Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQO:0272:0273
Extra
PDB:
ATOM 1 O3' U A 271 64.486 103.479 -8.028 1.00140.41 O
ATOM 2 P C A 272 63.024 102.832 -7.831 1.00139.85 P
ATOM 3 OP1 C A 272 63.233 101.457 -7.307 1.00140.15 O
ATOM 4 OP2 C A 272 62.224 103.031 -9.068 1.00139.93 O
ATOM 5 O5' C A 272 62.359 103.704 -6.677 1.00138.47 O
ATOM 6 C5' C A 272 63.172 104.417 -5.734 1.00136.66 C
ATOM 7 C4' C A 272 62.708 105.849 -5.629 1.00135.44 C
ATOM 8 O4' C A 272 62.804 106.479 -6.939 1.00135.28 O
ATOM 9 C3' C A 272 61.267 106.045 -5.170 1.00134.54 C
ATOM 10 O3' C A 272 61.195 107.232 -4.389 1.00132.90 O
ATOM 11 C2' C A 272 60.515 106.210 -6.487 1.00134.67 C
ATOM 12 O2' C A 272 59.308 106.935 -6.357 1.00134.89 O
ATOM 13 C1' C A 272 61.538 106.979 -7.324 1.00134.69 C
ATOM 14 N1 C A 272 61.406 106.828 -8.790 1.00134.33 N
ATOM 15 C2 C A 272 61.751 107.912 -9.617 1.00134.21 C
ATOM 16 O2 C A 272 62.159 108.966 -9.101 1.00134.19 O
ATOM 17 N3 C A 272 61.631 107.781 -10.958 1.00134.22 N
ATOM 18 C4 C A 272 61.189 106.636 -11.481 1.00134.25 C
ATOM 19 N4 C A 272 61.083 106.555 -12.810 1.00134.22 N
ATOM 20 C5 C A 272 60.834 105.522 -10.667 1.00134.10 C
ATOM 21 C6 C A 272 60.957 105.659 -9.342 1.00134.07 C
ATOM 22 P A A 273 61.295 107.132 -2.789 1.00131.54 P
ATOM 23 OP1 A A 273 60.044 106.488 -2.301 1.00131.63 O
ATOM 24 OP2 A A 273 61.685 108.467 -2.264 1.00131.51 O
ATOM 25 O5' A A 273 62.516 106.134 -2.556 1.00128.89 O
TER
ATOM 1 O3' C B 272 61.195 107.232 -4.389 1.00132.90 O
ATOM 2 P A B 273 61.295 107.132 -2.789 1.00131.54 P
ATOM 3 OP1 A B 273 60.044 106.488 -2.301 1.00131.63 O
ATOM 4 OP2 A B 273 61.685 108.467 -2.264 1.00131.51 O
ATOM 5 O5' A B 273 62.516 106.134 -2.556 1.00128.89 O
ATOM 6 C5' A B 273 62.336 104.879 -1.869 1.00124.23 C
ATOM 7 C4' A B 273 63.635 104.449 -1.230 1.00120.95 C
ATOM 8 O4' A B 273 64.596 104.082 -2.256 1.00120.13 O
ATOM 9 C3' A B 273 64.338 105.535 -0.436 1.00118.83 C
ATOM 10 O3' A B 273 63.781 105.678 0.865 1.00116.14 O
ATOM 11 C2' A B 273 65.782 105.055 -0.440 1.00118.55 C
ATOM 12 O2' A B 273 66.021 104.024 0.497 1.00118.57 O
ATOM 13 C1' A B 273 65.899 104.483 -1.857 1.00118.74 C
ATOM 14 N9 A B 273 66.404 105.446 -2.841 1.00117.99 N
ATOM 15 C8 A B 273 65.710 106.045 -3.867 1.00117.45 C
ATOM 16 N7 A B 273 66.432 106.868 -4.586 1.00117.11 N
ATOM 17 C5 A B 273 67.688 106.811 -3.999 1.00116.94 C
ATOM 18 C6 A B 273 68.901 107.459 -4.295 1.00116.60 C
ATOM 19 N6 A B 273 69.054 108.324 -5.300 1.00116.35 N
ATOM 20 N1 A B 273 69.967 107.183 -3.513 1.00116.52 N
ATOM 21 C2 A B 273 69.815 106.313 -2.506 1.00116.66 C
ATOM 22 N3 A B 273 68.729 105.640 -2.128 1.00116.73 N
ATOM 23 C4 A B 273 67.687 105.938 -2.924 1.00117.33 C
