Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQM:0272:0273
Extra
PDB:
ATOM 1 O3' U A 271 64.314 103.086 -8.116 1.00148.27 O
ATOM 2 P C A 272 62.863 102.409 -7.925 1.00147.88 P
ATOM 3 OP1 C A 272 63.102 101.027 -7.433 1.00148.02 O
ATOM 4 OP2 C A 272 62.049 102.618 -9.151 1.00148.01 O
ATOM 5 O5' C A 272 62.185 103.240 -6.748 1.00146.43 O
ATOM 6 C5' C A 272 62.981 103.969 -5.800 1.00144.53 C
ATOM 7 C4' C A 272 62.433 105.365 -5.631 1.00143.21 C
ATOM 8 O4' C A 272 62.502 106.058 -6.909 1.00143.24 O
ATOM 9 C3' C A 272 60.978 105.446 -5.184 1.00142.36 C
ATOM 10 O3' C A 272 60.811 106.593 -4.356 1.00140.67 O
ATOM 11 C2' C A 272 60.230 105.599 -6.506 1.00142.61 C
ATOM 12 O2' C A 272 58.970 106.228 -6.373 1.00142.67 O
ATOM 13 C1' C A 272 61.206 106.463 -7.309 1.00142.73 C
ATOM 14 N1 C A 272 61.118 106.329 -8.783 1.00142.59 N
ATOM 15 C2 C A 272 61.507 107.417 -9.590 1.00142.56 C
ATOM 16 O2 C A 272 61.904 108.463 -9.051 1.00142.67 O
ATOM 17 N3 C A 272 61.438 107.297 -10.936 1.00142.50 N
ATOM 18 C4 C A 272 61.003 106.160 -11.485 1.00142.52 C
ATOM 19 N4 C A 272 60.954 106.088 -12.818 1.00142.29 N
ATOM 20 C5 C A 272 60.600 105.046 -10.694 1.00142.29 C
ATOM 21 C6 C A 272 60.672 105.172 -9.362 1.00142.32 C
ATOM 22 P A A 273 60.833 106.425 -2.757 1.00139.14 P
ATOM 23 OP1 A A 273 59.651 105.603 -2.380 1.00139.11 O
ATOM 24 OP2 A A 273 61.015 107.768 -2.145 1.00139.08 O
ATOM 25 O5' A A 273 62.157 105.574 -2.493 1.00136.45 O
TER
ATOM 1 O3' C B 272 60.811 106.593 -4.356 1.00140.67 O
ATOM 2 P A B 273 60.833 106.425 -2.757 1.00139.14 P
ATOM 3 OP1 A B 273 59.651 105.603 -2.380 1.00139.11 O
ATOM 4 OP2 A B 273 61.015 107.768 -2.145 1.00139.08 O
ATOM 5 O5' A B 273 62.157 105.574 -2.493 1.00136.45 O
ATOM 6 C5' A B 273 62.108 104.315 -1.791 1.00131.89 C
ATOM 7 C4' A B 273 63.472 103.971 -1.237 1.00128.70 C
ATOM 8 O4' A B 273 64.384 103.646 -2.320 1.00127.95 O
ATOM 9 C3' A B 273 64.175 105.090 -0.488 1.00126.60 C
ATOM 10 O3' A B 273 63.694 105.218 0.845 1.00123.45 O
ATOM 11 C2' A B 273 65.633 104.657 -0.563 1.00126.53 C
ATOM 12 O2' A B 273 65.957 103.653 0.379 1.00126.18 O
ATOM 13 C1' A B 273 65.697 104.073 -1.979 1.00126.93 C
ATOM 14 N9 A B 273 66.151 105.035 -2.988 1.00126.60 N
ATOM 15 C8 A B 273 65.415 105.620 -3.993 1.00126.12 C
ATOM 16 N7 A B 273 66.102 106.453 -4.736 1.00125.93 N
ATOM 17 C5 A B 273 67.377 106.416 -4.188 1.00125.88 C
ATOM 18 C6 A B 273 68.570 107.084 -4.520 1.00125.69 C
ATOM 19 N6 A B 273 68.676 107.956 -5.526 1.00125.91 N
ATOM 20 N1 A B 273 69.665 106.824 -3.773 1.00125.53 N
ATOM 21 C2 A B 273 69.559 105.952 -2.763 1.00125.52 C
ATOM 22 N3 A B 273 68.496 105.263 -2.352 1.00125.75 N
ATOM 23 C4 A B 273 67.424 105.544 -3.114 1.00126.22 C
