Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:436:435
Extra
PDB:
ATOM 1 O3' G A 35 59.433 -6.624 132.991 1.00 48.49 O
ATOM 2 P A A 36 59.132 -7.391 134.381 1.00 57.33 P
ATOM 3 OP1 A A 36 60.422 -7.769 134.968 1.00 57.80 O
ATOM 4 OP2 A A 36 58.152 -8.466 134.112 1.00 56.99 O
ATOM 5 O5' A A 36 58.459 -6.243 135.262 1.00 57.86 O
ATOM 6 C5' A A 36 57.163 -5.755 134.952 1.00 57.59 C
ATOM 7 C4' A A 36 56.363 -5.506 136.199 1.00 58.25 C
ATOM 8 O4' A A 36 55.017 -5.125 135.834 1.00 57.96 O
ATOM 9 C3' A A 36 56.236 -6.690 137.136 1.00 58.67 C
ATOM 10 O3' A A 36 56.228 -6.225 138.465 1.00 59.51 O
ATOM 11 C2' A A 36 54.867 -7.249 136.805 1.00 58.31 C
ATOM 12 O2' A A 36 54.253 -7.920 137.871 1.00 58.83 O
ATOM 13 C1' A A 36 54.090 -6.003 136.424 1.00 58.15 C
ATOM 14 N9 A A 36 53.034 -6.245 135.439 1.00 57.48 N
ATOM 15 C8 A A 36 51.702 -5.952 135.507 1.00 57.48 C
ATOM 16 N7 A A 36 51.034 -6.267 134.426 1.00 56.80 N
ATOM 17 C5 A A 36 51.980 -6.817 133.582 1.00 56.33 C
ATOM 18 C6 A A 36 51.913 -7.344 132.282 1.00 55.57 C
ATOM 19 N6 A A 36 50.808 -7.418 131.571 1.00 55.13 N
ATOM 20 N1 A A 36 53.026 -7.803 131.704 1.00 55.28 N
ATOM 21 C2 A A 36 54.149 -7.712 132.415 1.00 55.75 C
ATOM 22 N3 A A 36 54.364 -7.239 133.654 1.00 56.48 N
ATOM 23 C4 A A 36 53.214 -6.804 134.195 1.00 56.74 C
ATOM 24 P U A 37 57.261 -6.821 139.535 1.00 54.86 P
ATOM 25 OP1 U A 37 57.449 -8.254 139.202 1.00 54.54 O
ATOM 26 OP2 U A 37 56.749 -6.447 140.892 1.00 55.69 O
ATOM 27 O5' U A 37 58.597 -6.012 139.223 1.00 54.90 O
TER
ATOM 1 O3' C B 34 63.616 -8.034 129.273 1.00 49.08 O
ATOM 2 P G B 35 63.204 -8.656 130.656 1.00 47.64 P
ATOM 3 OP1 G B 35 64.126 -8.116 131.660 1.00 48.35 O
ATOM 4 OP2 G B 35 63.118 -10.148 130.454 1.00 47.44 O
ATOM 5 O5' G B 35 61.751 -8.078 130.881 1.00 47.57 O
ATOM 6 C5' G B 35 61.420 -6.771 130.507 1.00 47.42 C
ATOM 7 C4' G B 35 59.951 -6.572 130.607 1.00 47.28 C
ATOM 8 O4' G B 35 59.312 -7.131 129.437 1.00 46.55 O
ATOM 9 C3' G B 35 59.264 -7.282 131.754 1.00 47.75 C
ATOM 10 O3' G B 35 59.433 -6.624 132.991 1.00 48.49 O
ATOM 11 C2' G B 35 57.817 -7.333 131.266 1.00 47.32 C
ATOM 12 O2' G B 35 57.192 -6.058 131.390 1.00 47.42 O
ATOM 13 C1' G B 35 58.032 -7.643 129.782 1.00 46.54 C
ATOM 14 N9 G B 35 58.049 -9.089 129.549 1.00 46.33 N
ATOM 15 C8 G B 35 59.116 -9.929 129.366 1.00 46.32 C
ATOM 16 N7 G B 35 58.797 -11.200 129.275 1.00 46.19 N
ATOM 17 C5 G B 35 57.425 -11.170 129.413 1.00 46.11 C
ATOM 18 C6 G B 35 56.449 -12.181 129.415 1.00 45.98 C
ATOM 19 O6 G B 35 56.563 -13.373 129.260 1.00 45.89 O
ATOM 20 N1 G B 35 55.188 -11.717 129.624 1.00 45.99 N
ATOM 21 C2 G B 35 54.873 -10.431 129.797 1.00 46.09 C
ATOM 22 N2 G B 35 53.598 -10.155 129.977 1.00 46.10 N
ATOM 23 N3 G B 35 55.748 -9.464 129.813 1.00 46.22 N
ATOM 24 C4 G B 35 56.985 -9.893 129.608 1.00 46.21 C
