Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQP:0272:0273
Extra
PDB:
ATOM 1 O3' U A 271 64.434 103.226 -8.122 1.00139.73 O
ATOM 2 P C A 272 63.003 102.503 -7.952 1.00139.21 P
ATOM 3 OP1 C A 272 63.283 101.073 -7.658 1.00139.10 O
ATOM 4 OP2 C A 272 62.132 102.858 -9.104 1.00139.20 O
ATOM 5 O5' C A 272 62.378 103.165 -6.645 1.00137.77 O
ATOM 6 C5' C A 272 63.181 103.976 -5.769 1.00135.90 C
ATOM 7 C4' C A 272 62.590 105.360 -5.651 1.00134.54 C
ATOM 8 O4' C A 272 62.598 106.002 -6.959 1.00134.52 O
ATOM 9 C3' C A 272 61.148 105.421 -5.161 1.00133.60 C
ATOM 10 O3' C A 272 60.978 106.604 -4.387 1.00131.69 O
ATOM 11 C2' C A 272 60.358 105.506 -6.464 1.00133.81 C
ATOM 12 O2' C A 272 59.083 106.099 -6.314 1.00133.79 O
ATOM 13 C1' C A 272 61.281 106.377 -7.317 1.00134.00 C
ATOM 14 N1 C A 272 61.141 106.242 -8.787 1.00133.91 N
ATOM 15 C2 C A 272 61.779 107.183 -9.618 1.00133.90 C
ATOM 16 O2 C A 272 62.438 108.101 -9.104 1.00134.00 O
ATOM 17 N3 C A 272 61.660 107.067 -10.960 1.00133.90 N
ATOM 18 C4 C A 272 60.942 106.071 -11.483 1.00133.93 C
ATOM 19 N4 C A 272 60.851 105.998 -12.814 1.00133.84 N
ATOM 20 C5 C A 272 60.283 105.105 -10.668 1.00133.76 C
ATOM 21 C6 C A 272 60.408 105.226 -9.340 1.00133.73 C
ATOM 22 P A A 273 61.065 106.523 -2.784 1.00130.17 P
ATOM 23 OP1 A A 273 59.867 105.778 -2.308 1.00130.09 O
ATOM 24 OP2 A A 273 61.331 107.891 -2.266 1.00130.03 O
ATOM 25 O5' A A 273 62.364 105.633 -2.523 1.00127.33 O
TER
ATOM 1 O3' C B 272 60.978 106.604 -4.387 1.00131.69 O
ATOM 2 P A B 273 61.065 106.523 -2.784 1.00130.17 P
ATOM 3 OP1 A B 273 59.867 105.778 -2.308 1.00130.09 O
ATOM 4 OP2 A B 273 61.331 107.891 -2.266 1.00130.03 O
ATOM 5 O5' A B 273 62.364 105.633 -2.523 1.00127.33 O
ATOM 6 C5' A B 273 62.280 104.381 -1.812 1.00122.26 C
ATOM 7 C4' A B 273 63.618 104.033 -1.201 1.00118.66 C
ATOM 8 O4' A B 273 64.567 103.677 -2.241 1.00117.65 O
ATOM 9 C3' A B 273 64.304 105.158 -0.445 1.00116.39 C
ATOM 10 O3' A B 273 63.776 105.313 0.869 1.00113.54 O
ATOM 11 C2' A B 273 65.760 104.710 -0.460 1.00116.11 C
ATOM 12 O2' A B 273 66.038 103.716 0.508 1.00115.56 O
ATOM 13 C1' A B 273 65.870 104.100 -1.862 1.00116.39 C
ATOM 14 N9 A B 273 66.366 105.040 -2.874 1.00115.77 N
ATOM 15 C8 A B 273 65.666 105.620 -3.906 1.00115.12 C
ATOM 16 N7 A B 273 66.384 106.434 -4.641 1.00114.80 N
ATOM 17 C5 A B 273 67.643 106.389 -4.058 1.00114.69 C
ATOM 18 C6 A B 273 68.853 107.039 -4.366 1.00114.37 C
ATOM 19 N6 A B 273 68.997 107.900 -5.376 1.00114.11 N
ATOM 20 N1 A B 273 69.925 106.773 -3.588 1.00114.37 N
ATOM 21 C2 A B 273 69.781 105.913 -2.570 1.00114.50 C
ATOM 22 N3 A B 273 68.698 105.243 -2.179 1.00114.77 N
ATOM 23 C4 A B 273 67.650 105.529 -2.972 1.00115.17 C
