Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YHQ:0272:0273
Extra
PDB:
ATOM 1 O3' U A 271 64.861 103.565 -7.882 1.00132.30 O
ATOM 2 P C A 272 63.448 102.829 -7.636 1.00132.06 P
ATOM 3 OP1 C A 272 63.761 101.433 -7.230 1.00132.48 O
ATOM 4 OP2 C A 272 62.546 103.071 -8.792 1.00132.60 O
ATOM 5 O5' C A 272 62.832 103.577 -6.373 1.00129.92 O
ATOM 6 C5' C A 272 63.664 104.379 -5.525 1.00127.44 C
ATOM 7 C4' C A 272 63.221 105.819 -5.575 1.00125.49 C
ATOM 8 O4' C A 272 63.357 106.331 -6.935 1.00125.68 O
ATOM 9 C3' C A 272 61.772 106.068 -5.173 1.00123.95 C
ATOM 10 O3' C A 272 61.703 107.308 -4.487 1.00120.65 O
ATOM 11 C2' C A 272 61.062 106.165 -6.518 1.00124.61 C
ATOM 12 O2' C A 272 59.861 106.910 -6.470 1.00125.24 O
ATOM 13 C1' C A 272 62.122 106.878 -7.357 1.00125.09 C
ATOM 14 N1 C A 272 62.000 106.734 -8.827 1.00124.89 N
ATOM 15 C2 C A 272 62.589 107.710 -9.657 1.00124.49 C
ATOM 16 O2 C A 272 63.221 108.646 -9.143 1.00124.03 O
ATOM 17 N3 C A 272 62.453 107.603 -10.997 1.00124.55 N
ATOM 18 C4 C A 272 61.777 106.579 -11.521 1.00125.10 C
ATOM 19 N4 C A 272 61.666 106.518 -12.851 1.00125.09 N
ATOM 20 C5 C A 272 61.184 105.570 -10.708 1.00124.98 C
ATOM 21 C6 C A 272 61.319 105.684 -9.381 1.00124.93 C
ATOM 22 P A A 273 61.765 107.325 -2.885 1.00118.37 P
ATOM 23 OP1 A A 273 60.523 106.674 -2.388 1.00118.71 O
ATOM 24 OP2 A A 273 62.095 108.705 -2.445 1.00118.86 O
ATOM 25 O5' A A 273 63.010 106.385 -2.559 1.00114.29 O
TER
ATOM 1 O3' C B 272 61.703 107.308 -4.487 1.00120.65 O
ATOM 2 P A B 273 61.765 107.325 -2.885 1.00118.37 P
ATOM 3 OP1 A B 273 60.523 106.674 -2.388 1.00118.71 O
ATOM 4 OP2 A B 273 62.095 108.705 -2.445 1.00118.86 O
ATOM 5 O5' A B 273 63.010 106.385 -2.559 1.00114.29 O
ATOM 6 C5' A B 273 62.835 105.125 -1.883 1.00107.45 C
ATOM 7 C4' A B 273 64.134 104.687 -1.252 1.00102.23 C
ATOM 8 O4' A B 273 65.076 104.287 -2.283 1.00100.84 O
ATOM 9 C3' A B 273 64.875 105.762 -0.475 1.00 99.13 C
ATOM 10 O3' A B 273 64.333 105.949 0.827 1.00 95.20 O
ATOM 11 C2' A B 273 66.300 105.225 -0.473 1.00 98.79 C
ATOM 12 O2' A B 273 66.499 104.200 0.481 1.00 98.42 O
ATOM 13 C1' A B 273 66.396 104.629 -1.882 1.00 98.77 C
ATOM 14 N9 A B 273 66.955 105.555 -2.871 1.00 97.20 N
ATOM 15 C8 A B 273 66.300 106.200 -3.895 1.00 96.54 C
ATOM 16 N7 A B 273 67.073 106.983 -4.608 1.00 95.76 N
ATOM 17 C5 A B 273 68.322 106.846 -4.019 1.00 95.00 C
ATOM 18 C6 A B 273 69.573 107.423 -4.306 1.00 94.32 C
ATOM 19 N6 A B 273 69.781 108.291 -5.299 1.00 93.44 N
ATOM 20 N1 A B 273 70.617 107.074 -3.526 1.00 94.38 N
ATOM 21 C2 A B 273 70.410 106.205 -2.528 1.00 94.76 C
ATOM 22 N3 A B 273 69.286 105.597 -2.159 1.00 94.91 N
ATOM 23 C4 A B 273 68.266 105.965 -2.952 1.00 95.58 C
