Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQL:0258:0228
Extra
PDB:
ATOM 1 O3' G A 257 78.747 103.660 -0.362 1.00 58.45 O
ATOM 2 P U A 258 77.249 103.611 0.216 1.00 59.70 P
ATOM 3 OP1 U A 258 76.620 102.343 -0.237 1.00 62.09 O
ATOM 4 OP2 U A 258 76.574 104.901 -0.072 1.00 57.78 O
ATOM 5 O5' U A 258 77.482 103.484 1.784 1.00 61.77 O
ATOM 6 C5' U A 258 78.164 102.337 2.323 1.00 64.27 C
ATOM 7 C4' U A 258 78.392 102.505 3.806 1.00 66.51 C
ATOM 8 O4' U A 258 79.463 103.467 4.040 1.00 63.25 O
ATOM 9 C3' U A 258 77.184 103.001 4.600 1.00 68.74 C
ATOM 10 O3' U A 258 77.122 102.344 5.861 1.00 77.28 O
ATOM 11 C2' U A 258 77.509 104.478 4.802 1.00 65.22 C
ATOM 12 O2' U A 258 76.880 105.022 5.944 1.00 64.07 O
ATOM 13 C1' U A 258 79.024 104.414 4.985 1.00 61.62 C
ATOM 14 N1 U A 258 79.805 105.658 4.844 1.00 56.50 N
ATOM 15 C2 U A 258 81.144 105.619 5.212 1.00 53.71 C
ATOM 16 O2 U A 258 81.710 104.602 5.551 1.00 52.57 O
ATOM 17 N3 U A 258 81.798 106.824 5.169 1.00 53.91 N
ATOM 18 C4 U A 258 81.273 108.040 4.795 1.00 54.25 C
ATOM 19 O4 U A 258 81.983 109.048 4.858 1.00 54.82 O
ATOM 20 C5 U A 258 79.905 107.993 4.364 1.00 53.50 C
ATOM 21 C6 U A 258 79.235 106.835 4.402 1.00 54.57 C
ATOM 22 P C A 259 75.704 101.822 6.420 1.00 83.52 P
ATOM 23 OP1 C A 259 74.626 102.737 5.949 1.00 82.40 O
ATOM 24 OP2 C A 259 75.868 101.576 7.875 1.00 84.15 O
ATOM 25 O5' C A 259 75.492 100.415 5.707 1.00 86.73 O
TER
ATOM 1 O3' C B 227 76.604 112.265 4.449 1.00 52.74 O
ATOM 2 P C B 228 78.051 111.938 3.832 1.00 52.88 P
ATOM 3 OP1 C B 228 78.194 112.798 2.633 1.00 56.55 O
ATOM 4 OP2 C B 228 78.213 110.469 3.710 1.00 52.10 O
ATOM 5 O5' C B 228 79.066 112.450 4.950 1.00 52.39 O
ATOM 6 C5' C B 228 80.427 112.009 4.960 1.00 49.56 C
ATOM 7 C4' C B 228 81.051 112.261 6.308 1.00 49.89 C
ATOM 8 O4' C B 228 80.386 111.466 7.327 1.00 50.35 O
ATOM 9 C3' C B 228 82.504 111.834 6.384 1.00 49.91 C
ATOM 10 O3' C B 228 83.335 112.883 5.898 1.00 48.96 O
ATOM 11 C2' C B 228 82.708 111.583 7.874 1.00 49.83 C
ATOM 12 O2' C B 228 82.964 112.768 8.600 1.00 51.85 O
ATOM 13 C1' C B 228 81.341 111.023 8.288 1.00 48.43 C
ATOM 14 N1 C B 228 81.261 109.549 8.416 1.00 45.76 N
ATOM 15 C2 C B 228 82.224 108.869 9.193 1.00 46.66 C
ATOM 16 O2 C B 228 83.102 109.521 9.781 1.00 47.47 O
ATOM 17 N3 C B 228 82.163 107.519 9.287 1.00 45.27 N
ATOM 18 C4 C B 228 81.192 106.848 8.658 1.00 45.33 C
ATOM 19 N4 C B 228 81.182 105.520 8.762 1.00 41.95 N
ATOM 20 C5 C B 228 80.190 107.511 7.887 1.00 44.35 C
ATOM 21 C6 C B 228 80.265 108.846 7.791 1.00 46.47 C