ATOM 24 P U B 274 63.476 107.148 1.440 1.00114.56 P
ATOM 25 OP1 U B 274 62.800 107.010 2.758 1.00114.42 O
ATOM 26 OP2 U B 274 62.823 107.934 0.359 1.00114.51 O
ATOM 27 O5' U B 274 64.923 107.761 1.688 1.00112.54 O
TER
ATOM 2 P C A 272 63.024 102.832 -7.831 1.00139.85 P
ATOM 3 OP1 C A 272 63.233 101.457 -7.307 1.00140.15 O
ATOM 4 OP2 C A 272 62.224 103.031 -9.068 1.00139.93 O
ATOM 5 O5' C A 272 62.359 103.704 -6.677 1.00138.47 O
ATOM 6 C5' C A 272 63.172 104.417 -5.734 1.00136.66 C
ATOM 7 C4' C A 272 62.708 105.849 -5.629 1.00135.44 C
ATOM 8 O4' C A 272 62.804 106.479 -6.939 1.00135.28 O
ATOM 9 C3' C A 272 61.267 106.045 -5.170 1.00134.54 C
ATOM 10 O3' C A 272 61.195 107.232 -4.389 1.00132.90 O
ATOM 11 C2' C A 272 60.515 106.210 -6.487 1.00134.67 C
ATOM 12 O2' C A 272 59.308 106.935 -6.357 1.00134.89 O
ATOM 13 C1' C A 272 61.538 106.979 -7.324 1.00134.69 C
ATOM 14 N1 C A 272 61.406 106.828 -8.790 1.00134.33 N
ATOM 15 C2 C A 272 61.751 107.912 -9.617 1.00134.21 C
ATOM 16 O2 C A 272 62.159 108.966 -9.101 1.00134.19 O
ATOM 17 N3 C A 272 61.631 107.781 -10.958 1.00134.22 N
ATOM 18 C4 C A 272 61.189 106.636 -11.481 1.00134.25 C
ATOM 19 N4 C A 272 61.083 106.555 -12.810 1.00134.22 N
ATOM 20 C5 C A 272 60.834 105.522 -10.667 1.00134.10 C
ATOM 21 C6 C A 272 60.957 105.659 -9.342 1.00134.07 C
ATOM 22 P A A 273 61.295 107.132 -2.789 1.00131.54 P
ATOM 23 OP1 A A 273 60.044 106.488 -2.301 1.00131.63 O
ATOM 24 OP2 A A 273 61.685 108.467 -2.264 1.00131.51 O
ATOM 25 O5' A A 273 62.516 106.134 -2.556 1.00128.89 O
TER
ATOM 1 O3' C B 272 61.195 107.232 -4.389 1.00132.90 O
ATOM 2 P A B 273 61.295 107.132 -2.789 1.00131.54 P
ATOM 3 OP1 A B 273 60.044 106.488 -2.301 1.00131.63 O
ATOM 4 OP2 A B 273 61.685 108.467 -2.264 1.00131.51 O
ATOM 5 O5' A B 273 62.516 106.134 -2.556 1.00128.89 O
ATOM 6 C5' A B 273 62.336 104.879 -1.869 1.00124.23 C
ATOM 7 C4' A B 273 63.635 104.449 -1.230 1.00120.95 C
ATOM 8 O4' A B 273 64.596 104.082 -2.256 1.00120.13 O
ATOM 9 C3' A B 273 64.338 105.535 -0.436 1.00118.83 C
ATOM 10 O3' A B 273 63.781 105.678 0.865 1.00116.14 O
ATOM 11 C2' A B 273 65.782 105.055 -0.440 1.00118.55 C
ATOM 12 O2' A B 273 66.021 104.024 0.497 1.00118.57 O
ATOM 13 C1' A B 273 65.899 104.483 -1.857 1.00118.74 C
ATOM 14 N9 A B 273 66.404 105.446 -2.841 1.00117.99 N
ATOM 15 C8 A B 273 65.710 106.045 -3.867 1.00117.45 C
ATOM 16 N7 A B 273 66.432 106.868 -4.586 1.00117.11 N
ATOM 17 C5 A B 273 67.688 106.811 -3.999 1.00116.94 C
ATOM 18 C6 A B 273 68.901 107.459 -4.295 1.00116.60 C
ATOM 19 N6 A B 273 69.054 108.324 -5.300 1.00116.35 N
ATOM 20 N1 A B 273 69.967 107.183 -3.513 1.00116.52 N
ATOM 21 C2 A B 273 69.815 106.313 -2.506 1.00116.66 C