ATOM 24 P U B 274 64.092 107.440 1.385 1.00 92.47 P
ATOM 25 OP1 U B 274 63.364 107.331 2.676 1.00 92.19 O
ATOM 26 OP2 U B 274 63.519 108.262 0.288 1.00 91.83 O
ATOM 27 O5' U B 274 65.560 107.980 1.683 1.00 88.81 O
TER
ATOM 2 P C A 272 63.448 102.829 -7.636 1.00132.06 P
ATOM 3 OP1 C A 272 63.761 101.433 -7.230 1.00132.48 O
ATOM 4 OP2 C A 272 62.546 103.071 -8.792 1.00132.60 O
ATOM 5 O5' C A 272 62.832 103.577 -6.373 1.00129.92 O
ATOM 6 C5' C A 272 63.664 104.379 -5.525 1.00127.44 C
ATOM 7 C4' C A 272 63.221 105.819 -5.575 1.00125.49 C
ATOM 8 O4' C A 272 63.357 106.331 -6.935 1.00125.68 O
ATOM 9 C3' C A 272 61.772 106.068 -5.173 1.00123.95 C
ATOM 10 O3' C A 272 61.703 107.308 -4.487 1.00120.65 O
ATOM 11 C2' C A 272 61.062 106.165 -6.518 1.00124.61 C
ATOM 12 O2' C A 272 59.861 106.910 -6.470 1.00125.24 O
ATOM 13 C1' C A 272 62.122 106.878 -7.357 1.00125.09 C
ATOM 14 N1 C A 272 62.000 106.734 -8.827 1.00124.89 N
ATOM 15 C2 C A 272 62.589 107.710 -9.657 1.00124.49 C
ATOM 16 O2 C A 272 63.221 108.646 -9.143 1.00124.03 O
ATOM 17 N3 C A 272 62.453 107.603 -10.997 1.00124.55 N
ATOM 18 C4 C A 272 61.777 106.579 -11.521 1.00125.10 C
ATOM 19 N4 C A 272 61.666 106.518 -12.851 1.00125.09 N
ATOM 20 C5 C A 272 61.184 105.570 -10.708 1.00124.98 C
ATOM 21 C6 C A 272 61.319 105.684 -9.381 1.00124.93 C
ATOM 22 P A A 273 61.765 107.325 -2.885 1.00118.37 P
ATOM 23 OP1 A A 273 60.523 106.674 -2.388 1.00118.71 O
ATOM 24 OP2 A A 273 62.095 108.705 -2.445 1.00118.86 O
ATOM 25 O5' A A 273 63.010 106.385 -2.559 1.00114.29 O
TER
ATOM 1 O3' C B 272 61.703 107.308 -4.487 1.00120.65 O
ATOM 2 P A B 273 61.765 107.325 -2.885 1.00118.37 P
ATOM 3 OP1 A B 273 60.523 106.674 -2.388 1.00118.71 O
ATOM 4 OP2 A B 273 62.095 108.705 -2.445 1.00118.86 O
ATOM 5 O5' A B 273 63.010 106.385 -2.559 1.00114.29 O
ATOM 6 C5' A B 273 62.835 105.125 -1.883 1.00107.45 C
ATOM 7 C4' A B 273 64.134 104.687 -1.252 1.00102.23 C
ATOM 8 O4' A B 273 65.076 104.287 -2.283 1.00100.84 O
ATOM 9 C3' A B 273 64.875 105.762 -0.475 1.00 99.13 C
ATOM 10 O3' A B 273 64.333 105.949 0.827 1.00 95.20 O
ATOM 11 C2' A B 273 66.300 105.225 -0.473 1.00 98.79 C
ATOM 12 O2' A B 273 66.499 104.200 0.481 1.00 98.42 O
ATOM 13 C1' A B 273 66.396 104.629 -1.882 1.00 98.77 C
ATOM 14 N9 A B 273 66.955 105.555 -2.871 1.00 97.20 N
ATOM 15 C8 A B 273 66.300 106.200 -3.895 1.00 96.54 C
ATOM 16 N7 A B 273 67.073 106.983 -4.608 1.00 95.76 N
ATOM 17 C5 A B 273 68.322 106.846 -4.019 1.00 95.00 C
ATOM 18 C6 A B 273 69.573 107.423 -4.306 1.00 94.32 C
ATOM 19 N6 A B 273 69.781 108.291 -5.299 1.00 93.44 N
ATOM 20 N1 A B 273 70.617 107.074 -3.526 1.00 94.38 N
ATOM 21 C2 A B 273 70.410 106.205 -2.528 1.00 94.76 C