ATOM 22 P A B 229 84.742 112.537 5.216 1.00 49.28 P
ATOM 23 OP1 A B 229 85.515 113.811 5.145 1.00 50.06 O
ATOM 24 OP2 A B 229 84.458 111.774 3.978 1.00 50.66 O
ATOM 25 O5' A B 229 85.461 111.553 6.240 1.00 48.89 O
TER
ATOM 2 P U A 258 77.249 103.611 0.216 1.00 59.70 P
ATOM 3 OP1 U A 258 76.620 102.343 -0.237 1.00 62.09 O
ATOM 4 OP2 U A 258 76.574 104.901 -0.072 1.00 57.78 O
ATOM 5 O5' U A 258 77.482 103.484 1.784 1.00 61.77 O
ATOM 6 C5' U A 258 78.164 102.337 2.323 1.00 64.27 C
ATOM 7 C4' U A 258 78.392 102.505 3.806 1.00 66.51 C
ATOM 8 O4' U A 258 79.463 103.467 4.040 1.00 63.25 O
ATOM 9 C3' U A 258 77.184 103.001 4.600 1.00 68.74 C
ATOM 10 O3' U A 258 77.122 102.344 5.861 1.00 77.28 O
ATOM 11 C2' U A 258 77.509 104.478 4.802 1.00 65.22 C
ATOM 12 O2' U A 258 76.880 105.022 5.944 1.00 64.07 O
ATOM 13 C1' U A 258 79.024 104.414 4.985 1.00 61.62 C
ATOM 14 N1 U A 258 79.805 105.658 4.844 1.00 56.50 N
ATOM 15 C2 U A 258 81.144 105.619 5.212 1.00 53.71 C
ATOM 16 O2 U A 258 81.710 104.602 5.551 1.00 52.57 O
ATOM 17 N3 U A 258 81.798 106.824 5.169 1.00 53.91 N
ATOM 18 C4 U A 258 81.273 108.040 4.795 1.00 54.25 C
ATOM 19 O4 U A 258 81.983 109.048 4.858 1.00 54.82 O
ATOM 20 C5 U A 258 79.905 107.993 4.364 1.00 53.50 C
ATOM 21 C6 U A 258 79.235 106.835 4.402 1.00 54.57 C
ATOM 22 P C A 259 75.704 101.822 6.420 1.00 83.52 P
ATOM 23 OP1 C A 259 74.626 102.737 5.949 1.00 82.40 O
ATOM 24 OP2 C A 259 75.868 101.576 7.875 1.00 84.15 O
ATOM 25 O5' C A 259 75.492 100.415 5.707 1.00 86.73 O
TER
ATOM 1 O3' C B 227 76.604 112.265 4.449 1.00 52.74 O
ATOM 2 P C B 228 78.051 111.938 3.832 1.00 52.88 P
ATOM 3 OP1 C B 228 78.194 112.798 2.633 1.00 56.55 O
ATOM 4 OP2 C B 228 78.213 110.469 3.710 1.00 52.10 O
ATOM 5 O5' C B 228 79.066 112.450 4.950 1.00 52.39 O
ATOM 6 C5' C B 228 80.427 112.009 4.960 1.00 49.56 C
ATOM 7 C4' C B 228 81.051 112.261 6.308 1.00 49.89 C
ATOM 8 O4' C B 228 80.386 111.466 7.327 1.00 50.35 O
ATOM 9 C3' C B 228 82.504 111.834 6.384 1.00 49.91 C
ATOM 10 O3' C B 228 83.335 112.883 5.898 1.00 48.96 O
ATOM 11 C2' C B 228 82.708 111.583 7.874 1.00 49.83 C
ATOM 12 O2' C B 228 82.964 112.768 8.600 1.00 51.85 O
ATOM 13 C1' C B 228 81.341 111.023 8.288 1.00 48.43 C
ATOM 14 N1 C B 228 81.261 109.549 8.416 1.00 45.76 N
ATOM 15 C2 C B 228 82.224 108.869 9.193 1.00 46.66 C
ATOM 16 O2 C B 228 83.102 109.521 9.781 1.00 47.47 O
ATOM 17 N3 C B 228 82.163 107.519 9.287 1.00 45.27 N
ATOM 18 C4 C B 228 81.192 106.848 8.658 1.00 45.33 C
ATOM 19 N4 C B 228 81.182 105.520 8.762 1.00 41.95 N