ATOM 25 P A B 36 59.132 -7.391 134.381 1.00 57.33 P
ATOM 26 OP1 A B 36 60.422 -7.769 134.968 1.00 57.80 O
ATOM 27 OP2 A B 36 58.152 -8.466 134.112 1.00 56.99 O
ATOM 28 O5' A B 36 58.459 -6.243 135.262 1.00 57.86 O
TER
ATOM 2 P A A 36 59.132 -7.391 134.381 1.00 57.33 P
ATOM 3 OP1 A A 36 60.422 -7.769 134.968 1.00 57.80 O
ATOM 4 OP2 A A 36 58.152 -8.466 134.112 1.00 56.99 O
ATOM 5 O5' A A 36 58.459 -6.243 135.262 1.00 57.86 O
ATOM 6 C5' A A 36 57.163 -5.755 134.952 1.00 57.59 C
ATOM 7 C4' A A 36 56.363 -5.506 136.199 1.00 58.25 C
ATOM 8 O4' A A 36 55.017 -5.125 135.834 1.00 57.96 O
ATOM 9 C3' A A 36 56.236 -6.690 137.136 1.00 58.67 C
ATOM 10 O3' A A 36 56.228 -6.225 138.465 1.00 59.51 O
ATOM 11 C2' A A 36 54.867 -7.249 136.805 1.00 58.31 C
ATOM 12 O2' A A 36 54.253 -7.920 137.871 1.00 58.83 O
ATOM 13 C1' A A 36 54.090 -6.003 136.424 1.00 58.15 C
ATOM 14 N9 A A 36 53.034 -6.245 135.439 1.00 57.48 N
ATOM 15 C8 A A 36 51.702 -5.952 135.507 1.00 57.48 C
ATOM 16 N7 A A 36 51.034 -6.267 134.426 1.00 56.80 N
ATOM 17 C5 A A 36 51.980 -6.817 133.582 1.00 56.33 C
ATOM 18 C6 A A 36 51.913 -7.344 132.282 1.00 55.57 C
ATOM 19 N6 A A 36 50.808 -7.418 131.571 1.00 55.13 N
ATOM 20 N1 A A 36 53.026 -7.803 131.704 1.00 55.28 N
ATOM 21 C2 A A 36 54.149 -7.712 132.415 1.00 55.75 C
ATOM 22 N3 A A 36 54.364 -7.239 133.654 1.00 56.48 N
ATOM 23 C4 A A 36 53.214 -6.804 134.195 1.00 56.74 C
ATOM 24 P U A 37 57.261 -6.821 139.535 1.00 54.86 P
ATOM 25 OP1 U A 37 57.449 -8.254 139.202 1.00 54.54 O
ATOM 26 OP2 U A 37 56.749 -6.447 140.892 1.00 55.69 O
ATOM 27 O5' U A 37 58.597 -6.012 139.223 1.00 54.90 O
TER
ATOM 1 O3' C B 34 63.616 -8.034 129.273 1.00 49.08 O
ATOM 2 P G B 35 63.204 -8.656 130.656 1.00 47.64 P
ATOM 3 OP1 G B 35 64.126 -8.116 131.660 1.00 48.35 O
ATOM 4 OP2 G B 35 63.118 -10.148 130.454 1.00 47.44 O
ATOM 5 O5' G B 35 61.751 -8.078 130.881 1.00 47.57 O
ATOM 6 C5' G B 35 61.420 -6.771 130.507 1.00 47.42 C
ATOM 7 C4' G B 35 59.951 -6.572 130.607 1.00 47.28 C
ATOM 8 O4' G B 35 59.312 -7.131 129.437 1.00 46.55 O
ATOM 9 C3' G B 35 59.264 -7.282 131.754 1.00 47.75 C
ATOM 10 O3' G B 35 59.433 -6.624 132.991 1.00 48.49 O
ATOM 11 C2' G B 35 57.817 -7.333 131.266 1.00 47.32 C
ATOM 12 O2' G B 35 57.192 -6.058 131.390 1.00 47.42 O
ATOM 13 C1' G B 35 58.032 -7.643 129.782 1.00 46.54 C
ATOM 14 N9 G B 35 58.049 -9.089 129.549 1.00 46.33 N
ATOM 15 C8 G B 35 59.116 -9.929 129.366 1.00 46.32 C
ATOM 16 N7 G B 35 58.797 -11.200 129.275 1.00 46.19 N
ATOM 17 C5 G B 35 57.425 -11.170 129.413 1.00 46.11 C
ATOM 18 C6 G B 35 56.449 -12.181 129.415 1.00 45.98 C
ATOM 19 O6 G B 35 56.563 -13.373 129.260 1.00 45.89 O
ATOM 20 N1 G B 35 55.188 -11.717 129.624 1.00 45.99 N
ATOM 21 C2 G B 35 54.873 -10.431 129.797 1.00 46.09 C
ATOM 22 N2 G B 35 53.598 -10.155 129.977 1.00 46.10 N
ATOM 23 N3 G B 35 55.748 -9.464 129.813 1.00 46.22 N
