Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQM:01087:01086
Extra
PDB:
ATOM 1 O3' C A1086 49.550 100.495 114.942 1.00 57.23 O
ATOM 2 P U A1087 48.325 100.168 115.936 1.00 57.40 P
ATOM 3 OP1 U A1087 48.875 100.146 117.313 1.00 58.98 O
ATOM 4 OP2 U A1087 47.614 98.972 115.418 1.00 55.73 O
ATOM 5 O5' U A1087 47.363 101.431 115.810 1.00 55.98 O
ATOM 6 C5' U A1087 47.804 102.732 116.218 1.00 55.66 C
ATOM 7 C4' U A1087 46.678 103.734 116.098 1.00 57.01 C
ATOM 8 O4' U A1087 46.370 103.961 114.692 1.00 57.43 O
ATOM 9 C3' U A1087 45.358 103.355 116.764 1.00 56.85 C
ATOM 10 O3' U A1087 44.758 104.521 117.307 1.00 57.43 O
ATOM 11 C2' U A1087 44.528 102.845 115.591 1.00 56.00 C
ATOM 12 O2' U A1087 43.139 102.956 115.814 1.00 56.00 O
ATOM 13 C1' U A1087 44.987 103.785 114.478 1.00 54.50 C
ATOM 14 N1 U A1087 44.786 103.292 113.106 1.00 53.13 N
ATOM 15 C2 U A1087 44.057 104.093 112.230 1.00 51.57 C
ATOM 16 O2 U A1087 43.586 105.170 112.538 1.00 52.02 O
ATOM 17 N3 U A1087 43.898 103.582 110.972 1.00 51.12 N
ATOM 18 C4 U A1087 44.368 102.382 110.499 1.00 52.34 C
ATOM 19 O4 U A1087 44.126 102.064 109.335 1.00 54.25 O
ATOM 20 C5 U A1087 45.115 101.607 111.453 1.00 53.54 C
ATOM 21 C6 U A1087 45.296 102.079 112.692 1.00 53.36 C
ATOM 22 P C A1088 44.781 104.757 118.898 1.00 60.21 P
ATOM 23 OP1 C A1088 44.151 106.085 119.185 1.00 59.24 O
ATOM 24 OP2 C A1088 46.174 104.496 119.354 1.00 60.50 O
ATOM 25 O5' C A1088 43.847 103.596 119.467 1.00 58.43 O
TER
ATOM 1 O3' C B1085 45.615 98.200 111.598 1.00 58.08 O
ATOM 2 P C B1086 47.074 98.167 110.928 1.00 57.82 P
ATOM 3 OP1 C B1086 46.963 98.874 109.627 1.00 59.23 O
ATOM 4 OP2 C B1086 47.587 96.771 110.966 1.00 59.10 O
ATOM 5 O5' C B1086 47.949 99.062 111.908 1.00 56.45 O
ATOM 6 C5' C B1086 49.304 98.725 112.228 1.00 52.86 C
ATOM 7 C4' C B1086 50.047 99.976 112.609 1.00 55.08 C
ATOM 8 O4' C B1086 50.228 100.789 111.420 1.00 55.32 O
ATOM 9 C3' C B1086 49.300 100.874 113.585 1.00 56.37 C
ATOM 10 O3' C B1086 49.550 100.495 114.942 1.00 57.23 O
ATOM 11 C2' C B1086 49.875 102.248 113.269 1.00 56.15 C
ATOM 12 O2' C B1086 51.121 102.468 113.898 1.00 60.26 O
ATOM 13 C1' C B1086 50.085 102.157 111.751 1.00 54.71 C
ATOM 14 N1 C B1086 48.999 102.731 110.928 1.00 53.28 N
ATOM 15 C2 C B1086 48.611 104.057 111.149 1.00 53.16 C
ATOM 16 O2 C B1086 49.190 104.716 112.028 1.00 56.83 O
ATOM 17 N3 C B1086 47.622 104.590 110.398 1.00 51.59 N
ATOM 18 C4 C B1086 47.038 103.862 109.449 1.00 50.44 C
ATOM 19 N4 C B1086 46.082 104.440 108.725 1.00 49.29 N
ATOM 20 C5 C B1086 47.410 102.511 109.200 1.00 51.32 C
ATOM 21 C6 C B1086 48.382 101.988 109.958 1.00 52.86 C
