Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1906:12566
Extra
PDB:
ATOM 1 O3' C A 905 36.109 -21.066 63.815 1.00 43.27 O
ATOM 2 P A A 906 36.679 -19.668 64.295 1.00 35.64 P
ATOM 3 OP1 A A 906 36.045 -19.395 65.618 1.00 35.62 O
ATOM 4 OP2 A A 906 36.479 -18.694 63.170 1.00 35.60 O
ATOM 5 O5' A A 906 38.245 -19.946 64.499 1.00 35.62 O
ATOM 6 C5' A A 906 39.207 -19.496 63.554 1.00 35.59 C
ATOM 7 C4' A A 906 40.369 -18.801 64.217 1.00 35.52 C
ATOM 8 O4' A A 906 39.969 -17.453 64.537 1.00 35.44 O
ATOM 9 C3' A A 906 40.870 -19.424 65.520 1.00 35.55 C
ATOM 10 O3' A A 906 42.271 -19.312 65.620 1.00 35.54 O
ATOM 11 C2' A A 906 40.278 -18.523 66.566 1.00 35.49 C
ATOM 12 O2' A A 906 40.987 -18.491 67.800 1.00 35.50 O
ATOM 13 C1' A A 906 40.265 -17.176 65.869 1.00 35.42 C
ATOM 14 N9 A A 906 39.257 -16.286 66.424 1.00 35.38 N
ATOM 15 C8 A A 906 38.028 -16.679 66.826 1.00 35.42 C
ATOM 16 N7 A A 906 37.393 -15.744 67.458 1.00 35.39 N
ATOM 17 C5 A A 906 38.250 -14.672 67.505 1.00 35.34 C
ATOM 18 C6 A A 906 38.156 -13.360 68.053 1.00 35.30 C
ATOM 19 N6 A A 906 37.068 -12.875 68.679 1.00 35.32 N
ATOM 20 N1 A A 906 39.182 -12.519 67.931 1.00 35.27 N
ATOM 21 C2 A A 906 40.223 -13.026 67.311 1.00 35.26 C
ATOM 22 N3 A A 906 40.477 -14.231 66.769 1.00 35.29 N
ATOM 23 C4 A A 906 39.412 -15.022 66.882 1.00 35.33 C
ATOM 24 P G A 907 43.246 -20.429 65.041 1.00 33.33 P
ATOM 25 OP1 G A 907 44.387 -19.737 64.528 1.00 33.30 O
ATOM 26 OP2 G A 907 42.499 -21.265 64.135 1.00 33.40 O
ATOM 27 O5' G A 907 43.623 -21.261 66.309 1.00 33.40 O
TER
ATOM 1 O3' A B2565 42.164 -8.065 75.238 1.00 41.33 O
ATOM 2 P G B2566 42.495 -6.968 74.115 1.00 34.17 P
ATOM 3 OP1 G B2566 43.956 -6.654 74.245 1.00 34.20 O
ATOM 4 OP2 G B2566 41.533 -5.876 74.238 1.00 34.20 O
ATOM 5 O5' G B2566 42.245 -7.799 72.779 1.00 34.10 O
ATOM 6 C5' G B2566 41.438 -7.333 71.713 1.00 34.05 C
ATOM 7 C4' G B2566 40.933 -8.512 70.936 1.00 34.02 C
ATOM 8 O4' G B2566 39.859 -9.149 71.666 1.00 34.05 O
ATOM 9 C3' G B2566 40.353 -8.246 69.571 1.00 33.98 C
ATOM 10 O3' G B2566 41.338 -8.160 68.579 1.00 33.96 O
ATOM 11 C2' G B2566 39.432 -9.438 69.379 1.00 33.99 C
ATOM 12 O2' G B2566 40.167 -10.593 69.076 1.00 33.98 O
ATOM 13 C1' G B2566 38.884 -9.617 70.771 1.00 34.03 C
ATOM 14 N9 G B2566 37.670 -8.828 70.937 1.00 34.05 N
ATOM 15 C8 G B2566 37.493 -7.732 71.699 1.00 34.09 C
ATOM 16 N7 G B2566 36.308 -7.283 71.521 1.00 34.12 N
ATOM 17 C5 G B2566 35.706 -8.099 70.607 1.00 34.09 C
ATOM 18 C6 G B2566 34.408 -8.057 70.096 1.00 34.12 C
ATOM 19 O6 G B2566 33.574 -7.190 70.406 1.00 34.17 O
ATOM 20 N1 G B2566 34.156 -9.104 69.203 1.00 34.11 N
ATOM 21 C2 G B2566 35.095 -10.051 68.863 1.00 34.07 C
ATOM 22 N2 G B2566 34.718 -11.000 67.998 1.00 34.08 N
ATOM 23 N3 G B2566 36.328 -10.095 69.353 1.00 34.05 N
ATOM 24 C4 G B2566 36.547 -9.080 70.218 1.00 34.06 C
