Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQN:0272:0273
Extra
PDB:
ATOM 1 O3' U A 271 64.490 103.338 -8.166 1.00145.76 O
ATOM 2 P C A 272 63.020 102.697 -8.002 1.00145.21 P
ATOM 3 OP1 C A 272 63.217 101.251 -7.714 1.00145.15 O
ATOM 4 OP2 C A 272 62.173 103.105 -9.153 1.00145.02 O
ATOM 5 O5' C A 272 62.433 103.388 -6.690 1.00143.99 O
ATOM 6 C5' C A 272 63.268 104.197 -5.841 1.00142.30 C
ATOM 7 C4' C A 272 62.690 105.587 -5.711 1.00141.10 C
ATOM 8 O4' C A 272 62.670 106.230 -7.018 1.00141.14 O
ATOM 9 C3' C A 272 61.262 105.660 -5.185 1.00140.26 C
ATOM 10 O3' C A 272 61.122 106.849 -4.416 1.00138.41 O
ATOM 11 C2' C A 272 60.441 105.746 -6.468 1.00140.56 C
ATOM 12 O2' C A 272 59.171 106.342 -6.285 1.00140.92 O
ATOM 13 C1' C A 272 61.347 106.616 -7.342 1.00140.63 C
ATOM 14 N1 C A 272 61.169 106.489 -8.808 1.00140.47 N
ATOM 15 C2 C A 272 61.745 107.462 -9.646 1.00140.41 C
ATOM 16 O2 C A 272 62.373 108.405 -9.139 1.00140.54 O
ATOM 17 N3 C A 272 61.599 107.351 -10.986 1.00140.38 N
ATOM 18 C4 C A 272 60.910 106.329 -11.501 1.00140.36 C
ATOM 19 N4 C A 272 60.793 106.262 -12.830 1.00140.09 N
ATOM 20 C5 C A 272 60.311 105.331 -10.678 1.00140.25 C
ATOM 21 C6 C A 272 60.463 105.448 -9.352 1.00140.29 C
ATOM 22 P A A 273 61.220 106.774 -2.815 1.00136.80 P
ATOM 23 OP1 A A 273 60.001 106.073 -2.325 1.00136.69 O
ATOM 24 OP2 A A 273 61.534 108.136 -2.310 1.00136.86 O
ATOM 25 O5' A A 273 62.490 105.843 -2.561 1.00133.82 O
TER
ATOM 1 O3' C B 272 61.122 106.849 -4.416 1.00138.41 O
ATOM 2 P A B 273 61.220 106.774 -2.815 1.00136.80 P
ATOM 3 OP1 A B 273 60.001 106.073 -2.325 1.00136.69 O
ATOM 4 OP2 A B 273 61.534 108.136 -2.310 1.00136.86 O
ATOM 5 O5' A B 273 62.490 105.843 -2.561 1.00133.82 O
ATOM 6 C5' A B 273 62.379 104.621 -1.804 1.00128.82 C
ATOM 7 C4' A B 273 63.718 104.252 -1.209 1.00125.15 C
ATOM 8 O4' A B 273 64.641 103.884 -2.268 1.00124.38 O
ATOM 9 C3' A B 273 64.430 105.371 -0.466 1.00122.77 C
ATOM 10 O3' A B 273 63.927 105.531 0.857 1.00119.21 O
ATOM 11 C2' A B 273 65.880 104.908 -0.512 1.00122.81 C
ATOM 12 O2' A B 273 66.176 103.914 0.449 1.00122.74 O
ATOM 13 C1' A B 273 65.955 104.297 -1.917 1.00123.17 C
ATOM 14 N9 A B 273 66.434 105.234 -2.938 1.00122.58 N
ATOM 15 C8 A B 273 65.719 105.821 -3.956 1.00122.02 C
ATOM 16 N7 A B 273 66.429 106.633 -4.702 1.00121.69 N
ATOM 17 C5 A B 273 67.699 106.577 -4.143 1.00121.63 C
ATOM 18 C6 A B 273 68.909 107.218 -4.472 1.00121.37 C
ATOM 19 N6 A B 273 69.043 108.076 -5.485 1.00121.22 N
ATOM 20 N1 A B 273 69.991 106.944 -3.711 1.00121.30 N
ATOM 21 C2 A B 273 69.858 106.084 -2.693 1.00121.33 C
ATOM 22 N3 A B 273 68.778 105.420 -2.285 1.00121.34 N
ATOM 23 C4 A B 273 67.719 105.714 -3.060 1.00121.95 C
