Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQN:01087:01086
Extra
PDB:
ATOM 1 O3' C A1086 49.629 100.793 115.066 1.00 50.91 O
ATOM 2 P U A1087 48.446 100.410 116.089 1.00 50.85 P
ATOM 3 OP1 U A1087 49.050 100.384 117.443 1.00 51.43 O
ATOM 4 OP2 U A1087 47.729 99.210 115.587 1.00 47.73 O
ATOM 5 O5' U A1087 47.441 101.640 116.012 1.00 50.82 O
ATOM 6 C5' U A1087 47.857 102.957 116.388 1.00 49.76 C
ATOM 7 C4' U A1087 46.715 103.931 116.226 1.00 52.09 C
ATOM 8 O4' U A1087 46.424 104.122 114.810 1.00 52.56 O
ATOM 9 C3' U A1087 45.394 103.532 116.877 1.00 52.56 C
ATOM 10 O3' U A1087 44.785 104.696 117.416 1.00 53.35 O
ATOM 11 C2' U A1087 44.584 103.004 115.696 1.00 51.93 C
ATOM 12 O2' U A1087 43.186 103.091 115.882 1.00 51.94 O
ATOM 13 C1' U A1087 45.042 103.945 114.588 1.00 50.16 C
ATOM 14 N1 U A1087 44.838 103.461 113.215 1.00 48.27 N
ATOM 15 C2 U A1087 44.116 104.274 112.351 1.00 46.42 C
ATOM 16 O2 U A1087 43.651 105.349 112.678 1.00 44.95 O
ATOM 17 N3 U A1087 43.955 103.779 111.087 1.00 46.13 N
ATOM 18 C4 U A1087 44.410 102.581 110.600 1.00 48.94 C
ATOM 19 O4 U A1087 44.163 102.276 109.429 1.00 51.62 O
ATOM 20 C5 U A1087 45.149 101.791 111.545 1.00 49.59 C
ATOM 21 C6 U A1087 45.337 102.250 112.789 1.00 49.45 C
ATOM 22 P C A1088 44.839 104.947 119.000 1.00 55.81 P
ATOM 23 OP1 C A1088 44.225 106.281 119.288 1.00 55.68 O
ATOM 24 OP2 C A1088 46.234 104.671 119.445 1.00 55.42 O
ATOM 25 O5' C A1088 43.903 103.800 119.591 1.00 54.85 O
TER
ATOM 1 O3' C B1085 45.660 98.362 111.667 1.00 53.10 O
ATOM 2 P C B1086 47.141 98.456 111.047 1.00 54.76 P
ATOM 3 OP1 C B1086 47.055 99.305 109.831 1.00 57.27 O
ATOM 4 OP2 C B1086 47.698 97.079 110.945 1.00 53.57 O
ATOM 5 O5' C B1086 47.962 99.261 112.149 1.00 52.48 O
ATOM 6 C5' C B1086 49.350 98.987 112.400 1.00 49.81 C
ATOM 7 C4' C B1086 50.069 100.268 112.737 1.00 50.11 C
ATOM 8 O4' C B1086 50.220 101.065 111.537 1.00 49.32 O
ATOM 9 C3' C B1086 49.330 101.166 113.718 1.00 50.87 C
ATOM 10 O3' C B1086 49.629 100.793 115.066 1.00 50.91 O
ATOM 11 C2' C B1086 49.871 102.550 113.374 1.00 50.85 C
ATOM 12 O2' C B1086 51.114 102.834 113.981 1.00 54.82 O
ATOM 13 C1' C B1086 50.078 102.439 111.858 1.00 49.61 C
ATOM 14 N1 C B1086 48.996 103.013 111.033 1.00 48.71 N
ATOM 15 C2 C B1086 48.636 104.358 111.218 1.00 48.55 C
ATOM 16 O2 C B1086 49.250 105.041 112.056 1.00 50.80 O
ATOM 17 N3 C B1086 47.639 104.882 110.469 1.00 46.81 N
ATOM 18 C4 C B1086 47.028 104.133 109.555 1.00 45.19 C
ATOM 19 N4 C B1086 46.065 104.700 108.828 1.00 45.65 N
ATOM 20 C5 C B1086 47.377 102.769 109.341 1.00 46.34 C
ATOM 21 C6 C B1086 48.350 102.252 110.097 1.00 46.81 C