ATOM 22 P U B1087 48.325 100.168 115.936 1.00 57.40 P
ATOM 23 OP1 U B1087 48.875 100.146 117.313 1.00 58.98 O
ATOM 24 OP2 U B1087 47.614 98.972 115.418 1.00 55.73 O
ATOM 25 O5' U B1087 47.363 101.431 115.810 1.00 55.98 O
TER
ATOM 2 P U A1087 48.325 100.168 115.936 1.00 57.40 P
ATOM 3 OP1 U A1087 48.875 100.146 117.313 1.00 58.98 O
ATOM 4 OP2 U A1087 47.614 98.972 115.418 1.00 55.73 O
ATOM 5 O5' U A1087 47.363 101.431 115.810 1.00 55.98 O
ATOM 6 C5' U A1087 47.804 102.732 116.218 1.00 55.66 C
ATOM 7 C4' U A1087 46.678 103.734 116.098 1.00 57.01 C
ATOM 8 O4' U A1087 46.370 103.961 114.692 1.00 57.43 O
ATOM 9 C3' U A1087 45.358 103.355 116.764 1.00 56.85 C
ATOM 10 O3' U A1087 44.758 104.521 117.307 1.00 57.43 O
ATOM 11 C2' U A1087 44.528 102.845 115.591 1.00 56.00 C
ATOM 12 O2' U A1087 43.139 102.956 115.814 1.00 56.00 O
ATOM 13 C1' U A1087 44.987 103.785 114.478 1.00 54.50 C
ATOM 14 N1 U A1087 44.786 103.292 113.106 1.00 53.13 N
ATOM 15 C2 U A1087 44.057 104.093 112.230 1.00 51.57 C
ATOM 16 O2 U A1087 43.586 105.170 112.538 1.00 52.02 O
ATOM 17 N3 U A1087 43.898 103.582 110.972 1.00 51.12 N
ATOM 18 C4 U A1087 44.368 102.382 110.499 1.00 52.34 C
ATOM 19 O4 U A1087 44.126 102.064 109.335 1.00 54.25 O
ATOM 20 C5 U A1087 45.115 101.607 111.453 1.00 53.54 C
ATOM 21 C6 U A1087 45.296 102.079 112.692 1.00 53.36 C
ATOM 22 P C A1088 44.781 104.757 118.898 1.00 60.21 P
ATOM 23 OP1 C A1088 44.151 106.085 119.185 1.00 59.24 O
ATOM 24 OP2 C A1088 46.174 104.496 119.354 1.00 60.50 O
ATOM 25 O5' C A1088 43.847 103.596 119.467 1.00 58.43 O
TER
ATOM 1 O3' C B1085 45.615 98.200 111.598 1.00 58.08 O
ATOM 2 P C B1086 47.074 98.167 110.928 1.00 57.82 P
ATOM 3 OP1 C B1086 46.963 98.874 109.627 1.00 59.23 O
ATOM 4 OP2 C B1086 47.587 96.771 110.966 1.00 59.10 O
ATOM 5 O5' C B1086 47.949 99.062 111.908 1.00 56.45 O
ATOM 6 C5' C B1086 49.304 98.725 112.228 1.00 52.86 C
ATOM 7 C4' C B1086 50.047 99.976 112.609 1.00 55.08 C
ATOM 8 O4' C B1086 50.228 100.789 111.420 1.00 55.32 O
ATOM 9 C3' C B1086 49.300 100.874 113.585 1.00 56.37 C
ATOM 10 O3' C B1086 49.550 100.495 114.942 1.00 57.23 O
ATOM 11 C2' C B1086 49.875 102.248 113.269 1.00 56.15 C
ATOM 12 O2' C B1086 51.121 102.468 113.898 1.00 60.26 O
ATOM 13 C1' C B1086 50.085 102.157 111.751 1.00 54.71 C
ATOM 14 N1 C B1086 48.999 102.731 110.928 1.00 53.28 N
ATOM 15 C2 C B1086 48.611 104.057 111.149 1.00 53.16 C
ATOM 16 O2 C B1086 49.190 104.716 112.028 1.00 56.83 O
ATOM 17 N3 C B1086 47.622 104.590 110.398 1.00 51.59 N
ATOM 18 C4 C B1086 47.038 103.862 109.449 1.00 50.44 C
ATOM 19 N4 C B1086 46.082 104.440 108.725 1.00 49.29 N
ATOM 20 C5 C B1086 47.410 102.511 109.200 1.00 51.32 C