ATOM 25 P G B2567 41.223 -7.091 67.386 1.00 36.61 P
ATOM 26 OP1 G B2567 42.556 -7.013 66.773 1.00 36.60 O
ATOM 27 OP2 G B2567 40.631 -5.849 67.938 1.00 36.64 O
ATOM 28 O5' G B2567 40.205 -7.777 66.398 1.00 36.60 O
TER
ATOM 2 P A A 906 36.679 -19.668 64.295 1.00 35.64 P
ATOM 3 OP1 A A 906 36.045 -19.395 65.618 1.00 35.62 O
ATOM 4 OP2 A A 906 36.479 -18.694 63.170 1.00 35.60 O
ATOM 5 O5' A A 906 38.245 -19.946 64.499 1.00 35.62 O
ATOM 6 C5' A A 906 39.207 -19.496 63.554 1.00 35.59 C
ATOM 7 C4' A A 906 40.369 -18.801 64.217 1.00 35.52 C
ATOM 8 O4' A A 906 39.969 -17.453 64.537 1.00 35.44 O
ATOM 9 C3' A A 906 40.870 -19.424 65.520 1.00 35.55 C
ATOM 10 O3' A A 906 42.271 -19.312 65.620 1.00 35.54 O
ATOM 11 C2' A A 906 40.278 -18.523 66.566 1.00 35.49 C
ATOM 12 O2' A A 906 40.987 -18.491 67.800 1.00 35.50 O
ATOM 13 C1' A A 906 40.265 -17.176 65.869 1.00 35.42 C
ATOM 14 N9 A A 906 39.257 -16.286 66.424 1.00 35.38 N
ATOM 15 C8 A A 906 38.028 -16.679 66.826 1.00 35.42 C
ATOM 16 N7 A A 906 37.393 -15.744 67.458 1.00 35.39 N
ATOM 17 C5 A A 906 38.250 -14.672 67.505 1.00 35.34 C
ATOM 18 C6 A A 906 38.156 -13.360 68.053 1.00 35.30 C
ATOM 19 N6 A A 906 37.068 -12.875 68.679 1.00 35.32 N
ATOM 20 N1 A A 906 39.182 -12.519 67.931 1.00 35.27 N
ATOM 21 C2 A A 906 40.223 -13.026 67.311 1.00 35.26 C
ATOM 22 N3 A A 906 40.477 -14.231 66.769 1.00 35.29 N
ATOM 23 C4 A A 906 39.412 -15.022 66.882 1.00 35.33 C
ATOM 24 P G A 907 43.246 -20.429 65.041 1.00 33.33 P
ATOM 25 OP1 G A 907 44.387 -19.737 64.528 1.00 33.30 O
ATOM 26 OP2 G A 907 42.499 -21.265 64.135 1.00 33.40 O
ATOM 27 O5' G A 907 43.623 -21.261 66.309 1.00 33.40 O
TER
ATOM 1 O3' A B2565 42.164 -8.065 75.238 1.00 41.33 O
ATOM 2 P G B2566 42.495 -6.968 74.115 1.00 34.17 P
ATOM 3 OP1 G B2566 43.956 -6.654 74.245 1.00 34.20 O
ATOM 4 OP2 G B2566 41.533 -5.876 74.238 1.00 34.20 O
ATOM 5 O5' G B2566 42.245 -7.799 72.779 1.00 34.10 O
ATOM 6 C5' G B2566 41.438 -7.333 71.713 1.00 34.05 C
ATOM 7 C4' G B2566 40.933 -8.512 70.936 1.00 34.02 C
ATOM 8 O4' G B2566 39.859 -9.149 71.666 1.00 34.05 O
ATOM 9 C3' G B2566 40.353 -8.246 69.571 1.00 33.98 C
ATOM 10 O3' G B2566 41.338 -8.160 68.579 1.00 33.96 O
ATOM 11 C2' G B2566 39.432 -9.438 69.379 1.00 33.99 C
ATOM 12 O2' G B2566 40.167 -10.593 69.076 1.00 33.98 O
ATOM 13 C1' G B2566 38.884 -9.617 70.771 1.00 34.03 C
ATOM 14 N9 G B2566 37.670 -8.828 70.937 1.00 34.05 N
ATOM 15 C8 G B2566 37.493 -7.732 71.699 1.00 34.09 C
ATOM 16 N7 G B2566 36.308 -7.283 71.521 1.00 34.12 N
ATOM 17 C5 G B2566 35.706 -8.099 70.607 1.00 34.09 C
ATOM 18 C6 G B2566 34.408 -8.057 70.096 1.00 34.12 C
ATOM 19 O6 G B2566 33.574 -7.190 70.406 1.00 34.17 O
ATOM 20 N1 G B2566 34.156 -9.104 69.203 1.00 34.11 N
ATOM 21 C2 G B2566 35.095 -10.051 68.863 1.00 34.07 C
ATOM 22 N2 G B2566 34.718 -11.000 67.998 1.00 34.08 N
