Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ9:0272:0273
Extra
PDB:
ATOM 1 O3' U A 271 64.479 103.212 -8.125 1.00124.98 O
ATOM 2 P C A 272 63.086 102.428 -7.910 1.00124.78 P
ATOM 3 OP1 C A 272 63.440 101.015 -7.604 1.00124.54 O
ATOM 4 OP2 C A 272 62.162 102.726 -9.035 1.00124.65 O
ATOM 5 O5' C A 272 62.471 103.082 -6.594 1.00123.72 O
ATOM 6 C5' C A 272 63.265 103.943 -5.762 1.00122.53 C
ATOM 7 C4' C A 272 62.647 105.319 -5.694 1.00121.62 C
ATOM 8 O4' C A 272 62.657 105.932 -7.018 1.00121.89 O
ATOM 9 C3' C A 272 61.201 105.363 -5.217 1.00121.12 C
ATOM 10 O3' C A 272 61.017 106.541 -4.441 1.00119.27 O
ATOM 11 C2' C A 272 60.420 105.432 -6.528 1.00121.70 C
ATOM 12 O2' C A 272 59.129 105.998 -6.397 1.00122.07 O
ATOM 13 C1' C A 272 61.341 106.311 -7.378 1.00121.79 C
ATOM 14 N1 C A 272 61.196 106.187 -8.849 1.00121.91 N
ATOM 15 C2 C A 272 61.666 107.235 -9.670 1.00121.95 C
ATOM 16 O2 C A 272 62.189 108.233 -9.145 1.00121.94 O
ATOM 17 N3 C A 272 61.534 107.131 -11.014 1.00122.00 N
ATOM 18 C4 C A 272 60.963 106.047 -11.549 1.00122.04 C
ATOM 19 N4 C A 272 60.850 105.991 -12.879 1.00121.61 N
ATOM 20 C5 C A 272 60.481 104.972 -10.744 1.00121.87 C
ATOM 21 C6 C A 272 60.616 105.082 -9.415 1.00121.73 C
ATOM 22 P A A 273 61.100 106.452 -2.837 1.00117.84 P
ATOM 23 OP1 A A 273 59.913 105.681 -2.374 1.00117.48 O
ATOM 24 OP2 A A 273 61.340 107.821 -2.304 1.00117.92 O
ATOM 25 O5' A A 273 62.412 105.583 -2.576 1.00115.04 O
TER
ATOM 1 O3' C B 272 61.017 106.541 -4.441 1.00119.27 O
ATOM 2 P A B 273 61.100 106.452 -2.837 1.00117.84 P
ATOM 3 OP1 A B 273 59.913 105.681 -2.374 1.00117.48 O
ATOM 4 OP2 A B 273 61.340 107.821 -2.304 1.00117.92 O
ATOM 5 O5' A B 273 62.412 105.583 -2.576 1.00115.04 O
ATOM 6 C5' A B 273 62.354 104.361 -1.810 1.00110.37 C
ATOM 7 C4' A B 273 63.710 104.044 -1.221 1.00106.67 C
ATOM 8 O4' A B 273 64.643 103.688 -2.278 1.00105.86 O
ATOM 9 C3' A B 273 64.396 105.191 -0.499 1.00104.33 C
ATOM 10 O3' A B 273 63.889 105.367 0.819 1.00101.30 O
ATOM 11 C2' A B 273 65.856 104.760 -0.533 1.00104.14 C
ATOM 12 O2' A B 273 66.169 103.792 0.451 1.00103.58 O
ATOM 13 C1' A B 273 65.948 104.126 -1.927 1.00104.27 C
ATOM 14 N9 A B 273 66.422 105.052 -2.961 1.00103.42 N
ATOM 15 C8 A B 273 65.710 105.612 -3.997 1.00102.62 C
ATOM 16 N7 A B 273 66.417 106.423 -4.747 1.00102.44 N
ATOM 17 C5 A B 273 67.681 106.397 -4.170 1.00102.38 C
ATOM 18 C6 A B 273 68.886 107.056 -4.489 1.00102.05 C
ATOM 19 N6 A B 273 69.020 107.908 -5.506 1.00102.14 N
ATOM 20 N1 A B 273 69.962 106.807 -3.712 1.00102.11 N
ATOM 21 C2 A B 273 69.829 105.958 -2.686 1.00101.91 C
ATOM 22 N3 A B 273 68.755 105.283 -2.283 1.00102.13 N
ATOM 23 C4 A B 273 67.700 105.550 -3.075 1.00102.70 C