ATOM 24 P U B 274 63.530 106.999 1.391 1.00116.70 P
ATOM 25 OP1 U B 274 62.723 106.837 2.627 1.00116.60 O
ATOM 26 OP2 U B 274 62.978 107.779 0.251 1.00116.63 O
ATOM 27 O5' U B 274 64.921 107.656 1.792 1.00114.29 O
TER
ATOM 2 P C A 272 63.020 102.697 -8.002 1.00145.21 P
ATOM 3 OP1 C A 272 63.217 101.251 -7.714 1.00145.15 O
ATOM 4 OP2 C A 272 62.173 103.105 -9.153 1.00145.02 O
ATOM 5 O5' C A 272 62.433 103.388 -6.690 1.00143.99 O
ATOM 6 C5' C A 272 63.268 104.197 -5.841 1.00142.30 C
ATOM 7 C4' C A 272 62.690 105.587 -5.711 1.00141.10 C
ATOM 8 O4' C A 272 62.670 106.230 -7.018 1.00141.14 O
ATOM 9 C3' C A 272 61.262 105.660 -5.185 1.00140.26 C
ATOM 10 O3' C A 272 61.122 106.849 -4.416 1.00138.41 O
ATOM 11 C2' C A 272 60.441 105.746 -6.468 1.00140.56 C
ATOM 12 O2' C A 272 59.171 106.342 -6.285 1.00140.92 O
ATOM 13 C1' C A 272 61.347 106.616 -7.342 1.00140.63 C
ATOM 14 N1 C A 272 61.169 106.489 -8.808 1.00140.47 N
ATOM 15 C2 C A 272 61.745 107.462 -9.646 1.00140.41 C
ATOM 16 O2 C A 272 62.373 108.405 -9.139 1.00140.54 O
ATOM 17 N3 C A 272 61.599 107.351 -10.986 1.00140.38 N
ATOM 18 C4 C A 272 60.910 106.329 -11.501 1.00140.36 C
ATOM 19 N4 C A 272 60.793 106.262 -12.830 1.00140.09 N
ATOM 20 C5 C A 272 60.311 105.331 -10.678 1.00140.25 C
ATOM 21 C6 C A 272 60.463 105.448 -9.352 1.00140.29 C
ATOM 22 P A A 273 61.220 106.774 -2.815 1.00136.80 P
ATOM 23 OP1 A A 273 60.001 106.073 -2.325 1.00136.69 O
ATOM 24 OP2 A A 273 61.534 108.136 -2.310 1.00136.86 O
ATOM 25 O5' A A 273 62.490 105.843 -2.561 1.00133.82 O
TER
ATOM 1 O3' C B 272 61.122 106.849 -4.416 1.00138.41 O
ATOM 2 P A B 273 61.220 106.774 -2.815 1.00136.80 P
ATOM 3 OP1 A B 273 60.001 106.073 -2.325 1.00136.69 O
ATOM 4 OP2 A B 273 61.534 108.136 -2.310 1.00136.86 O
ATOM 5 O5' A B 273 62.490 105.843 -2.561 1.00133.82 O
ATOM 6 C5' A B 273 62.379 104.621 -1.804 1.00128.82 C
ATOM 7 C4' A B 273 63.718 104.252 -1.209 1.00125.15 C
ATOM 8 O4' A B 273 64.641 103.884 -2.268 1.00124.38 O
ATOM 9 C3' A B 273 64.430 105.371 -0.466 1.00122.77 C
ATOM 10 O3' A B 273 63.927 105.531 0.857 1.00119.21 O
ATOM 11 C2' A B 273 65.880 104.908 -0.512 1.00122.81 C
ATOM 12 O2' A B 273 66.176 103.914 0.449 1.00122.74 O
ATOM 13 C1' A B 273 65.955 104.297 -1.917 1.00123.17 C
ATOM 14 N9 A B 273 66.434 105.234 -2.938 1.00122.58 N
ATOM 15 C8 A B 273 65.719 105.821 -3.956 1.00122.02 C
ATOM 16 N7 A B 273 66.429 106.633 -4.702 1.00121.69 N
ATOM 17 C5 A B 273 67.699 106.577 -4.143 1.00121.63 C
ATOM 18 C6 A B 273 68.909 107.218 -4.472 1.00121.37 C
ATOM 19 N6 A B 273 69.043 108.076 -5.485 1.00121.22 N
ATOM 20 N1 A B 273 69.991 106.944 -3.711 1.00121.30 N
ATOM 21 C2 A B 273 69.858 106.084 -2.693 1.00121.33 C
