Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ8:0272:0273
Extra
PDB:
ATOM 1 O3' U A 271 64.170 102.960 -7.961 1.00122.29 O
ATOM 2 P C A 272 62.705 102.311 -7.782 1.00122.11 P
ATOM 3 OP1 C A 272 62.911 100.949 -7.220 1.00122.00 O
ATOM 4 OP2 C A 272 61.925 102.475 -9.036 1.00122.07 O
ATOM 5 O5' C A 272 62.018 103.210 -6.660 1.00120.54 O
ATOM 6 C5' C A 272 62.811 103.858 -5.651 1.00118.56 C
ATOM 7 C4' C A 272 62.399 105.303 -5.515 1.00117.31 C
ATOM 8 O4' C A 272 62.594 105.981 -6.791 1.00117.30 O
ATOM 9 C3' C A 272 60.943 105.538 -5.129 1.00116.63 C
ATOM 10 O3' C A 272 60.870 106.688 -4.291 1.00115.13 O
ATOM 11 C2' C A 272 60.275 105.792 -6.478 1.00116.89 C
ATOM 12 O2' C A 272 59.085 106.554 -6.392 1.00117.10 O
ATOM 13 C1' C A 272 61.373 106.555 -7.220 1.00116.89 C
ATOM 14 N1 C A 272 61.302 106.459 -8.695 1.00116.77 N
ATOM 15 C2 C A 272 61.343 107.641 -9.461 1.00116.69 C
ATOM 16 O2 C A 272 61.444 108.738 -8.885 1.00116.59 O
ATOM 17 N3 C A 272 61.271 107.555 -10.810 1.00116.71 N
ATOM 18 C4 C A 272 61.161 106.361 -11.399 1.00116.87 C
ATOM 19 N4 C A 272 61.084 106.326 -12.734 1.00116.55 N
ATOM 20 C5 C A 272 61.122 105.149 -10.649 1.00116.63 C
ATOM 21 C6 C A 272 61.196 105.243 -9.315 1.00116.42 C
ATOM 22 P A A 273 60.929 106.507 -2.694 1.00113.95 P
ATOM 23 OP1 A A 273 59.736 105.711 -2.290 1.00113.39 O
ATOM 24 OP2 A A 273 61.161 107.843 -2.079 1.00113.67 O
ATOM 25 O5' A A 273 62.239 105.625 -2.470 1.00111.28 O
TER
ATOM 1 O3' C B 272 60.870 106.688 -4.291 1.00115.13 O
ATOM 2 P A B 273 60.929 106.507 -2.694 1.00113.95 P
ATOM 3 OP1 A B 273 59.736 105.711 -2.290 1.00113.39 O
ATOM 4 OP2 A B 273 61.161 107.843 -2.079 1.00113.67 O
ATOM 5 O5' A B 273 62.239 105.625 -2.470 1.00111.28 O
ATOM 6 C5' A B 273 62.170 104.339 -1.821 1.00107.19 C
ATOM 7 C4' A B 273 63.519 103.967 -1.248 1.00104.06 C
ATOM 8 O4' A B 273 64.448 103.638 -2.315 1.00103.50 O
ATOM 9 C3' A B 273 64.228 105.065 -0.475 1.00102.06 C
ATOM 10 O3' A B 273 63.711 105.199 0.843 1.00 99.59 O
ATOM 11 C2' A B 273 65.676 104.596 -0.514 1.00101.78 C
ATOM 12 O2' A B 273 65.949 103.578 0.430 1.00101.29 O
ATOM 13 C1' A B 273 65.764 104.017 -1.932 1.00102.07 C
ATOM 14 N9 A B 273 66.285 104.966 -2.921 1.00101.50 N
ATOM 15 C8 A B 273 65.615 105.569 -3.961 1.00100.77 C
ATOM 16 N7 A B 273 66.358 106.392 -4.663 1.00100.54 N
ATOM 17 C5 A B 273 67.603 106.326 -4.049 1.00100.29 C
ATOM 18 C6 A B 273 68.826 106.975 -4.311 1.00 99.81 C
ATOM 19 N6 A B 273 69.003 107.860 -5.295 1.00 99.61 N
ATOM 20 N1 A B 273 69.875 106.682 -3.511 1.00 99.73 N
ATOM 21 C2 A B 273 69.698 105.803 -2.517 1.00 99.64 C
ATOM 22 N3 A B 273 68.601 105.135 -2.167 1.00100.21 N
ATOM 23 C4 A B 273 67.575 105.445 -2.981 1.00100.77 C