ATOM 22 P U B1087 48.446 100.410 116.089 1.00 50.85 P
ATOM 23 OP1 U B1087 49.050 100.384 117.443 1.00 51.43 O
ATOM 24 OP2 U B1087 47.729 99.210 115.587 1.00 47.73 O
ATOM 25 O5' U B1087 47.441 101.640 116.012 1.00 50.82 O
TER
ATOM 2 P U A1087 48.446 100.410 116.089 1.00 50.85 P
ATOM 3 OP1 U A1087 49.050 100.384 117.443 1.00 51.43 O
ATOM 4 OP2 U A1087 47.729 99.210 115.587 1.00 47.73 O
ATOM 5 O5' U A1087 47.441 101.640 116.012 1.00 50.82 O
ATOM 6 C5' U A1087 47.857 102.957 116.388 1.00 49.76 C
ATOM 7 C4' U A1087 46.715 103.931 116.226 1.00 52.09 C
ATOM 8 O4' U A1087 46.424 104.122 114.810 1.00 52.56 O
ATOM 9 C3' U A1087 45.394 103.532 116.877 1.00 52.56 C
ATOM 10 O3' U A1087 44.785 104.696 117.416 1.00 53.35 O
ATOM 11 C2' U A1087 44.584 103.004 115.696 1.00 51.93 C
ATOM 12 O2' U A1087 43.186 103.091 115.882 1.00 51.94 O
ATOM 13 C1' U A1087 45.042 103.945 114.588 1.00 50.16 C
ATOM 14 N1 U A1087 44.838 103.461 113.215 1.00 48.27 N
ATOM 15 C2 U A1087 44.116 104.274 112.351 1.00 46.42 C
ATOM 16 O2 U A1087 43.651 105.349 112.678 1.00 44.95 O
ATOM 17 N3 U A1087 43.955 103.779 111.087 1.00 46.13 N
ATOM 18 C4 U A1087 44.410 102.581 110.600 1.00 48.94 C
ATOM 19 O4 U A1087 44.163 102.276 109.429 1.00 51.62 O
ATOM 20 C5 U A1087 45.149 101.791 111.545 1.00 49.59 C
ATOM 21 C6 U A1087 45.337 102.250 112.789 1.00 49.45 C
ATOM 22 P C A1088 44.839 104.947 119.000 1.00 55.81 P
ATOM 23 OP1 C A1088 44.225 106.281 119.288 1.00 55.68 O
ATOM 24 OP2 C A1088 46.234 104.671 119.445 1.00 55.42 O
ATOM 25 O5' C A1088 43.903 103.800 119.591 1.00 54.85 O
TER
ATOM 1 O3' C B1085 45.660 98.362 111.667 1.00 53.10 O
ATOM 2 P C B1086 47.141 98.456 111.047 1.00 54.76 P
ATOM 3 OP1 C B1086 47.055 99.305 109.831 1.00 57.27 O
ATOM 4 OP2 C B1086 47.698 97.079 110.945 1.00 53.57 O
ATOM 5 O5' C B1086 47.962 99.261 112.149 1.00 52.48 O
ATOM 6 C5' C B1086 49.350 98.987 112.400 1.00 49.81 C
ATOM 7 C4' C B1086 50.069 100.268 112.737 1.00 50.11 C
ATOM 8 O4' C B1086 50.220 101.065 111.537 1.00 49.32 O
ATOM 9 C3' C B1086 49.330 101.166 113.718 1.00 50.87 C
ATOM 10 O3' C B1086 49.629 100.793 115.066 1.00 50.91 O
ATOM 11 C2' C B1086 49.871 102.550 113.374 1.00 50.85 C
ATOM 12 O2' C B1086 51.114 102.834 113.981 1.00 54.82 O
ATOM 13 C1' C B1086 50.078 102.439 111.858 1.00 49.61 C
ATOM 14 N1 C B1086 48.996 103.013 111.033 1.00 48.71 N
ATOM 15 C2 C B1086 48.636 104.358 111.218 1.00 48.55 C
ATOM 16 O2 C B1086 49.250 105.041 112.056 1.00 50.80 O
ATOM 17 N3 C B1086 47.639 104.882 110.469 1.00 46.81 N
ATOM 18 C4 C B1086 47.028 104.133 109.555 1.00 45.19 C
ATOM 19 N4 C B1086 46.065 104.700 108.828 1.00 45.65 N
ATOM 20 C5 C B1086 47.377 102.769 109.341 1.00 46.34 C