ATOM 22 N3 A B 273 68.778 105.420 -2.285 1.00121.34 N
ATOM 23 C4 A B 273 67.719 105.714 -3.060 1.00121.95 C
ATOM 24 P U B 274 63.530 106.999 1.391 1.00116.70 P
ATOM 25 OP1 U B 274 62.723 106.837 2.627 1.00116.60 O
ATOM 26 OP2 U B 274 62.978 107.779 0.251 1.00116.63 O
ATOM 27 O5' U B 274 64.921 107.656 1.792 1.00114.29 O
TER
Atoms:
C2: (61.745,107.462,-9.646)
OP1: (63.217,101.251,-7.714)
OP2: (62.173,103.105,-9.153)
C4: (60.910,106.329,-11.501)
O5': (62.433,103.388,-6.690)
C3': (61.262,105.660,-5.185)
C1': (61.347,106.616,-7.342)
O4': (62.670,106.230,-7.018)
C5': (63.268,104.197,-5.841)
P: (63.020,102.697,-8.002)
O2: (62.373,108.405,-9.139)
C4': (62.690,105.587,-5.711)
C2': (60.441,105.746,-6.468)
O2': (59.171,106.342,-6.285)
N1: (61.169,106.489,-8.808)
N3: (61.599,107.351,-10.986)
N4: (60.793,106.262,-12.830)
C6: (60.463,105.448,-9.352)
C5: (60.311,105.331,-10.678)
O3': (61.122,106.849,-4.416)
OP1: (63.217,101.251,-7.714)
OP2: (62.173,103.105,-9.153)
C4: (60.910,106.329,-11.501)
O5': (62.433,103.388,-6.690)
C3': (61.262,105.660,-5.185)
C1': (61.347,106.616,-7.342)
O4': (62.670,106.230,-7.018)
C5': (63.268,104.197,-5.841)
P: (63.020,102.697,-8.002)
O2: (62.373,108.405,-9.139)
C4': (62.690,105.587,-5.711)
C2': (60.441,105.746,-6.468)
O2': (59.171,106.342,-6.285)
N1: (61.169,106.489,-8.808)
N3: (61.599,107.351,-10.986)
N4: (60.793,106.262,-12.830)
C6: (60.463,105.448,-9.352)
C5: (60.311,105.331,-10.678)
O3': (61.122,106.849,-4.416)
OP1: (60.001,106.073,-2.325)
OP2: (61.534,108.136,-2.310)
C3': (64.430,105.371,-0.466)
C1': (65.955,104.297,-1.917)
C5': (62.379,104.621,-1.804)
O4': (64.641,103.884,-2.268)
C8: (65.719,105.821,-3.956)
O2': (66.176,103.914,0.449)
C6: (68.909,107.218,-4.472)
C5: (67.699,106.577,-4.143)
C4: (67.719,105.714,-3.060)
P: (61.220,106.774,-2.815)
C4': (63.718,104.252,-1.209)
C2': (65.880,104.908,-0.512)
C2: (69.858,106.084,-2.693)
N1: (69.991,106.944,-3.711)
N3: (68.778,105.420,-2.285)
N6: (69.043,108.076,-5.485)
N7: (66.429,106.633,-4.702)
N9: (66.434,105.234,-2.938)
O5': (62.490,105.843,-2.561)
O3': (63.927,105.531,0.857)
OP2: (61.534,108.136,-2.310)
C3': (64.430,105.371,-0.466)
C1': (65.955,104.297,-1.917)
C5': (62.379,104.621,-1.804)
O4': (64.641,103.884,-2.268)
C8: (65.719,105.821,-3.956)
O2': (66.176,103.914,0.449)
C6: (68.909,107.218,-4.472)
C5: (67.699,106.577,-4.143)
C4: (67.719,105.714,-3.060)
P: (61.220,106.774,-2.815)
C4': (63.718,104.252,-1.209)
C2': (65.880,104.908,-0.512)
C2: (69.858,106.084,-2.693)
N1: (69.991,106.944,-3.711)
N3: (68.778,105.420,-2.285)
N6: (69.043,108.076,-5.485)
N7: (66.429,106.633,-4.702)
N9: (66.434,105.234,-2.938)
O5': (62.490,105.843,-2.561)
O3': (63.927,105.531,0.857)
Image (generated by PyMOL):