ATOM 24 P U B 274 63.347 106.662 1.412 1.00 98.32 P
ATOM 25 OP1 U B 274 62.642 106.482 2.709 1.00 97.99 O
ATOM 26 OP2 U B 274 62.696 107.440 0.323 1.00 97.89 O
ATOM 27 O5' U B 274 64.766 107.323 1.700 1.00 95.32 O
TER
ATOM 2 P C A 272 62.705 102.311 -7.782 1.00122.11 P
ATOM 3 OP1 C A 272 62.911 100.949 -7.220 1.00122.00 O
ATOM 4 OP2 C A 272 61.925 102.475 -9.036 1.00122.07 O
ATOM 5 O5' C A 272 62.018 103.210 -6.660 1.00120.54 O
ATOM 6 C5' C A 272 62.811 103.858 -5.651 1.00118.56 C
ATOM 7 C4' C A 272 62.399 105.303 -5.515 1.00117.31 C
ATOM 8 O4' C A 272 62.594 105.981 -6.791 1.00117.30 O
ATOM 9 C3' C A 272 60.943 105.538 -5.129 1.00116.63 C
ATOM 10 O3' C A 272 60.870 106.688 -4.291 1.00115.13 O
ATOM 11 C2' C A 272 60.275 105.792 -6.478 1.00116.89 C
ATOM 12 O2' C A 272 59.085 106.554 -6.392 1.00117.10 O
ATOM 13 C1' C A 272 61.373 106.555 -7.220 1.00116.89 C
ATOM 14 N1 C A 272 61.302 106.459 -8.695 1.00116.77 N
ATOM 15 C2 C A 272 61.343 107.641 -9.461 1.00116.69 C
ATOM 16 O2 C A 272 61.444 108.738 -8.885 1.00116.59 O
ATOM 17 N3 C A 272 61.271 107.555 -10.810 1.00116.71 N
ATOM 18 C4 C A 272 61.161 106.361 -11.399 1.00116.87 C
ATOM 19 N4 C A 272 61.084 106.326 -12.734 1.00116.55 N
ATOM 20 C5 C A 272 61.122 105.149 -10.649 1.00116.63 C
ATOM 21 C6 C A 272 61.196 105.243 -9.315 1.00116.42 C
ATOM 22 P A A 273 60.929 106.507 -2.694 1.00113.95 P
ATOM 23 OP1 A A 273 59.736 105.711 -2.290 1.00113.39 O
ATOM 24 OP2 A A 273 61.161 107.843 -2.079 1.00113.67 O
ATOM 25 O5' A A 273 62.239 105.625 -2.470 1.00111.28 O
TER
ATOM 1 O3' C B 272 60.870 106.688 -4.291 1.00115.13 O
ATOM 2 P A B 273 60.929 106.507 -2.694 1.00113.95 P
ATOM 3 OP1 A B 273 59.736 105.711 -2.290 1.00113.39 O
ATOM 4 OP2 A B 273 61.161 107.843 -2.079 1.00113.67 O
ATOM 5 O5' A B 273 62.239 105.625 -2.470 1.00111.28 O
ATOM 6 C5' A B 273 62.170 104.339 -1.821 1.00107.19 C
ATOM 7 C4' A B 273 63.519 103.967 -1.248 1.00104.06 C
ATOM 8 O4' A B 273 64.448 103.638 -2.315 1.00103.50 O
ATOM 9 C3' A B 273 64.228 105.065 -0.475 1.00102.06 C
ATOM 10 O3' A B 273 63.711 105.199 0.843 1.00 99.59 O
ATOM 11 C2' A B 273 65.676 104.596 -0.514 1.00101.78 C
ATOM 12 O2' A B 273 65.949 103.578 0.430 1.00101.29 O
ATOM 13 C1' A B 273 65.764 104.017 -1.932 1.00102.07 C
ATOM 14 N9 A B 273 66.285 104.966 -2.921 1.00101.50 N
ATOM 15 C8 A B 273 65.615 105.569 -3.961 1.00100.77 C
ATOM 16 N7 A B 273 66.358 106.392 -4.663 1.00100.54 N
ATOM 17 C5 A B 273 67.603 106.326 -4.049 1.00100.29 C
ATOM 18 C6 A B 273 68.826 106.975 -4.311 1.00 99.81 C
ATOM 19 N6 A B 273 69.003 107.860 -5.295 1.00 99.61 N
ATOM 20 N1 A B 273 69.875 106.682 -3.511 1.00 99.73 N
ATOM 21 C2 A B 273 69.698 105.803 -2.517 1.00 99.64 C
