ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3R8T:A48:A47

Extra

PDB:
ATOM 1 O3' G A 47 7.443 179.311 168.621 1.00 25.18 O
ATOM 2 P A A 48 8.224 180.520 167.910 1.00 32.38 P
ATOM 3 OP1 A A 48 8.649 181.459 168.989 1.00 32.38 O
ATOM 4 OP2 A A 48 7.336 181.028 166.823 1.00 32.38 O
ATOM 5 O5' A A 48 9.504 179.801 167.284 1.00 32.38 O
ATOM 6 C5' A A 48 9.360 178.761 166.325 1.00 32.38 C
ATOM 7 C4' A A 48 10.589 178.614 165.473 1.00 32.38 C
ATOM 8 O4' A A 48 10.373 177.527 164.530 1.00 32.38 O
ATOM 9 C3' A A 48 10.927 179.840 164.632 1.00 32.38 C
ATOM 10 O3' A A 48 12.343 179.910 164.416 1.00 32.38 O
ATOM 11 C2' A A 48 10.214 179.536 163.322 1.00 32.38 C
ATOM 12 O2' A A 48 10.706 180.238 162.196 1.00 32.38 O
ATOM 13 C1' A A 48 10.435 178.026 163.209 1.00 32.38 C
ATOM 14 N9 A A 48 9.427 177.345 162.398 1.00 32.30 N
ATOM 15 C8 A A 48 9.623 176.690 161.211 1.00 32.30 C
ATOM 16 N7 A A 48 8.515 176.233 160.683 1.00 32.30 N
ATOM 17 C5 A A 48 7.527 176.604 161.570 1.00 32.30 C
ATOM 18 C6 A A 48 6.145 176.403 161.561 1.00 32.30 C
ATOM 19 N6 A A 48 5.484 175.752 160.614 1.00 32.30 N
ATOM 20 N1 A A 48 5.457 176.912 162.592 1.00 32.30 N
ATOM 21 C2 A A 48 6.117 177.580 163.550 1.00 32.30 C
ATOM 22 N3 A A 48 7.416 177.840 163.669 1.00 32.30 N
ATOM 23 C4 A A 48 8.074 177.312 162.629 1.00 32.30 C
ATOM 24 P U A 49 13.183 181.179 164.936 1.00 41.04 P
ATOM 25 OP1 U A 49 12.475 182.393 164.468 1.00 41.04 O
ATOM 26 OP2 U A 49 14.582 180.965 164.519 1.00 41.04 O
ATOM 27 O5' U A 49 13.063 181.064 166.515 1.00 41.04 O
TER

ATOM 1 O3' C B 46 3.174 180.733 172.795 1.00 29.41 O
ATOM 2 P G B 47 4.257 181.358 171.785 1.00 25.18 P
ATOM 3 OP1 G B 47 5.552 181.434 172.503 1.00 25.18 O
ATOM 4 OP2 G B 47 3.657 182.603 171.242 1.00 25.18 O
ATOM 5 O5' G B 47 4.352 180.248 170.645 1.00 25.18 O
ATOM 6 C5' G B 47 5.088 179.043 170.847 1.00 25.18 C
ATOM 7 C4' G B 47 5.381 178.351 169.534 1.00 25.18 C
ATOM 8 O4' G B 47 4.137 177.925 168.916 1.00 25.18 O
ATOM 9 C3' G B 47 6.041 179.208 168.466 1.00 25.18 C
ATOM 10 O3' G B 47 7.443 179.311 168.621 1.00 25.18 O
ATOM 11 C2' G B 47 5.620 178.528 167.172 1.00 25.18 C
ATOM 12 O2' G B 47 6.408 177.377 166.928 1.00 25.18 O
ATOM 13 C1' G B 47 4.211 178.075 167.511 1.00 25.18 C
ATOM 14 N9 G B 47 3.203 179.057 167.089 1.00 24.79 N
ATOM 15 C8 G B 47 2.509 179.914 167.902 1.00 24.79 C
ATOM 16 N7 G B 47 1.661 180.652 167.254 1.00 24.79 N
ATOM 17 C5 G B 47 1.816 180.259 165.942 1.00 24.79 C
ATOM 18 C6 G B 47 1.157 180.727 164.788 1.00 24.79 C
ATOM 19 O6 G B 47 0.296 181.604 164.700 1.00 24.79 O
ATOM 20 N1 G B 47 1.593 180.058 163.656 1.00 24.79 N
ATOM 21 C2 G B 47 2.549 179.067 163.643 1.00 24.79 C
ATOM 22 N2 G B 47 2.829 178.553 162.434 1.00 24.79 N
ATOM 23 N3 G B 47 3.178 178.622 164.725 1.00 24.79 N
ATOM 24 C4 G B 47 2.759 179.269 165.823 1.00 24.79 C
ATOM 25 P A B 48 8.224 180.520 167.910 1.00 32.38 P
ATOM 26 OP1 A B 48 8.649 181.459 168.989 1.00 32.38 O
ATOM 27 OP2 A B 48 7.336 181.028 166.823 1.00 32.38 O
ATOM 28 O5' A B 48 9.504 179.801 167.284 1.00 32.38 O
TER

Atoms:
OP1: (8.649,181.459,168.989)
OP2: (7.336,181.028,166.823)
C3': (10.927,179.840,164.632)
C1': (10.435,178.026,163.209)
C5': (9.360,178.761,166.325)
O4': (10.373,177.527,164.530)
C8: (9.623,176.690,161.211)
O2': (10.706,180.238,162.196)
C6: (6.145,176.403,161.561)
C5: (7.527,176.604,161.570)
C4: (8.074,177.312,162.629)
P: (8.224,180.520,167.910)
C4': (10.589,178.614,165.473)
C2': (10.214,179.536,163.322)
C2: (6.117,177.580,163.550)
N1: (5.457,176.912,162.592)
N3: (7.416,177.840,163.669)
N6: (5.484,175.752,160.614)
N7: (8.515,176.233,160.683)
N9: (9.427,177.345,162.398)
O5': (9.504,179.801,167.284)
O3': (12.343,179.910,164.416)
OP1: (5.552,181.434,172.503)
OP2: (3.657,182.603,171.242)
C3': (6.041,179.208,168.466)
C1': (4.211,178.075,167.511)
C5': (5.088,179.043,170.847)
O6: (0.296,181.604,164.700)
O4': (4.137,177.925,168.916)
C8: (2.509,179.914,167.902)
C2: (2.549,179.067,163.643)
C6: (1.157,180.727,164.788)
C5: (1.816,180.259,165.942)
C4: (2.759,179.269,165.823)
P: (4.257,181.358,171.785)
C4': (5.381,178.351,169.534)
C2': (5.620,178.528,167.172)
O2': (6.408,177.377,166.928)
N1: (1.593,180.058,163.656)
N2: (2.829,178.553,162.434)
N3: (3.178,178.622,164.725)
N7: (1.661,180.652,167.254)
N9: (3.203,179.057,167.089)
O5': (4.352,180.248,170.645)
O3': (7.443,179.311,168.621)
Image (generated by PyMOL):
PyMOL image
show in jmol