ATOM 22 N3 A B 273 68.729 105.640 -2.128 1.00116.73 N
ATOM 23 C4 A B 273 67.687 105.938 -2.924 1.00117.33 C
ATOM 24 P U B 274 63.476 107.148 1.440 1.00114.56 P
ATOM 25 OP1 U B 274 62.800 107.010 2.758 1.00114.42 O
ATOM 26 OP2 U B 274 62.823 107.934 0.359 1.00114.51 O
ATOM 27 O5' U B 274 64.923 107.761 1.688 1.00112.54 O
TER
Atoms:
C2: (61.751,107.912,-9.617)
OP1: (63.233,101.457,-7.307)
OP2: (62.224,103.031,-9.068)
C4: (61.189,106.636,-11.481)
O5': (62.359,103.704,-6.677)
C3': (61.267,106.045,-5.170)
C1': (61.538,106.979,-7.324)
O4': (62.804,106.479,-6.939)
C5': (63.172,104.417,-5.734)
P: (63.024,102.832,-7.831)
O2: (62.159,108.966,-9.101)
C4': (62.708,105.849,-5.629)
C2': (60.515,106.210,-6.487)
O2': (59.308,106.935,-6.357)
N1: (61.406,106.828,-8.790)
N3: (61.631,107.781,-10.958)
N4: (61.083,106.555,-12.810)
C6: (60.957,105.659,-9.342)
C5: (60.834,105.522,-10.667)
O3': (61.195,107.232,-4.389)
OP1: (63.233,101.457,-7.307)
OP2: (62.224,103.031,-9.068)
C4: (61.189,106.636,-11.481)
O5': (62.359,103.704,-6.677)
C3': (61.267,106.045,-5.170)
C1': (61.538,106.979,-7.324)
O4': (62.804,106.479,-6.939)
C5': (63.172,104.417,-5.734)
P: (63.024,102.832,-7.831)
O2: (62.159,108.966,-9.101)
C4': (62.708,105.849,-5.629)
C2': (60.515,106.210,-6.487)
O2': (59.308,106.935,-6.357)
N1: (61.406,106.828,-8.790)
N3: (61.631,107.781,-10.958)
N4: (61.083,106.555,-12.810)
C6: (60.957,105.659,-9.342)
C5: (60.834,105.522,-10.667)
O3': (61.195,107.232,-4.389)
OP1: (60.044,106.488,-2.301)
OP2: (61.685,108.467,-2.264)
C3': (64.338,105.535,-0.436)
C1': (65.899,104.483,-1.857)
C5': (62.336,104.879,-1.869)
O4': (64.596,104.082,-2.256)
C8: (65.710,106.045,-3.867)
O2': (66.021,104.024,0.497)
C6: (68.901,107.459,-4.295)
C5: (67.688,106.811,-3.999)
C4: (67.687,105.938,-2.924)
P: (61.295,107.132,-2.789)
C4': (63.635,104.449,-1.230)
C2': (65.782,105.055,-0.440)
C2: (69.815,106.313,-2.506)
N1: (69.967,107.183,-3.513)
N3: (68.729,105.640,-2.128)
N6: (69.054,108.324,-5.300)
N7: (66.432,106.868,-4.586)
N9: (66.404,105.446,-2.841)
O5': (62.516,106.134,-2.556)
O3': (63.781,105.678,0.865)
OP2: (61.685,108.467,-2.264)
C3': (64.338,105.535,-0.436)
C1': (65.899,104.483,-1.857)
C5': (62.336,104.879,-1.869)
O4': (64.596,104.082,-2.256)
C8: (65.710,106.045,-3.867)
O2': (66.021,104.024,0.497)
C6: (68.901,107.459,-4.295)
C5: (67.688,106.811,-3.999)
C4: (67.687,105.938,-2.924)
P: (61.295,107.132,-2.789)
C4': (63.635,104.449,-1.230)
C2': (65.782,105.055,-0.440)
C2: (69.815,106.313,-2.506)
N1: (69.967,107.183,-3.513)
N3: (68.729,105.640,-2.128)
N6: (69.054,108.324,-5.300)
N7: (66.432,106.868,-4.586)
N9: (66.404,105.446,-2.841)
O5': (62.516,106.134,-2.556)
O3': (63.781,105.678,0.865)
Image (generated by PyMOL):