.766 8.589 1.00 50.26 O
ATOM 13 C1' C B 228 81.364 110.996 8.280 1.00 48.70 C
ATOM 14 N1 C B 228 81.299 109.519 8.418 1.00 46.96 N
ATOM 15 C2 C B 228 82.274 108.858 9.200 1.00 47.15 C
ATOM 16 O2 C B 228 83.142 109.527 9.781 1.00 47.22 O
ATOM 17 N3 C B 228 82.234 107.507 9.304 1.00 46.04 N
ATOM 18 C4 C B 228 81.275 106.817 8.674 1.00 45.45 C
ATOM 19 N4 C B 228 81.295 105.492 8.776 1.00 43.11 N
ATOM 20 C5 C B 228 80.259 107.461 7.902 1.00 43.84 C
ATOM 21 C6 C B 228 80.311 108.797 7.799 1.00 46.68 C
ATOM 22 P A B 229 84.779 112.521 5.216 1.00 48.35 P
ATOM 23 OP1 A B 229 85.543 113.800 5.162 1.00 51.00 O
ATOM 24 OP2 A B 229 84.479 111.788 3.967 1.00 50.92 O
ATOM 25 O5' A B 229 85.523 111.524 6.208 1.00 48.13 O
TER
ATOM 2 P U A 258 77.363 103.552 0.239 1.00 60.67 P
ATOM 3 OP1 U A 258 76.742 102.276 -0.207 1.00 61.72 O
ATOM 4 OP2 U A 258 76.668 104.836 -0.036 1.00 59.99 O
ATOM 5 O5' U A 258 77.626 103.435 1.802 1.00 62.15 O
ATOM 6 C5' U A 258 78.332 102.303 2.336 1.00 63.31 C
ATOM 7 C4' U A 258 78.562 102.476 3.817 1.00 64.08 C
ATOM 8 O4' U A 258 79.614 103.462 4.037 1.00 61.02 O
ATOM 9 C3' U A 258 77.347 102.957 4.611 1.00 66.09 C
ATOM 10 O3' U A 258 77.284 102.295 5.874 1.00 73.89 O
ATOM 11 C2' U A 258 77.653 104.439 4.813 1.00 62.55 C
ATOM 12 O2' U A 258 77.011 104.989 5.948 1.00 61.50 O
ATOM 13 C1' U A 258 79.169 104.393 4.994 1.00 59.02 C
ATOM 14 N1 U A 258 79.932 105.650 4.861 1.00 53.78 N
ATOM 15 C2 U A 258 81.271 105.636 5.249 1.00 51.10 C
ATOM 16 O2 U A 258 81.850 104.626 5.602 1.00 48.62 O
ATOM 17 N3 U A 258 81.904 106.853 5.204 1.00 49.86 N
ATOM 18 C4 U A 258 81.358 108.060 4.820 1.00 51.71 C
ATOM 19 O4 U A 258 82.048 109.084 4.879 1.00 52.49 O
ATOM 20 C5 U A 258 79.996 107.988 4.381 1.00 51.28 C
ATOM 21 C6 U A 258 79.346 106.817 4.413 1.00 52.19 C
ATOM 22 P C A 259 75.873 101.730 6.412 1.00 80.45 P
ATOM 23 OP1 C A 259 74.783 102.666 6.024 1.00 78.95 O
ATOM 24 OP2 C A 259 76.060 101.377 7.841 1.00 81.57 O
ATOM 25 O5' C A 259 75.656 100.372 5.608 1.00 84.45 O
TER
ATOM 1 O3' C B 227 76.671 112.310 4.452 1.00 49.77 O
ATOM 2 P C B 228 78.105 111.963 3.820 1.00 51.98 P
ATOM 3 OP1 C B 228 78.254 112.813 2.614 1.00 55.66 O
ATOM 4 OP2 C B 228 78.256 110.488 3.707 1.00 50.38 O
ATOM 5 O5' C B 228 79.135 112.466 4.926 1.00 51.17 O
ATOM 6 C5' C B 228 80.482 111.989 4.946 1.00 48.64 C
ATOM 7 C4' C B 228 81.098 112.228 6.298 1.00 48.93 C
ATOM 8 O4' C B 228 80.421 111.427 7.303 1.00 48.52 O
ATOM 9 C3' C B 228 82.550 111.802 6.393 1.00 49.36 C
ATOM 10 O3' C B 228 83.385 112.857 5.928 1.00 48.99 O
ATOM 11 C2' C B 228 82.734 111.564 7.885 1.00 48.78 C
ATOM 12 O2' C B 228 82.962 112.766 8.589 1.00 50.26 O
ATOM 13 C1' C B 228 81.364 110.996 8.280 1.00 48.70 C
ATOM 14 N1 C B 228 81.299 109.519 8.418 1.00 46.96 N