ATOM 24 P U B 274 63.580 106.852 1.363 1.00 99.79 P
ATOM 25 OP1 U B 274 62.892 106.735 2.677 1.00 99.29 O
ATOM 26 OP2 U B 274 62.936 107.621 0.262 1.00 99.19 O
ATOM 27 O5' U B 274 65.022 107.480 1.611 1.00 97.21 O
TER
ATOM 2 P C A 272 63.086 102.428 -7.910 1.00124.78 P
ATOM 3 OP1 C A 272 63.440 101.015 -7.604 1.00124.54 O
ATOM 4 OP2 C A 272 62.162 102.726 -9.035 1.00124.65 O
ATOM 5 O5' C A 272 62.471 103.082 -6.594 1.00123.72 O
ATOM 6 C5' C A 272 63.265 103.943 -5.762 1.00122.53 C
ATOM 7 C4' C A 272 62.647 105.319 -5.694 1.00121.62 C
ATOM 8 O4' C A 272 62.657 105.932 -7.018 1.00121.89 O
ATOM 9 C3' C A 272 61.201 105.363 -5.217 1.00121.12 C
ATOM 10 O3' C A 272 61.017 106.541 -4.441 1.00119.27 O
ATOM 11 C2' C A 272 60.420 105.432 -6.528 1.00121.70 C
ATOM 12 O2' C A 272 59.129 105.998 -6.397 1.00122.07 O
ATOM 13 C1' C A 272 61.341 106.311 -7.378 1.00121.79 C
ATOM 14 N1 C A 272 61.196 106.187 -8.849 1.00121.91 N
ATOM 15 C2 C A 272 61.666 107.235 -9.670 1.00121.95 C
ATOM 16 O2 C A 272 62.189 108.233 -9.145 1.00121.94 O
ATOM 17 N3 C A 272 61.534 107.131 -11.014 1.00122.00 N
ATOM 18 C4 C A 272 60.963 106.047 -11.549 1.00122.04 C
ATOM 19 N4 C A 272 60.850 105.991 -12.879 1.00121.61 N
ATOM 20 C5 C A 272 60.481 104.972 -10.744 1.00121.87 C
ATOM 21 C6 C A 272 60.616 105.082 -9.415 1.00121.73 C
ATOM 22 P A A 273 61.100 106.452 -2.837 1.00117.84 P
ATOM 23 OP1 A A 273 59.913 105.681 -2.374 1.00117.48 O
ATOM 24 OP2 A A 273 61.340 107.821 -2.304 1.00117.92 O
ATOM 25 O5' A A 273 62.412 105.583 -2.576 1.00115.04 O
TER
ATOM 1 O3' C B 272 61.017 106.541 -4.441 1.00119.27 O
ATOM 2 P A B 273 61.100 106.452 -2.837 1.00117.84 P
ATOM 3 OP1 A B 273 59.913 105.681 -2.374 1.00117.48 O
ATOM 4 OP2 A B 273 61.340 107.821 -2.304 1.00117.92 O
ATOM 5 O5' A B 273 62.412 105.583 -2.576 1.00115.04 O
ATOM 6 C5' A B 273 62.354 104.361 -1.810 1.00110.37 C
ATOM 7 C4' A B 273 63.710 104.044 -1.221 1.00106.67 C
ATOM 8 O4' A B 273 64.643 103.688 -2.278 1.00105.86 O
ATOM 9 C3' A B 273 64.396 105.191 -0.499 1.00104.33 C
ATOM 10 O3' A B 273 63.889 105.367 0.819 1.00101.30 O
ATOM 11 C2' A B 273 65.856 104.760 -0.533 1.00104.14 C
ATOM 12 O2' A B 273 66.169 103.792 0.451 1.00103.58 O
ATOM 13 C1' A B 273 65.948 104.126 -1.927 1.00104.27 C
ATOM 14 N9 A B 273 66.422 105.052 -2.961 1.00103.42 N
ATOM 15 C8 A B 273 65.710 105.612 -3.997 1.00102.62 C
ATOM 16 N7 A B 273 66.417 106.423 -4.747 1.00102.44 N
ATOM 17 C5 A B 273 67.681 106.397 -4.170 1.00102.38 C
ATOM 18 C6 A B 273 68.886 107.056 -4.489 1.00102.05 C
ATOM 19 N6 A B 273 69.020 107.908 -5.506 1.00102.14 N
ATOM 20 N1 A B 273 69.962 106.807 -3.712 1.00102.11 N
ATOM 21 C2 A B 273 69.829 105.958 -2.686 1.00101.91 C