ATOM 20 C5 C B 228 80.190 107.511 7.887 1.00 44.35 C
ATOM 21 C6 C B 228 80.265 108.846 7.791 1.00 46.47 C
ATOM 22 P A B 229 84.742 112.537 5.216 1.00 49.28 P
ATOM 23 OP1 A B 229 85.515 113.811 5.145 1.00 50.06 O
ATOM 24 OP2 A B 229 84.458 111.774 3.978 1.00 50.66 O
ATOM 25 O5' A B 229 85.461 111.553 6.240 1.00 48.89 O
TER
Atoms:
C4: (81.273,108.040,4.795)
N3: (81.798,106.824,5.169)
OP1: (76.620,102.343,-0.237)
OP2: (76.574,104.901,-0.072)
C2: (81.144,105.619,5.212)
C1': (79.024,104.414,4.985)
C3': (77.184,103.001,4.600)
O5': (77.482,103.484,1.784)
O4': (79.463,103.467,4.040)
C5': (78.164,102.337,2.323)
P: (77.249,103.611,0.216)
C4': (78.392,102.505,3.806)
C2': (77.509,104.478,4.802)
O2': (76.880,105.022,5.944)
N1: (79.805,105.658,4.844)
O4: (81.983,109.048,4.858)
O2: (81.710,104.602,5.551)
C6: (79.235,106.835,4.402)
C5: (79.905,107.993,4.364)
O3': (77.122,102.344,5.861)
N3: (81.798,106.824,5.169)
OP1: (76.620,102.343,-0.237)
OP2: (76.574,104.901,-0.072)
C2: (81.144,105.619,5.212)
C1': (79.024,104.414,4.985)
C3': (77.184,103.001,4.600)
O5': (77.482,103.484,1.784)
O4': (79.463,103.467,4.040)
C5': (78.164,102.337,2.323)
P: (77.249,103.611,0.216)
C4': (78.392,102.505,3.806)
C2': (77.509,104.478,4.802)
O2': (76.880,105.022,5.944)
N1: (79.805,105.658,4.844)
O4: (81.983,109.048,4.858)
O2: (81.710,104.602,5.551)
C6: (79.235,106.835,4.402)
C5: (79.905,107.993,4.364)
O3': (77.122,102.344,5.861)
C2: (82.224,108.869,9.193)
OP1: (78.194,112.798,2.633)
OP2: (78.213,110.469,3.710)
C4: (81.192,106.848,8.658)
O5': (79.066,112.450,4.950)
C3': (82.504,111.834,6.384)
C1': (81.341,111.023,8.288)
O4': (80.386,111.466,7.327)
C5': (80.427,112.009,4.960)
P: (78.051,111.938,3.832)
O2: (83.102,109.521,9.781)
C4': (81.051,112.261,6.308)
C2': (82.708,111.583,7.874)
O2': (82.964,112.768,8.600)
N1: (81.261,109.549,8.416)
N3: (82.163,107.519,9.287)
N4: (81.182,105.520,8.762)
C6: (80.265,108.846,7.791)
C5: (80.190,107.511,7.887)
O3': (83.335,112.883,5.898)
OP1: (78.194,112.798,2.633)
OP2: (78.213,110.469,3.710)
C4: (81.192,106.848,8.658)
O5': (79.066,112.450,4.950)
C3': (82.504,111.834,6.384)
C1': (81.341,111.023,8.288)
O4': (80.386,111.466,7.327)
C5': (80.427,112.009,4.960)
P: (78.051,111.938,3.832)
O2: (83.102,109.521,9.781)
C4': (81.051,112.261,6.308)
C2': (82.708,111.583,7.874)
O2': (82.964,112.768,8.600)
N1: (81.261,109.549,8.416)
N3: (82.163,107.519,9.287)
N4: (81.182,105.520,8.762)
C6: (80.265,108.846,7.791)
C5: (80.190,107.511,7.887)
O3': (83.335,112.883,5.898)
Image (generated by PyMOL):