ATOM 22 N3 A B 273 69.286 105.597 -2.159 1.00 94.91 N
ATOM 23 C4 A B 273 68.266 105.965 -2.952 1.00 95.58 C
ATOM 24 P U B 274 64.092 107.440 1.385 1.00 92.47 P
ATOM 25 OP1 U B 274 63.364 107.331 2.676 1.00 92.19 O
ATOM 26 OP2 U B 274 63.519 108.262 0.288 1.00 91.83 O
ATOM 27 O5' U B 274 65.560 107.980 1.683 1.00 88.81 O
TER
Atoms:
C2: (62.589,107.710,-9.657)
OP1: (63.761,101.433,-7.230)
OP2: (62.546,103.071,-8.792)
C4: (61.777,106.579,-11.521)
O5': (62.832,103.577,-6.373)
C3': (61.772,106.068,-5.173)
C1': (62.122,106.878,-7.357)
O4': (63.357,106.331,-6.935)
C5': (63.664,104.379,-5.525)
P: (63.448,102.829,-7.636)
O2: (63.221,108.646,-9.143)
C4': (63.221,105.819,-5.575)
C2': (61.062,106.165,-6.518)
O2': (59.861,106.910,-6.470)
N1: (62.000,106.734,-8.827)
N3: (62.453,107.603,-10.997)
N4: (61.666,106.518,-12.851)
C6: (61.319,105.684,-9.381)
C5: (61.184,105.570,-10.708)
O3': (61.703,107.308,-4.487)
OP1: (63.761,101.433,-7.230)
OP2: (62.546,103.071,-8.792)
C4: (61.777,106.579,-11.521)
O5': (62.832,103.577,-6.373)
C3': (61.772,106.068,-5.173)
C1': (62.122,106.878,-7.357)
O4': (63.357,106.331,-6.935)
C5': (63.664,104.379,-5.525)
P: (63.448,102.829,-7.636)
O2: (63.221,108.646,-9.143)
C4': (63.221,105.819,-5.575)
C2': (61.062,106.165,-6.518)
O2': (59.861,106.910,-6.470)
N1: (62.000,106.734,-8.827)
N3: (62.453,107.603,-10.997)
N4: (61.666,106.518,-12.851)
C6: (61.319,105.684,-9.381)
C5: (61.184,105.570,-10.708)
O3': (61.703,107.308,-4.487)
OP1: (60.523,106.674,-2.388)
OP2: (62.095,108.705,-2.445)
C3': (64.875,105.762,-0.475)
C1': (66.396,104.629,-1.882)
C5': (62.835,105.125,-1.883)
O4': (65.076,104.287,-2.283)
C8: (66.300,106.200,-3.895)
O2': (66.499,104.200,0.481)
C6: (69.573,107.423,-4.306)
C5: (68.322,106.846,-4.019)
C4: (68.266,105.965,-2.952)
P: (61.765,107.325,-2.885)
C4': (64.134,104.687,-1.252)
C2': (66.300,105.225,-0.473)
C2: (70.410,106.205,-2.528)
N1: (70.617,107.074,-3.526)
N3: (69.286,105.597,-2.159)
N6: (69.781,108.291,-5.299)
N7: (67.073,106.983,-4.608)
N9: (66.955,105.555,-2.871)
O5': (63.010,106.385,-2.559)
O3': (64.333,105.949,0.827)
OP2: (62.095,108.705,-2.445)
C3': (64.875,105.762,-0.475)
C1': (66.396,104.629,-1.882)
C5': (62.835,105.125,-1.883)
O4': (65.076,104.287,-2.283)
C8: (66.300,106.200,-3.895)
O2': (66.499,104.200,0.481)
C6: (69.573,107.423,-4.306)
C5: (68.322,106.846,-4.019)
C4: (68.266,105.965,-2.952)
P: (61.765,107.325,-2.885)
C4': (64.134,104.687,-1.252)
C2': (66.300,105.225,-0.473)
C2: (70.410,106.205,-2.528)
N1: (70.617,107.074,-3.526)
N3: (69.286,105.597,-2.159)
N6: (69.781,108.291,-5.299)
N7: (67.073,106.983,-4.608)
N9: (66.955,105.555,-2.871)
O5': (63.010,106.385,-2.559)
O3': (64.333,105.949,0.827)
Image (generated by PyMOL):