ATOM 15 C2 C B 228 82.274 108.858 9.200 1.00 47.15 C
ATOM 16 O2 C B 228 83.142 109.527 9.781 1.00 47.22 O
ATOM 17 N3 C B 228 82.234 107.507 9.304 1.00 46.04 N
ATOM 18 C4 C B 228 81.275 106.817 8.674 1.00 45.45 C
ATOM 19 N4 C B 228 81.295 105.492 8.776 1.00 43.11 N
ATOM 20 C5 C B 228 80.259 107.461 7.902 1.00 43.84 C
ATOM 21 C6 C B 228 80.311 108.797 7.799 1.00 46.68 C
ATOM 22 P A B 229 84.779 112.521 5.216 1.00 48.35 P
ATOM 23 OP1 A B 229 85.543 113.800 5.162 1.00 51.00 O
ATOM 24 OP2 A B 229 84.479 111.788 3.967 1.00 50.92 O
ATOM 25 O5' A B 229 85.523 111.524 6.208 1.00 48.13 O
TER
Atoms:
C4: (81.358,108.060,4.820)
N3: (81.904,106.853,5.204)
OP1: (76.742,102.276,-0.207)
OP2: (76.668,104.836,-0.036)
C2: (81.271,105.636,5.249)
C1': (79.169,104.393,4.994)
C3': (77.347,102.957,4.611)
O5': (77.626,103.435,1.802)
O4': (79.614,103.462,4.037)
C5': (78.332,102.303,2.336)
P: (77.363,103.552,0.239)
C4': (78.562,102.476,3.817)
C2': (77.653,104.439,4.813)
O2': (77.011,104.989,5.948)
N1: (79.932,105.650,4.861)
O4: (82.048,109.084,4.879)
O2: (81.850,104.626,5.602)
C6: (79.346,106.817,4.413)
C5: (79.996,107.988,4.381)
O3': (77.284,102.295,5.874)
N3: (81.904,106.853,5.204)
OP1: (76.742,102.276,-0.207)
OP2: (76.668,104.836,-0.036)
C2: (81.271,105.636,5.249)
C1': (79.169,104.393,4.994)
C3': (77.347,102.957,4.611)
O5': (77.626,103.435,1.802)
O4': (79.614,103.462,4.037)
C5': (78.332,102.303,2.336)
P: (77.363,103.552,0.239)
C4': (78.562,102.476,3.817)
C2': (77.653,104.439,4.813)
O2': (77.011,104.989,5.948)
N1: (79.932,105.650,4.861)
O4: (82.048,109.084,4.879)
O2: (81.850,104.626,5.602)
C6: (79.346,106.817,4.413)
C5: (79.996,107.988,4.381)
O3': (77.284,102.295,5.874)
C2: (82.274,108.858,9.200)
OP1: (78.254,112.813,2.614)
OP2: (78.256,110.488,3.707)
C4: (81.275,106.817,8.674)
O5': (79.135,112.466,4.926)
C3': (82.550,111.802,6.393)
C1': (81.364,110.996,8.280)
O4': (80.421,111.427,7.303)
C5': (80.482,111.989,4.946)
P: (78.105,111.963,3.820)
O2: (83.142,109.527,9.781)
C4': (81.098,112.228,6.298)
C2': (82.734,111.564,7.885)
O2': (82.962,112.766,8.589)
N1: (81.299,109.519,8.418)
N3: (82.234,107.507,9.304)
N4: (81.295,105.492,8.776)
C6: (80.311,108.797,7.799)
C5: (80.259,107.461,7.902)
O3': (83.385,112.857,5.928)
OP1: (78.254,112.813,2.614)
OP2: (78.256,110.488,3.707)
C4: (81.275,106.817,8.674)
O5': (79.135,112.466,4.926)
C3': (82.550,111.802,6.393)
C1': (81.364,110.996,8.280)
O4': (80.421,111.427,7.303)
C5': (80.482,111.989,4.946)
P: (78.105,111.963,3.820)
O2: (83.142,109.527,9.781)
C4': (81.098,112.228,6.298)
C2': (82.734,111.564,7.885)
O2': (82.962,112.766,8.589)
N1: (81.299,109.519,8.418)
N3: (82.234,107.507,9.304)
N4: (81.295,105.492,8.776)
C6: (80.311,108.797,7.799)
C5: (80.259,107.461,7.902)
O3': (83.385,112.857,5.928)
Image (generated by PyMOL):