ATOM 21 C6 C B1086 48.350 102.252 110.097 1.00 46.81 C
ATOM 22 P U B1087 48.446 100.410 116.089 1.00 50.85 P
ATOM 23 OP1 U B1087 49.050 100.384 117.443 1.00 51.43 O
ATOM 24 OP2 U B1087 47.729 99.210 115.587 1.00 47.73 O
ATOM 25 O5' U B1087 47.441 101.640 116.012 1.00 50.82 O
TER
Atoms:
C4: (44.410,102.581,110.600)
N3: (43.955,103.779,111.087)
OP1: (49.050,100.384,117.443)
OP2: (47.729,99.210,115.587)
C2: (44.116,104.274,112.351)
C1': (45.042,103.945,114.588)
C3': (45.394,103.532,116.877)
O5': (47.441,101.640,116.012)
O4': (46.424,104.122,114.810)
C5': (47.857,102.957,116.388)
P: (48.446,100.410,116.089)
C4': (46.715,103.931,116.226)
C2': (44.584,103.004,115.696)
O2': (43.186,103.091,115.882)
N1: (44.838,103.461,113.215)
O4: (44.163,102.276,109.429)
O2: (43.651,105.349,112.678)
C6: (45.337,102.250,112.789)
C5: (45.149,101.791,111.545)
O3': (44.785,104.696,117.416)
N3: (43.955,103.779,111.087)
OP1: (49.050,100.384,117.443)
OP2: (47.729,99.210,115.587)
C2: (44.116,104.274,112.351)
C1': (45.042,103.945,114.588)
C3': (45.394,103.532,116.877)
O5': (47.441,101.640,116.012)
O4': (46.424,104.122,114.810)
C5': (47.857,102.957,116.388)
P: (48.446,100.410,116.089)
C4': (46.715,103.931,116.226)
C2': (44.584,103.004,115.696)
O2': (43.186,103.091,115.882)
N1: (44.838,103.461,113.215)
O4: (44.163,102.276,109.429)
O2: (43.651,105.349,112.678)
C6: (45.337,102.250,112.789)
C5: (45.149,101.791,111.545)
O3': (44.785,104.696,117.416)
C2: (48.636,104.358,111.218)
OP1: (47.055,99.305,109.831)
OP2: (47.698,97.079,110.945)
C4: (47.028,104.133,109.555)
O5': (47.962,99.261,112.149)
C3': (49.330,101.166,113.718)
C1': (50.078,102.439,111.858)
O4': (50.220,101.065,111.537)
C5': (49.350,98.987,112.400)
P: (47.141,98.456,111.047)
O2: (49.250,105.041,112.056)
C4': (50.069,100.268,112.737)
C2': (49.871,102.550,113.374)
O2': (51.114,102.834,113.981)
N1: (48.996,103.013,111.033)
N3: (47.639,104.882,110.469)
N4: (46.065,104.700,108.828)
C6: (48.350,102.252,110.097)
C5: (47.377,102.769,109.341)
O3': (49.629,100.793,115.066)
OP1: (47.055,99.305,109.831)
OP2: (47.698,97.079,110.945)
C4: (47.028,104.133,109.555)
O5': (47.962,99.261,112.149)
C3': (49.330,101.166,113.718)
C1': (50.078,102.439,111.858)
O4': (50.220,101.065,111.537)
C5': (49.350,98.987,112.400)
P: (47.141,98.456,111.047)
O2: (49.250,105.041,112.056)
C4': (50.069,100.268,112.737)
C2': (49.871,102.550,113.374)
O2': (51.114,102.834,113.981)
N1: (48.996,103.013,111.033)
N3: (47.639,104.882,110.469)
N4: (46.065,104.700,108.828)
C6: (48.350,102.252,110.097)
C5: (47.377,102.769,109.341)
O3': (49.629,100.793,115.066)
Image (generated by PyMOL):