ATOM 24 C4 G B 35 56.985 -9.893 129.608 1.00 46.21 C
ATOM 25 P A B 36 59.132 -7.391 134.381 1.00 57.33 P
ATOM 26 OP1 A B 36 60.422 -7.769 134.968 1.00 57.80 O
ATOM 27 OP2 A B 36 58.152 -8.466 134.112 1.00 56.99 O
ATOM 28 O5' A B 36 58.459 -6.243 135.262 1.00 57.86 O
TER
Atoms:
OP1: (60.422,-7.769,134.968)
OP2: (58.152,-8.466,134.112)
C3': (56.236,-6.690,137.136)
C1': (54.090,-6.003,136.424)
C5': (57.163,-5.755,134.952)
O4': (55.017,-5.125,135.834)
C8: (51.702,-5.952,135.507)
O2': (54.253,-7.920,137.871)
C6: (51.913,-7.344,132.282)
C5: (51.980,-6.817,133.582)
C4: (53.214,-6.804,134.195)
P: (59.132,-7.391,134.381)
C4': (56.363,-5.506,136.199)
C2': (54.867,-7.249,136.805)
C2: (54.149,-7.712,132.415)
N1: (53.026,-7.803,131.704)
N3: (54.364,-7.239,133.654)
N6: (50.808,-7.418,131.571)
N7: (51.034,-6.267,134.426)
N9: (53.034,-6.245,135.439)
O5': (58.459,-6.243,135.262)
O3': (56.228,-6.225,138.465)
OP2: (58.152,-8.466,134.112)
C3': (56.236,-6.690,137.136)
C1': (54.090,-6.003,136.424)
C5': (57.163,-5.755,134.952)
O4': (55.017,-5.125,135.834)
C8: (51.702,-5.952,135.507)
O2': (54.253,-7.920,137.871)
C6: (51.913,-7.344,132.282)
C5: (51.980,-6.817,133.582)
C4: (53.214,-6.804,134.195)
P: (59.132,-7.391,134.381)
C4': (56.363,-5.506,136.199)
C2': (54.867,-7.249,136.805)
C2: (54.149,-7.712,132.415)
N1: (53.026,-7.803,131.704)
N3: (54.364,-7.239,133.654)
N6: (50.808,-7.418,131.571)
N7: (51.034,-6.267,134.426)
N9: (53.034,-6.245,135.439)
O5': (58.459,-6.243,135.262)
O3': (56.228,-6.225,138.465)
OP1: (64.126,-8.116,131.660)
OP2: (63.118,-10.148,130.454)
C3': (59.264,-7.282,131.754)
C1': (58.032,-7.643,129.782)
C5': (61.420,-6.771,130.507)
O6: (56.563,-13.373,129.260)
O4': (59.312,-7.131,129.437)
C8: (59.116,-9.929,129.366)
C2: (54.873,-10.431,129.797)
C6: (56.449,-12.181,129.415)
C5: (57.425,-11.170,129.413)
C4: (56.985,-9.893,129.608)
P: (63.204,-8.656,130.656)
C4': (59.951,-6.572,130.607)
C2': (57.817,-7.333,131.266)
O2': (57.192,-6.058,131.390)
N1: (55.188,-11.717,129.624)
N2: (53.598,-10.155,129.977)
N3: (55.748,-9.464,129.813)
N7: (58.797,-11.200,129.275)
N9: (58.049,-9.089,129.549)
O5': (61.751,-8.078,130.881)
O3': (59.433,-6.624,132.991)
OP2: (63.118,-10.148,130.454)
C3': (59.264,-7.282,131.754)
C1': (58.032,-7.643,129.782)
C5': (61.420,-6.771,130.507)
O6: (56.563,-13.373,129.260)
O4': (59.312,-7.131,129.437)
C8: (59.116,-9.929,129.366)
C2: (54.873,-10.431,129.797)
C6: (56.449,-12.181,129.415)
C5: (57.425,-11.170,129.413)
C4: (56.985,-9.893,129.608)
P: (63.204,-8.656,130.656)
C4': (59.951,-6.572,130.607)
C2': (57.817,-7.333,131.266)
O2': (57.192,-6.058,131.390)
N1: (55.188,-11.717,129.624)
N2: (53.598,-10.155,129.977)
N3: (55.748,-9.464,129.813)
N7: (58.797,-11.200,129.275)
N9: (58.049,-9.089,129.549)
O5': (61.751,-8.078,130.881)
O3': (59.433,-6.624,132.991)
Image (generated by PyMOL):