ATOM 24 P U B 274 63.431 106.784 1.423 1.00111.59 P
ATOM 25 OP1 U B 274 62.682 106.633 2.696 1.00111.47 O
ATOM 26 OP2 U B 274 62.836 107.570 0.309 1.00111.61 O
ATOM 27 O5' U B 274 64.854 107.413 1.755 1.00109.40 O
TER
ATOM 2 P C A 272 63.003 102.503 -7.952 1.00139.21 P
ATOM 3 OP1 C A 272 63.283 101.073 -7.658 1.00139.10 O
ATOM 4 OP2 C A 272 62.132 102.858 -9.104 1.00139.20 O
ATOM 5 O5' C A 272 62.378 103.165 -6.645 1.00137.77 O
ATOM 6 C5' C A 272 63.181 103.976 -5.769 1.00135.90 C
ATOM 7 C4' C A 272 62.590 105.360 -5.651 1.00134.54 C
ATOM 8 O4' C A 272 62.598 106.002 -6.959 1.00134.52 O
ATOM 9 C3' C A 272 61.148 105.421 -5.161 1.00133.60 C
ATOM 10 O3' C A 272 60.978 106.604 -4.387 1.00131.69 O
ATOM 11 C2' C A 272 60.358 105.506 -6.464 1.00133.81 C
ATOM 12 O2' C A 272 59.083 106.099 -6.314 1.00133.79 O
ATOM 13 C1' C A 272 61.281 106.377 -7.317 1.00134.00 C
ATOM 14 N1 C A 272 61.141 106.242 -8.787 1.00133.91 N
ATOM 15 C2 C A 272 61.779 107.183 -9.618 1.00133.90 C
ATOM 16 O2 C A 272 62.438 108.101 -9.104 1.00134.00 O
ATOM 17 N3 C A 272 61.660 107.067 -10.960 1.00133.90 N
ATOM 18 C4 C A 272 60.942 106.071 -11.483 1.00133.93 C
ATOM 19 N4 C A 272 60.851 105.998 -12.814 1.00133.84 N
ATOM 20 C5 C A 272 60.283 105.105 -10.668 1.00133.76 C
ATOM 21 C6 C A 272 60.408 105.226 -9.340 1.00133.73 C
ATOM 22 P A A 273 61.065 106.523 -2.784 1.00130.17 P
ATOM 23 OP1 A A 273 59.867 105.778 -2.308 1.00130.09 O
ATOM 24 OP2 A A 273 61.331 107.891 -2.266 1.00130.03 O
ATOM 25 O5' A A 273 62.364 105.633 -2.523 1.00127.33 O
TER
ATOM 1 O3' C B 272 60.978 106.604 -4.387 1.00131.69 O
ATOM 2 P A B 273 61.065 106.523 -2.784 1.00130.17 P
ATOM 3 OP1 A B 273 59.867 105.778 -2.308 1.00130.09 O
ATOM 4 OP2 A B 273 61.331 107.891 -2.266 1.00130.03 O
ATOM 5 O5' A B 273 62.364 105.633 -2.523 1.00127.33 O
ATOM 6 C5' A B 273 62.280 104.381 -1.812 1.00122.26 C
ATOM 7 C4' A B 273 63.618 104.033 -1.201 1.00118.66 C
ATOM 8 O4' A B 273 64.567 103.677 -2.241 1.00117.65 O
ATOM 9 C3' A B 273 64.304 105.158 -0.445 1.00116.39 C
ATOM 10 O3' A B 273 63.776 105.313 0.869 1.00113.54 O
ATOM 11 C2' A B 273 65.760 104.710 -0.460 1.00116.11 C
ATOM 12 O2' A B 273 66.038 103.716 0.508 1.00115.56 O
ATOM 13 C1' A B 273 65.870 104.100 -1.862 1.00116.39 C
ATOM 14 N9 A B 273 66.366 105.040 -2.874 1.00115.77 N
ATOM 15 C8 A B 273 65.666 105.620 -3.906 1.00115.12 C
ATOM 16 N7 A B 273 66.384 106.434 -4.641 1.00114.80 N
ATOM 17 C5 A B 273 67.643 106.389 -4.058 1.00114.69 C
ATOM 18 C6 A B 273 68.853 107.039 -4.366 1.00114.37 C
ATOM 19 N6 A B 273 68.997 107.900 -5.376 1.00114.11 N
ATOM 20 N1 A B 273 69.925 106.773 -3.588 1.00114.37 N
ATOM 21 C2 A B 273 69.781 105.913 -2.570 1.00114.50 C