ATOM 21 C6 C B1086 48.382 101.988 109.958 1.00 52.86 C
ATOM 22 P U B1087 48.325 100.168 115.936 1.00 57.40 P
ATOM 23 OP1 U B1087 48.875 100.146 117.313 1.00 58.98 O
ATOM 24 OP2 U B1087 47.614 98.972 115.418 1.00 55.73 O
ATOM 25 O5' U B1087 47.363 101.431 115.810 1.00 55.98 O
TER
Atoms:
C4: (44.368,102.382,110.499)
N3: (43.898,103.582,110.972)
OP1: (48.875,100.146,117.313)
OP2: (47.614,98.972,115.418)
C2: (44.057,104.093,112.230)
C1': (44.987,103.785,114.478)
C3': (45.358,103.355,116.764)
O5': (47.363,101.431,115.810)
O4': (46.370,103.961,114.692)
C5': (47.804,102.732,116.218)
P: (48.325,100.168,115.936)
C4': (46.678,103.734,116.098)
C2': (44.528,102.845,115.591)
O2': (43.139,102.956,115.814)
N1: (44.786,103.292,113.106)
O4: (44.126,102.064,109.335)
O2: (43.586,105.170,112.538)
C6: (45.296,102.079,112.692)
C5: (45.115,101.607,111.453)
O3': (44.758,104.521,117.307)
N3: (43.898,103.582,110.972)
OP1: (48.875,100.146,117.313)
OP2: (47.614,98.972,115.418)
C2: (44.057,104.093,112.230)
C1': (44.987,103.785,114.478)
C3': (45.358,103.355,116.764)
O5': (47.363,101.431,115.810)
O4': (46.370,103.961,114.692)
C5': (47.804,102.732,116.218)
P: (48.325,100.168,115.936)
C4': (46.678,103.734,116.098)
C2': (44.528,102.845,115.591)
O2': (43.139,102.956,115.814)
N1: (44.786,103.292,113.106)
O4: (44.126,102.064,109.335)
O2: (43.586,105.170,112.538)
C6: (45.296,102.079,112.692)
C5: (45.115,101.607,111.453)
O3': (44.758,104.521,117.307)
C2: (48.611,104.057,111.149)
OP1: (46.963,98.874,109.627)
OP2: (47.587,96.771,110.966)
C4: (47.038,103.862,109.449)
O5': (47.949,99.062,111.908)
C3': (49.300,100.874,113.585)
C1': (50.085,102.157,111.751)
O4': (50.228,100.789,111.420)
C5': (49.304,98.725,112.228)
P: (47.074,98.167,110.928)
O2: (49.190,104.716,112.028)
C4': (50.047,99.976,112.609)
C2': (49.875,102.248,113.269)
O2': (51.121,102.468,113.898)
N1: (48.999,102.731,110.928)
N3: (47.622,104.590,110.398)
N4: (46.082,104.440,108.725)
C6: (48.382,101.988,109.958)
C5: (47.410,102.511,109.200)
O3': (49.550,100.495,114.942)
OP1: (46.963,98.874,109.627)
OP2: (47.587,96.771,110.966)
C4: (47.038,103.862,109.449)
O5': (47.949,99.062,111.908)
C3': (49.300,100.874,113.585)
C1': (50.085,102.157,111.751)
O4': (50.228,100.789,111.420)
C5': (49.304,98.725,112.228)
P: (47.074,98.167,110.928)
O2: (49.190,104.716,112.028)
C4': (50.047,99.976,112.609)
C2': (49.875,102.248,113.269)
O2': (51.121,102.468,113.898)
N1: (48.999,102.731,110.928)
N3: (47.622,104.590,110.398)
N4: (46.082,104.440,108.725)
C6: (48.382,101.988,109.958)
C5: (47.410,102.511,109.200)
O3': (49.550,100.495,114.942)
Image (generated by PyMOL):