Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:21106:2962
Extra
PDB:
ATOM 1 O3' C A1105 -26.814 13.031 95.998 1.00 63.99 O
ATOM 2 P A A1106 -28.078 13.136 95.013 1.00 62.66 P
ATOM 3 OP1 A A1106 -27.637 13.864 93.799 1.00 62.45 O
ATOM 4 OP2 A A1106 -29.190 13.687 95.826 1.00 62.75 O
ATOM 5 O5' A A1106 -28.368 11.623 94.639 1.00 62.70 O
ATOM 6 C5' A A1106 -27.347 10.801 94.107 1.00 62.70 C
ATOM 7 C4' A A1106 -27.676 9.353 94.304 1.00 62.83 C
ATOM 8 O4' A A1106 -27.769 9.070 95.717 1.00 63.10 O
ATOM 9 C3' A A1106 -29.006 8.911 93.723 1.00 62.75 C
ATOM 10 O3' A A1106 -28.874 8.518 92.379 1.00 62.58 O
ATOM 11 C2' A A1106 -29.420 7.773 94.634 1.00 63.00 C
ATOM 12 O2' A A1106 -28.761 6.573 94.253 1.00 63.05 O
ATOM 13 C1' A A1106 -28.844 8.211 95.969 1.00 63.20 C
ATOM 14 N9 A A1106 -29.812 8.912 96.832 1.00 63.28 N
ATOM 15 C8 A A1106 -30.044 10.253 97.023 1.00 63.20 C
ATOM 16 N7 A A1106 -30.933 10.531 97.957 1.00 63.35 N
ATOM 17 C5 A A1106 -31.270 9.283 98.426 1.00 63.56 C
ATOM 18 C6 A A1106 -32.141 8.877 99.421 1.00 63.82 C
ATOM 19 N6 A A1106 -32.852 9.738 100.131 1.00 63.90 N
ATOM 20 N1 A A1106 -32.266 7.555 99.652 1.00 64.01 N
ATOM 21 C2 A A1106 -31.527 6.707 98.927 1.00 63.93 C
ATOM 22 N3 A A1106 -30.656 6.961 97.957 1.00 63.70 N
ATOM 23 C4 A A1106 -30.589 8.284 97.758 1.00 63.52 C
ATOM 24 P A A1107 -30.039 8.786 91.328 1.00 56.25 P
ATOM 25 OP1 A A1107 -29.485 8.504 89.981 1.00 56.10 O
ATOM 26 OP2 A A1107 -30.606 10.145 91.609 1.00 56.20 O
ATOM 27 O5' A A1107 -31.091 7.692 91.687 1.00 56.39 O
TER
ATOM 1 O3' A B 961 -36.024 -3.505 100.618 1.00 61.92 O
ATOM 2 P G B 962 -34.550 -3.482 101.272 1.00 64.74 P
ATOM 3 OP1 G B 962 -33.766 -4.558 100.619 1.00 65.12 O
ATOM 4 OP2 G B 962 -34.712 -3.516 102.731 1.00 65.43 O
ATOM 5 O5' G B 962 -33.999 -2.056 100.836 1.00 63.66 O
ATOM 6 C5' G B 962 -33.706 -1.781 99.476 1.00 62.92 C
ATOM 7 C4' G B 962 -33.705 -0.302 99.174 1.00 61.94 C
ATOM 8 O4' G B 962 -34.957 0.326 99.593 1.00 61.78 O
ATOM 9 C3' G B 962 -32.661 0.542 99.862 1.00 61.74 C
ATOM 10 O3' G B 962 -31.373 0.356 99.332 1.00 61.65 O
ATOM 11 C2' G B 962 -33.221 1.926 99.590 1.00 60.87 C
ATOM 12 O2' G B 962 -33.105 2.233 98.210 1.00 60.16 O
ATOM 13 C1' G B 962 -34.704 1.698 99.881 1.00 61.13 C
ATOM 14 N9 G B 962 -35.010 1.979 101.299 1.00 61.59 N
ATOM 15 C8 G B 962 -35.464 1.154 102.316 1.00 62.51 C
ATOM 16 N7 G B 962 -35.564 1.769 103.474 1.00 62.72 N
ATOM 17 C5 G B 962 -35.130 3.065 103.195 1.00 61.89 C
ATOM 18 C6 G B 962 -35.014 4.205 104.033 1.00 61.70 C
ATOM 19 O6 G B 962 -35.268 4.295 105.235 1.00 62.26 O
ATOM 20 N1 G B 962 -34.542 5.319 103.366 1.00 60.81 N
ATOM 21 C2 G B 962 -34.228 5.352 102.044 1.00 60.18 C
ATOM 22 N2 G B 962 -33.791 6.538 101.588 1.00 59.41 N
ATOM 23 N3 G B 962 -34.348 4.309 101.239 1.00 60.34 N
ATOM 24 C4 G B 962 -34.788 3.207 101.870 1.00 61.19 C