ATOM 22 N3 A B 273 68.601 105.135 -2.167 1.00100.21 N
ATOM 23 C4 A B 273 67.575 105.445 -2.981 1.00100.77 C
ATOM 24 P U B 274 63.347 106.662 1.412 1.00 98.32 P
ATOM 25 OP1 U B 274 62.642 106.482 2.709 1.00 97.99 O
ATOM 26 OP2 U B 274 62.696 107.440 0.323 1.00 97.89 O
ATOM 27 O5' U B 274 64.766 107.323 1.700 1.00 95.32 O
TER
Atoms:
C2: (61.343,107.641,-9.461)
OP1: (62.911,100.949,-7.220)
OP2: (61.925,102.475,-9.036)
C4: (61.161,106.361,-11.399)
O5': (62.018,103.210,-6.660)
C3': (60.943,105.538,-5.129)
C1': (61.373,106.555,-7.220)
O4': (62.594,105.981,-6.791)
C5': (62.811,103.858,-5.651)
P: (62.705,102.311,-7.782)
O2: (61.444,108.738,-8.885)
C4': (62.399,105.303,-5.515)
C2': (60.275,105.792,-6.478)
O2': (59.085,106.554,-6.392)
N1: (61.302,106.459,-8.695)
N3: (61.271,107.555,-10.810)
N4: (61.084,106.326,-12.734)
C6: (61.196,105.243,-9.315)
C5: (61.122,105.149,-10.649)
O3': (60.870,106.688,-4.291)
OP1: (62.911,100.949,-7.220)
OP2: (61.925,102.475,-9.036)
C4: (61.161,106.361,-11.399)
O5': (62.018,103.210,-6.660)
C3': (60.943,105.538,-5.129)
C1': (61.373,106.555,-7.220)
O4': (62.594,105.981,-6.791)
C5': (62.811,103.858,-5.651)
P: (62.705,102.311,-7.782)
O2: (61.444,108.738,-8.885)
C4': (62.399,105.303,-5.515)
C2': (60.275,105.792,-6.478)
O2': (59.085,106.554,-6.392)
N1: (61.302,106.459,-8.695)
N3: (61.271,107.555,-10.810)
N4: (61.084,106.326,-12.734)
C6: (61.196,105.243,-9.315)
C5: (61.122,105.149,-10.649)
O3': (60.870,106.688,-4.291)
OP1: (59.736,105.711,-2.290)
OP2: (61.161,107.843,-2.079)
C3': (64.228,105.065,-0.475)
C1': (65.764,104.017,-1.932)
C5': (62.170,104.339,-1.821)
O4': (64.448,103.638,-2.315)
C8: (65.615,105.569,-3.961)
O2': (65.949,103.578,0.430)
C6: (68.826,106.975,-4.311)
C5: (67.603,106.326,-4.049)
C4: (67.575,105.445,-2.981)
P: (60.929,106.507,-2.694)
C4': (63.519,103.967,-1.248)
C2': (65.676,104.596,-0.514)
C2: (69.698,105.803,-2.517)
N1: (69.875,106.682,-3.511)
N3: (68.601,105.135,-2.167)
N6: (69.003,107.860,-5.295)
N7: (66.358,106.392,-4.663)
N9: (66.285,104.966,-2.921)
O5': (62.239,105.625,-2.470)
O3': (63.711,105.199,0.843)
OP2: (61.161,107.843,-2.079)
C3': (64.228,105.065,-0.475)
C1': (65.764,104.017,-1.932)
C5': (62.170,104.339,-1.821)
O4': (64.448,103.638,-2.315)
C8: (65.615,105.569,-3.961)
O2': (65.949,103.578,0.430)
C6: (68.826,106.975,-4.311)
C5: (67.603,106.326,-4.049)
C4: (67.575,105.445,-2.981)
P: (60.929,106.507,-2.694)
C4': (63.519,103.967,-1.248)
C2': (65.676,104.596,-0.514)
C2: (69.698,105.803,-2.517)
N1: (69.875,106.682,-3.511)
N3: (68.601,105.135,-2.167)
N6: (69.003,107.860,-5.295)
N7: (66.358,106.392,-4.663)
N9: (66.285,104.966,-2.921)
O5': (62.239,105.625,-2.470)
O3': (63.711,105.199,0.843)
Image (generated by PyMOL):