ATOM 23 N3 G B2566 36.328 -10.095 69.353 1.00 34.05 N
ATOM 24 C4 G B2566 36.547 -9.080 70.218 1.00 34.06 C
ATOM 25 P G B2567 41.223 -7.091 67.386 1.00 36.61 P
ATOM 26 OP1 G B2567 42.556 -7.013 66.773 1.00 36.60 O
ATOM 27 OP2 G B2567 40.631 -5.849 67.938 1.00 36.64 O
ATOM 28 O5' G B2567 40.205 -7.777 66.398 1.00 36.60 O
TER
Atoms:
OP1: (36.045,-19.395,65.618)
OP2: (36.479,-18.694,63.170)
C3': (40.870,-19.424,65.520)
C1': (40.265,-17.176,65.869)
C5': (39.207,-19.496,63.554)
O4': (39.969,-17.453,64.537)
C8: (38.028,-16.679,66.826)
O2': (40.987,-18.491,67.800)
C6: (38.156,-13.360,68.053)
C5: (38.250,-14.672,67.505)
C4: (39.412,-15.022,66.882)
P: (36.679,-19.668,64.295)
C4': (40.369,-18.801,64.217)
C2': (40.278,-18.523,66.566)
C2: (40.223,-13.026,67.311)
N1: (39.182,-12.519,67.931)
N3: (40.477,-14.231,66.769)
N6: (37.068,-12.875,68.679)
N7: (37.393,-15.744,67.458)
N9: (39.257,-16.286,66.424)
O5': (38.245,-19.946,64.499)
O3': (42.271,-19.312,65.620)
OP2: (36.479,-18.694,63.170)
C3': (40.870,-19.424,65.520)
C1': (40.265,-17.176,65.869)
C5': (39.207,-19.496,63.554)
O4': (39.969,-17.453,64.537)
C8: (38.028,-16.679,66.826)
O2': (40.987,-18.491,67.800)
C6: (38.156,-13.360,68.053)
C5: (38.250,-14.672,67.505)
C4: (39.412,-15.022,66.882)
P: (36.679,-19.668,64.295)
C4': (40.369,-18.801,64.217)
C2': (40.278,-18.523,66.566)
C2: (40.223,-13.026,67.311)
N1: (39.182,-12.519,67.931)
N3: (40.477,-14.231,66.769)
N6: (37.068,-12.875,68.679)
N7: (37.393,-15.744,67.458)
N9: (39.257,-16.286,66.424)
O5': (38.245,-19.946,64.499)
O3': (42.271,-19.312,65.620)
OP1: (43.956,-6.654,74.245)
OP2: (41.533,-5.876,74.238)
C3': (40.353,-8.246,69.571)
C1': (38.884,-9.617,70.771)
C5': (41.438,-7.333,71.713)
O6: (33.574,-7.190,70.406)
O4': (39.859,-9.149,71.666)
C8: (37.493,-7.732,71.699)
C2: (35.095,-10.051,68.863)
C6: (34.408,-8.057,70.096)
C5: (35.706,-8.099,70.607)
C4: (36.547,-9.080,70.218)
P: (42.495,-6.968,74.115)
C4': (40.933,-8.512,70.936)
C2': (39.432,-9.438,69.379)
O2': (40.167,-10.593,69.076)
N1: (34.156,-9.104,69.203)
N2: (34.718,-11.000,67.998)
N3: (36.328,-10.095,69.353)
N7: (36.308,-7.283,71.521)
N9: (37.670,-8.828,70.937)
O5': (42.245,-7.799,72.779)
O3': (41.338,-8.160,68.579)
OP2: (41.533,-5.876,74.238)
C3': (40.353,-8.246,69.571)
C1': (38.884,-9.617,70.771)
C5': (41.438,-7.333,71.713)
O6: (33.574,-7.190,70.406)
O4': (39.859,-9.149,71.666)
C8: (37.493,-7.732,71.699)
C2: (35.095,-10.051,68.863)
C6: (34.408,-8.057,70.096)
C5: (35.706,-8.099,70.607)
C4: (36.547,-9.080,70.218)
P: (42.495,-6.968,74.115)
C4': (40.933,-8.512,70.936)
C2': (39.432,-9.438,69.379)
O2': (40.167,-10.593,69.076)
N1: (34.156,-9.104,69.203)
N2: (34.718,-11.000,67.998)
N3: (36.328,-10.095,69.353)
N7: (36.308,-7.283,71.521)
N9: (37.670,-8.828,70.937)
O5': (42.245,-7.799,72.779)
O3': (41.338,-8.160,68.579)
Image (generated by PyMOL):