ATOM 25 P U B 963 -30.139 -0.027 100.283 1.00 59.48 P
ATOM 26 OP1 U B 963 -29.211 -0.846 99.470 1.00 59.66 O
ATOM 27 OP2 U B 963 -30.697 -0.602 101.506 1.00 60.32 O
ATOM 28 O5' U B 963 -29.487 1.383 100.610 1.00 58.85 O
TER
ATOM 2 P A A1106 -28.078 13.136 95.013 1.00 62.66 P
ATOM 3 OP1 A A1106 -27.637 13.864 93.799 1.00 62.45 O
ATOM 4 OP2 A A1106 -29.190 13.687 95.826 1.00 62.75 O
ATOM 5 O5' A A1106 -28.368 11.623 94.639 1.00 62.70 O
ATOM 6 C5' A A1106 -27.347 10.801 94.107 1.00 62.70 C
ATOM 7 C4' A A1106 -27.676 9.353 94.304 1.00 62.83 C
ATOM 8 O4' A A1106 -27.769 9.070 95.717 1.00 63.10 O
ATOM 9 C3' A A1106 -29.006 8.911 93.723 1.00 62.75 C
ATOM 10 O3' A A1106 -28.874 8.518 92.379 1.00 62.58 O
ATOM 11 C2' A A1106 -29.420 7.773 94.634 1.00 63.00 C
ATOM 12 O2' A A1106 -28.761 6.573 94.253 1.00 63.05 O
ATOM 13 C1' A A1106 -28.844 8.211 95.969 1.00 63.20 C
ATOM 14 N9 A A1106 -29.812 8.912 96.832 1.00 63.28 N
ATOM 15 C8 A A1106 -30.044 10.253 97.023 1.00 63.20 C
ATOM 16 N7 A A1106 -30.933 10.531 97.957 1.00 63.35 N
ATOM 17 C5 A A1106 -31.270 9.283 98.426 1.00 63.56 C
ATOM 18 C6 A A1106 -32.141 8.877 99.421 1.00 63.82 C
ATOM 19 N6 A A1106 -32.852 9.738 100.131 1.00 63.90 N
ATOM 20 N1 A A1106 -32.266 7.555 99.652 1.00 64.01 N
ATOM 21 C2 A A1106 -31.527 6.707 98.927 1.00 63.93 C
ATOM 22 N3 A A1106 -30.656 6.961 97.957 1.00 63.70 N
ATOM 23 C4 A A1106 -30.589 8.284 97.758 1.00 63.52 C
ATOM 24 P A A1107 -30.039 8.786 91.328 1.00 56.25 P
ATOM 25 OP1 A A1107 -29.485 8.504 89.981 1.00 56.10 O
ATOM 26 OP2 A A1107 -30.606 10.145 91.609 1.00 56.20 O
ATOM 27 O5' A A1107 -31.091 7.692 91.687 1.00 56.39 O
TER
ATOM 1 O3' A B 961 -36.024 -3.505 100.618 1.00 61.92 O
ATOM 2 P G B 962 -34.550 -3.482 101.272 1.00 64.74 P
ATOM 3 OP1 G B 962 -33.766 -4.558 100.619 1.00 65.12 O
ATOM 4 OP2 G B 962 -34.712 -3.516 102.731 1.00 65.43 O
ATOM 5 O5' G B 962 -33.999 -2.056 100.836 1.00 63.66 O
ATOM 6 C5' G B 962 -33.706 -1.781 99.476 1.00 62.92 C
ATOM 7 C4' G B 962 -33.705 -0.302 99.174 1.00 61.94 C
ATOM 8 O4' G B 962 -34.957 0.326 99.593 1.00 61.78 O
ATOM 9 C3' G B 962 -32.661 0.542 99.862 1.00 61.74 C
ATOM 10 O3' G B 962 -31.373 0.356 99.332 1.00 61.65 O
ATOM 11 C2' G B 962 -33.221 1.926 99.590 1.00 60.87 C
ATOM 12 O2' G B 962 -33.105 2.233 98.210 1.00 60.16 O
ATOM 13 C1' G B 962 -34.704 1.698 99.881 1.00 61.13 C
ATOM 14 N9 G B 962 -35.010 1.979 101.299 1.00 61.59 N
ATOM 15 C8 G B 962 -35.464 1.154 102.316 1.00 62.51 C
ATOM 16 N7 G B 962 -35.564 1.769 103.474 1.00 62.72 N
ATOM 17 C5 G B 962 -35.130 3.065 103.195 1.00 61.89 C
ATOM 18 C6 G B 962 -35.014 4.205 104.033 1.00 61.70 C
ATOM 19 O6 G B 962 -35.268 4.295 105.235 1.00 62.26 O
ATOM 20 N1 G B 962 -34.542 5.319 103.366 1.00 60.81 N
ATOM 21 C2 G B 962 -34.228 5.352 102.044 1.00 60.18 C
ATOM 22 N2 G B 962 -33.791 6.538 101.588 1.00 59.41 N