ATOM 22 N3 A B 273 68.698 105.243 -2.179 1.00114.77 N
ATOM 23 C4 A B 273 67.650 105.529 -2.972 1.00115.17 C
ATOM 24 P U B 274 63.431 106.784 1.423 1.00111.59 P
ATOM 25 OP1 U B 274 62.682 106.633 2.696 1.00111.47 O
ATOM 26 OP2 U B 274 62.836 107.570 0.309 1.00111.61 O
ATOM 27 O5' U B 274 64.854 107.413 1.755 1.00109.40 O
TER
Atoms:
C2: (61.779,107.183,-9.618)
OP1: (63.283,101.073,-7.658)
OP2: (62.132,102.858,-9.104)
C4: (60.942,106.071,-11.483)
O5': (62.378,103.165,-6.645)
C3': (61.148,105.421,-5.161)
C1': (61.281,106.377,-7.317)
O4': (62.598,106.002,-6.959)
C5': (63.181,103.976,-5.769)
P: (63.003,102.503,-7.952)
O2: (62.438,108.101,-9.104)
C4': (62.590,105.360,-5.651)
C2': (60.358,105.506,-6.464)
O2': (59.083,106.099,-6.314)
N1: (61.141,106.242,-8.787)
N3: (61.660,107.067,-10.960)
N4: (60.851,105.998,-12.814)
C6: (60.408,105.226,-9.340)
C5: (60.283,105.105,-10.668)
O3': (60.978,106.604,-4.387)
OP1: (63.283,101.073,-7.658)
OP2: (62.132,102.858,-9.104)
C4: (60.942,106.071,-11.483)
O5': (62.378,103.165,-6.645)
C3': (61.148,105.421,-5.161)
C1': (61.281,106.377,-7.317)
O4': (62.598,106.002,-6.959)
C5': (63.181,103.976,-5.769)
P: (63.003,102.503,-7.952)
O2: (62.438,108.101,-9.104)
C4': (62.590,105.360,-5.651)
C2': (60.358,105.506,-6.464)
O2': (59.083,106.099,-6.314)
N1: (61.141,106.242,-8.787)
N3: (61.660,107.067,-10.960)
N4: (60.851,105.998,-12.814)
C6: (60.408,105.226,-9.340)
C5: (60.283,105.105,-10.668)
O3': (60.978,106.604,-4.387)
OP1: (59.867,105.778,-2.308)
OP2: (61.331,107.891,-2.266)
C3': (64.304,105.158,-0.445)
C1': (65.870,104.100,-1.862)
C5': (62.280,104.381,-1.812)
O4': (64.567,103.677,-2.241)
C8: (65.666,105.620,-3.906)
O2': (66.038,103.716,0.508)
C6: (68.853,107.039,-4.366)
C5: (67.643,106.389,-4.058)
C4: (67.650,105.529,-2.972)
P: (61.065,106.523,-2.784)
C4': (63.618,104.033,-1.201)
C2': (65.760,104.710,-0.460)
C2: (69.781,105.913,-2.570)
N1: (69.925,106.773,-3.588)
N3: (68.698,105.243,-2.179)
N6: (68.997,107.900,-5.376)
N7: (66.384,106.434,-4.641)
N9: (66.366,105.040,-2.874)
O5': (62.364,105.633,-2.523)
O3': (63.776,105.313,0.869)
OP2: (61.331,107.891,-2.266)
C3': (64.304,105.158,-0.445)
C1': (65.870,104.100,-1.862)
C5': (62.280,104.381,-1.812)
O4': (64.567,103.677,-2.241)
C8: (65.666,105.620,-3.906)
O2': (66.038,103.716,0.508)
C6: (68.853,107.039,-4.366)
C5: (67.643,106.389,-4.058)
C4: (67.650,105.529,-2.972)
P: (61.065,106.523,-2.784)
C4': (63.618,104.033,-1.201)
C2': (65.760,104.710,-0.460)
C2: (69.781,105.913,-2.570)
N1: (69.925,106.773,-3.588)
N3: (68.698,105.243,-2.179)
N6: (68.997,107.900,-5.376)
N7: (66.384,106.434,-4.641)
N9: (66.366,105.040,-2.874)
O5': (62.364,105.633,-2.523)
O3': (63.776,105.313,0.869)
Image (generated by PyMOL):