ATOM 22 N3 A B 273 68.755 105.283 -2.283 1.00102.13 N
ATOM 23 C4 A B 273 67.700 105.550 -3.075 1.00102.70 C
ATOM 24 P U B 274 63.580 106.852 1.363 1.00 99.79 P
ATOM 25 OP1 U B 274 62.892 106.735 2.677 1.00 99.29 O
ATOM 26 OP2 U B 274 62.936 107.621 0.262 1.00 99.19 O
ATOM 27 O5' U B 274 65.022 107.480 1.611 1.00 97.21 O
TER
Atoms:
C2: (61.666,107.235,-9.670)
OP1: (63.440,101.015,-7.604)
OP2: (62.162,102.726,-9.035)
C4: (60.963,106.047,-11.549)
O5': (62.471,103.082,-6.594)
C3': (61.201,105.363,-5.217)
C1': (61.341,106.311,-7.378)
O4': (62.657,105.932,-7.018)
C5': (63.265,103.943,-5.762)
P: (63.086,102.428,-7.910)
O2: (62.189,108.233,-9.145)
C4': (62.647,105.319,-5.694)
C2': (60.420,105.432,-6.528)
O2': (59.129,105.998,-6.397)
N1: (61.196,106.187,-8.849)
N3: (61.534,107.131,-11.014)
N4: (60.850,105.991,-12.879)
C6: (60.616,105.082,-9.415)
C5: (60.481,104.972,-10.744)
O3': (61.017,106.541,-4.441)
OP1: (63.440,101.015,-7.604)
OP2: (62.162,102.726,-9.035)
C4: (60.963,106.047,-11.549)
O5': (62.471,103.082,-6.594)
C3': (61.201,105.363,-5.217)
C1': (61.341,106.311,-7.378)
O4': (62.657,105.932,-7.018)
C5': (63.265,103.943,-5.762)
P: (63.086,102.428,-7.910)
O2: (62.189,108.233,-9.145)
C4': (62.647,105.319,-5.694)
C2': (60.420,105.432,-6.528)
O2': (59.129,105.998,-6.397)
N1: (61.196,106.187,-8.849)
N3: (61.534,107.131,-11.014)
N4: (60.850,105.991,-12.879)
C6: (60.616,105.082,-9.415)
C5: (60.481,104.972,-10.744)
O3': (61.017,106.541,-4.441)
OP1: (59.913,105.681,-2.374)
OP2: (61.340,107.821,-2.304)
C3': (64.396,105.191,-0.499)
C1': (65.948,104.126,-1.927)
C5': (62.354,104.361,-1.810)
O4': (64.643,103.688,-2.278)
C8: (65.710,105.612,-3.997)
O2': (66.169,103.792,0.451)
C6: (68.886,107.056,-4.489)
C5: (67.681,106.397,-4.170)
C4: (67.700,105.550,-3.075)
P: (61.100,106.452,-2.837)
C4': (63.710,104.044,-1.221)
C2': (65.856,104.760,-0.533)
C2: (69.829,105.958,-2.686)
N1: (69.962,106.807,-3.712)
N3: (68.755,105.283,-2.283)
N6: (69.020,107.908,-5.506)
N7: (66.417,106.423,-4.747)
N9: (66.422,105.052,-2.961)
O5': (62.412,105.583,-2.576)
O3': (63.889,105.367,0.819)
OP2: (61.340,107.821,-2.304)
C3': (64.396,105.191,-0.499)
C1': (65.948,104.126,-1.927)
C5': (62.354,104.361,-1.810)
O4': (64.643,103.688,-2.278)
C8: (65.710,105.612,-3.997)
O2': (66.169,103.792,0.451)
C6: (68.886,107.056,-4.489)
C5: (67.681,106.397,-4.170)
C4: (67.700,105.550,-3.075)
P: (61.100,106.452,-2.837)
C4': (63.710,104.044,-1.221)
C2': (65.856,104.760,-0.533)
C2: (69.829,105.958,-2.686)
N1: (69.962,106.807,-3.712)
N3: (68.755,105.283,-2.283)
N6: (69.020,107.908,-5.506)
N7: (66.417,106.423,-4.747)
N9: (66.422,105.052,-2.961)
O5': (62.412,105.583,-2.576)
O3': (63.889,105.367,0.819)
Image (generated by PyMOL):