ATOM 23 N3 G B 962 -34.348 4.309 101.239 1.00 60.34 N
ATOM 24 C4 G B 962 -34.788 3.207 101.870 1.00 61.19 C
ATOM 25 P U B 963 -30.139 -0.027 100.283 1.00 59.48 P
ATOM 26 OP1 U B 963 -29.211 -0.846 99.470 1.00 59.66 O
ATOM 27 OP2 U B 963 -30.697 -0.602 101.506 1.00 60.32 O
ATOM 28 O5' U B 963 -29.487 1.383 100.610 1.00 58.85 O
TER
Atoms:
OP1: (-27.637,13.864,93.799)
OP2: (-29.190,13.687,95.826)
C3': (-29.006,8.911,93.723)
C1': (-28.844,8.211,95.969)
C5': (-27.347,10.801,94.107)
O4': (-27.769,9.070,95.717)
C8: (-30.044,10.253,97.023)
O2': (-28.761,6.573,94.253)
C6: (-32.141,8.877,99.421)
C5: (-31.270,9.283,98.426)
C4: (-30.589,8.284,97.758)
P: (-28.078,13.136,95.013)
C4': (-27.676,9.353,94.304)
C2': (-29.420,7.773,94.634)
C2: (-31.527,6.707,98.927)
N1: (-32.266,7.555,99.652)
N3: (-30.656,6.961,97.957)
N6: (-32.852,9.738,100.131)
N7: (-30.933,10.531,97.957)
N9: (-29.812,8.912,96.832)
O5': (-28.368,11.623,94.639)
O3': (-28.874,8.518,92.379)
OP2: (-29.190,13.687,95.826)
C3': (-29.006,8.911,93.723)
C1': (-28.844,8.211,95.969)
C5': (-27.347,10.801,94.107)
O4': (-27.769,9.070,95.717)
C8: (-30.044,10.253,97.023)
O2': (-28.761,6.573,94.253)
C6: (-32.141,8.877,99.421)
C5: (-31.270,9.283,98.426)
C4: (-30.589,8.284,97.758)
P: (-28.078,13.136,95.013)
C4': (-27.676,9.353,94.304)
C2': (-29.420,7.773,94.634)
C2: (-31.527,6.707,98.927)
N1: (-32.266,7.555,99.652)
N3: (-30.656,6.961,97.957)
N6: (-32.852,9.738,100.131)
N7: (-30.933,10.531,97.957)
N9: (-29.812,8.912,96.832)
O5': (-28.368,11.623,94.639)
O3': (-28.874,8.518,92.379)
OP1: (-33.766,-4.558,100.619)
OP2: (-34.712,-3.516,102.731)
C3': (-32.661,0.542,99.862)
C1': (-34.704,1.698,99.881)
C5': (-33.706,-1.781,99.476)
O6: (-35.268,4.295,105.235)
O4': (-34.957,0.326,99.593)
C8: (-35.464,1.154,102.316)
C2: (-34.228,5.352,102.044)
C6: (-35.014,4.205,104.033)
C5: (-35.130,3.065,103.195)
C4: (-34.788,3.207,101.870)
P: (-34.550,-3.482,101.272)
C4': (-33.705,-0.302,99.174)
C2': (-33.221,1.926,99.590)
O2': (-33.105,2.233,98.210)
N1: (-34.542,5.319,103.366)
N2: (-33.791,6.538,101.588)
N3: (-34.348,4.309,101.239)
N7: (-35.564,1.769,103.474)
N9: (-35.010,1.979,101.299)
O5': (-33.999,-2.056,100.836)
O3': (-31.373,0.356,99.332)
OP2: (-34.712,-3.516,102.731)
C3': (-32.661,0.542,99.862)
C1': (-34.704,1.698,99.881)
C5': (-33.706,-1.781,99.476)
O6: (-35.268,4.295,105.235)
O4': (-34.957,0.326,99.593)
C8: (-35.464,1.154,102.316)
C2: (-34.228,5.352,102.044)
C6: (-35.014,4.205,104.033)
C5: (-35.130,3.065,103.195)
C4: (-34.788,3.207,101.870)
P: (-34.550,-3.482,101.272)
C4': (-33.705,-0.302,99.174)
C2': (-33.221,1.926,99.590)
O2': (-33.105,2.233,98.210)
N1: (-34.542,5.319,103.366)
N2: (-33.791,6.538,101.588)
N3: (-34.348,4.309,101.239)
N7: (-35.564,1.769,103.474)
N9: (-35.010,1.979,101.299)
O5': (-33.999,-2.056,100.836)
O3': (-31.373,0.356,99.332)
Image (generated by PyMOL):