ATOM 24 P U B 274 63.317 106.672 1.421 1.00121.40 P
ATOM 25 OP1 U B 274 62.608 106.481 2.712 1.00121.42 O
ATOM 26 OP2 U B 274 62.665 107.449 0.332 1.00121.26 O
ATOM 27 O5' U B 274 64.728 107.343 1.721 1.00119.25 O
TER
ATOM 2 P C A 272 62.863 102.409 -7.925 1.00147.88 P
ATOM 3 OP1 C A 272 63.102 101.027 -7.433 1.00148.02 O
ATOM 4 OP2 C A 272 62.049 102.618 -9.151 1.00148.01 O
ATOM 5 O5' C A 272 62.185 103.240 -6.748 1.00146.43 O
ATOM 6 C5' C A 272 62.981 103.969 -5.800 1.00144.53 C
ATOM 7 C4' C A 272 62.433 105.365 -5.631 1.00143.21 C
ATOM 8 O4' C A 272 62.502 106.058 -6.909 1.00143.24 O
ATOM 9 C3' C A 272 60.978 105.446 -5.184 1.00142.36 C
ATOM 10 O3' C A 272 60.811 106.593 -4.356 1.00140.67 O
ATOM 11 C2' C A 272 60.230 105.599 -6.506 1.00142.61 C
ATOM 12 O2' C A 272 58.970 106.228 -6.373 1.00142.67 O
ATOM 13 C1' C A 272 61.206 106.463 -7.309 1.00142.73 C
ATOM 14 N1 C A 272 61.118 106.329 -8.783 1.00142.59 N
ATOM 15 C2 C A 272 61.507 107.417 -9.590 1.00142.56 C
ATOM 16 O2 C A 272 61.904 108.463 -9.051 1.00142.67 O
ATOM 17 N3 C A 272 61.438 107.297 -10.936 1.00142.50 N
ATOM 18 C4 C A 272 61.003 106.160 -11.485 1.00142.52 C
ATOM 19 N4 C A 272 60.954 106.088 -12.818 1.00142.29 N
ATOM 20 C5 C A 272 60.600 105.046 -10.694 1.00142.29 C
ATOM 21 C6 C A 272 60.672 105.172 -9.362 1.00142.32 C
ATOM 22 P A A 273 60.833 106.425 -2.757 1.00139.14 P
ATOM 23 OP1 A A 273 59.651 105.603 -2.380 1.00139.11 O
ATOM 24 OP2 A A 273 61.015 107.768 -2.145 1.00139.08 O
ATOM 25 O5' A A 273 62.157 105.574 -2.493 1.00136.45 O
TER
ATOM 1 O3' C B 272 60.811 106.593 -4.356 1.00140.67 O
ATOM 2 P A B 273 60.833 106.425 -2.757 1.00139.14 P
ATOM 3 OP1 A B 273 59.651 105.603 -2.380 1.00139.11 O
ATOM 4 OP2 A B 273 61.015 107.768 -2.145 1.00139.08 O
ATOM 5 O5' A B 273 62.157 105.574 -2.493 1.00136.45 O
ATOM 6 C5' A B 273 62.108 104.315 -1.791 1.00131.89 C
ATOM 7 C4' A B 273 63.472 103.971 -1.237 1.00128.70 C
ATOM 8 O4' A B 273 64.384 103.646 -2.320 1.00127.95 O
ATOM 9 C3' A B 273 64.175 105.090 -0.488 1.00126.60 C
ATOM 10 O3' A B 273 63.694 105.218 0.845 1.00123.45 O
ATOM 11 C2' A B 273 65.633 104.657 -0.563 1.00126.53 C
ATOM 12 O2' A B 273 65.957 103.653 0.379 1.00126.18 O
ATOM 13 C1' A B 273 65.697 104.073 -1.979 1.00126.93 C
ATOM 14 N9 A B 273 66.151 105.035 -2.988 1.00126.60 N
ATOM 15 C8 A B 273 65.415 105.620 -3.993 1.00126.12 C
ATOM 16 N7 A B 273 66.102 106.453 -4.736 1.00125.93 N
ATOM 17 C5 A B 273 67.377 106.416 -4.188 1.00125.88 C
ATOM 18 C6 A B 273 68.570 107.084 -4.520 1.00125.69 C
ATOM 19 N6 A B 273 68.676 107.956 -5.526 1.00125.91 N
ATOM 20 N1 A B 273 69.665 106.824 -3.773 1.00125.53 N
ATOM 21 C2 A B 273 69.559 105.952 -2.763 1.00125.52 C
ATOM 22 N3 A B 273 68.496 105.263 -2.352 1.00125.75 N
ATOM 23 C4 A B 273 67.424 105.544 -3.114 1.00126.22 C
ATOM 24 P U B 274 63.317 106.672 1.421 1.00121.40 P
ATOM 25 OP1 U B 274 62.608 106.481 2.712 1.00121.42 O
ATOM 26 OP2 U B 274 62.665 107.449 0.332 1.00121.26 O
ATOM 27 O5' U B 274 64.728 107.343 1.721 1.00119.25 O
TER
Atoms:
C2: (61.507,107.417,-9.590)
OP1: (63.102,101.027,-7.433)
OP2: (62.049,102.618,-9.151)
C4: (61.003,106.160,-11.485)
O5': (62.185,103.240,-6.748)
C3': (60.978,105.446,-5.184)
C1': (61.206,106.463,-7.309)
O4': (62.502,106.058,-6.909)
C5': (62.981,103.969,-5.800)
P: (62.863,102.409,-7.925)
O2: (61.904,108.463,-9.051)
C4': (62.433,105.365,-5.631)
C2': (60.230,105.599,-6.506)
O2': (58.970,106.228,-6.373)
N1: (61.118,106.329,-8.783)
N3: (61.438,107.297,-10.936)
N4: (60.954,106.088,-12.818)
C6: (60.672,105.172,-9.362)
C5: (60.600,105.046,-10.694)
O3': (60.811,106.593,-4.356)
OP1: (63.102,101.027,-7.433)
OP2: (62.049,102.618,-9.151)
C4: (61.003,106.160,-11.485)
O5': (62.185,103.240,-6.748)
C3': (60.978,105.446,-5.184)
C1': (61.206,106.463,-7.309)
O4': (62.502,106.058,-6.909)
C5': (62.981,103.969,-5.800)
P: (62.863,102.409,-7.925)
O2: (61.904,108.463,-9.051)
C4': (62.433,105.365,-5.631)
C2': (60.230,105.599,-6.506)
O2': (58.970,106.228,-6.373)
N1: (61.118,106.329,-8.783)
N3: (61.438,107.297,-10.936)
N4: (60.954,106.088,-12.818)
C6: (60.672,105.172,-9.362)
C5: (60.600,105.046,-10.694)
O3': (60.811,106.593,-4.356)
OP1: (59.651,105.603,-2.380)
OP2: (61.015,107.768,-2.145)
C3': (64.175,105.090,-0.488)
C1': (65.697,104.073,-1.979)
C5': (62.108,104.315,-1.791)
O4': (64.384,103.646,-2.320)
C8: (65.415,105.620,-3.993)
O2': (65.957,103.653,0.379)
C6: (68.570,107.084,-4.520)
C5: (67.377,106.416,-4.188)
C4: (67.424,105.544,-3.114)
P: (60.833,106.425,-2.757)
C4': (63.472,103.971,-1.237)
C2': (65.633,104.657,-0.563)
C2: (69.559,105.952,-2.763)
N1: (69.665,106.824,-3.773)
N3: (68.496,105.263,-2.352)
N6: (68.676,107.956,-5.526)
N7: (66.102,106.453,-4.736)
N9: (66.151,105.035,-2.988)
O5': (62.157,105.574,-2.493)
O3': (63.694,105.218,0.845)
OP2: (61.015,107.768,-2.145)
C3': (64.175,105.090,-0.488)
C1': (65.697,104.073,-1.979)
C5': (62.108,104.315,-1.791)
O4': (64.384,103.646,-2.320)
C8: (65.415,105.620,-3.993)
O2': (65.957,103.653,0.379)
C6: (68.570,107.084,-4.520)
C5: (67.377,106.416,-4.188)
C4: (67.424,105.544,-3.114)
P: (60.833,106.425,-2.757)
C4': (63.472,103.971,-1.237)
C2': (65.633,104.657,-0.563)
C2: (69.559,105.952,-2.763)
N1: (69.665,106.824,-3.773)
N3: (68.496,105.263,-2.352)
N6: (68.676,107.956,-5.526)
N7: (66.102,106.453,-4.736)
N9: (66.151,105.035,-2.988)
O5': (62.157,105.574,-2.493)
O3': (63.694,105.218,0.845)
Image (generated by PyMOL):