Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQN:0258:0228
Extra
PDB:
ATOM 1 O3' G A 257 78.839 103.725 -0.346 1.00 65.14 O
ATOM 2 P U A 258 77.336 103.708 0.218 1.00 66.21 P
ATOM 3 OP1 U A 258 76.652 102.481 -0.273 1.00 66.97 O
ATOM 4 OP2 U A 258 76.727 105.039 -0.049 1.00 65.76 O
ATOM 5 O5' U A 258 77.555 103.547 1.785 1.00 68.09 O
ATOM 6 C5' U A 258 78.238 102.393 2.306 1.00 69.76 C
ATOM 7 C4' U A 258 78.488 102.552 3.785 1.00 71.11 C
ATOM 8 O4' U A 258 79.557 103.519 4.006 1.00 67.95 O
ATOM 9 C3' U A 258 77.292 103.040 4.601 1.00 73.28 C
ATOM 10 O3' U A 258 77.264 102.375 5.862 1.00 81.39 O
ATOM 11 C2' U A 258 77.612 104.520 4.801 1.00 69.53 C
ATOM 12 O2' U A 258 76.985 105.064 5.946 1.00 68.63 O
ATOM 13 C1' U A 258 79.131 104.458 4.967 1.00 65.71 C
ATOM 14 N1 U A 258 79.924 105.697 4.833 1.00 60.33 N
ATOM 15 C2 U A 258 81.275 105.630 5.168 1.00 56.97 C
ATOM 16 O2 U A 258 81.834 104.595 5.469 1.00 55.23 O
ATOM 17 N3 U A 258 81.941 106.829 5.153 1.00 56.23 N
ATOM 18 C4 U A 258 81.415 108.064 4.850 1.00 57.50 C
ATOM 19 O4 U A 258 82.132 109.070 4.957 1.00 56.90 O
ATOM 20 C5 U A 258 80.041 108.050 4.436 1.00 56.75 C
ATOM 21 C6 U A 258 79.362 106.895 4.430 1.00 58.45 C
ATOM 22 P C A 259 75.872 101.806 6.438 1.00 86.87 P
ATOM 23 OP1 C A 259 74.768 102.727 6.050 1.00 86.07 O
ATOM 24 OP2 C A 259 76.096 101.496 7.873 1.00 88.28 O
ATOM 25 O5' C A 259 75.653 100.428 5.672 1.00 90.40 O
TER
ATOM 1 O3' C B 227 76.690 112.371 4.497 1.00 55.48 O
ATOM 2 P C B 228 78.131 112.065 3.861 1.00 57.36 P
ATOM 3 OP1 C B 228 78.277 112.980 2.697 1.00 60.80 O
ATOM 4 OP2 C B 228 78.291 110.597 3.676 1.00 57.19 O
ATOM 5 O5' C B 228 79.155 112.522 4.994 1.00 56.57 O
ATOM 6 C5' C B 228 80.508 112.050 4.995 1.00 52.62 C
ATOM 7 C4' C B 228 81.133 112.263 6.349 1.00 52.86 C
ATOM 8 O4' C B 228 80.469 111.435 7.342 1.00 51.32 O
ATOM 9 C3' C B 228 82.590 111.851 6.426 1.00 53.30 C
ATOM 10 O3' C B 228 83.413 112.924 5.975 1.00 54.46 O
ATOM 11 C2' C B 228 82.784 111.580 7.913 1.00 52.22 C
ATOM 12 O2' C B 228 82.995 112.766 8.650 1.00 56.46 O
ATOM 13 C1' C B 228 81.422 110.995 8.305 1.00 49.92 C
ATOM 14 N1 C B 228 81.359 109.518 8.427 1.00 45.54 N
ATOM 15 C2 C B 228 82.333 108.845 9.198 1.00 45.74 C
ATOM 16 O2 C B 228 83.217 109.504 9.774 1.00 46.33 O
ATOM 17 N3 C B 228 82.279 107.494 9.297 1.00 44.98 N
ATOM 18 C4 C B 228 81.308 106.817 8.676 1.00 44.50 C
ATOM 19 N4 C B 228 81.310 105.492 8.783 1.00 42.82 N
ATOM 20 C5 C B 228 80.296 107.473 7.910 1.00 42.82 C
ATOM 21 C6 C B 228 80.363 108.807 7.809 1.00 44.78 C
ATOM 22 P A B 229 84.795 112.616 5.226 1.00 54.10 P
ATOM 23 OP1 A B 229 85.552 113.894 5.158 1.00 55.89 O
ATOM 24 OP2 A B 229 84.472 111.882 3.978 1.00 57.07 O
ATOM 25 O5' A B 229 85.567 111.625 6.201 1.00 54.74 O
TER
ATOM 2 P U A 258 77.336 103.708 0.218 1.00 66.21 P
ATOM 3 OP1 U A 258 76.652 102.481 -0.273 1.00 66.97 O
ATOM 4 OP2 U A 258 76.727 105.039 -0.049 1.00 65.76 O
ATOM 5 O5' U A 258 77.555 103.547 1.785 1.00 68.09 O
ATOM 6 C5' U A 258 78.238 102.393 2.306 1.00 69.76 C
ATOM 7 C4' U A 258 78.488 102.552 3.785 1.00 71.11 C
ATOM 8 O4' U A 258 79.557 103.519 4.006 1.00 67.95 O
ATOM 9 C3' U A 258 77.292 103.040 4.601 1.00 73.28 C
ATOM 10 O3' U A 258 77.264 102.375 5.862 1.00 81.39 O
ATOM 11 C2' U A 258 77.612 104.520 4.801 1.00 69.53 C
ATOM 12 O2' U A 258 76.985 105.064 5.946 1.00 68.63 O
ATOM 13 C1' U A 258 79.131 104.458 4.967 1.00 65.71 C
ATOM 14 N1 U A 258 79.924 105.697 4.833 1.00 60.33 N
ATOM 15 C2 U A 258 81.275 105.630 5.168 1.00 56.97 C
ATOM 16 O2 U A 258 81.834 104.595 5.469 1.00 55.23 O
ATOM 17 N3 U A 258 81.941 106.829 5.153 1.00 56.23 N
ATOM 18 C4 U A 258 81.415 108.064 4.850 1.00 57.50 C
ATOM 19 O4 U A 258 82.132 109.070 4.957 1.00 56.90 O
ATOM 20 C5 U A 258 80.041 108.050 4.436 1.00 56.75 C
ATOM 21 C6 U A 258 79.362 106.895 4.430 1.00 58.45 C
ATOM 22 P C A 259 75.872 101.806 6.438 1.00 86.87 P
ATOM 23 OP1 C A 259 74.768 102.727 6.050 1.00 86.07 O
ATOM 24 OP2 C A 259 76.096 101.496 7.873 1.00 88.28 O
ATOM 25 O5' C A 259 75.653 100.428 5.672 1.00 90.40 O
TER
ATOM 1 O3' C B 227 76.690 112.371 4.497 1.00 55.48 O
ATOM 2 P C B 228 78.131 112.065 3.861 1.00 57.36 P
ATOM 3 OP1 C B 228 78.277 112.980 2.697 1.00 60.80 O
ATOM 4 OP2 C B 228 78.291 110.597 3.676 1.00 57.19 O
ATOM 5 O5' C B 228 79.155 112.522 4.994 1.00 56.57 O
ATOM 6 C5' C B 228 80.508 112.050 4.995 1.00 52.62 C
ATOM 7 C4' C B 228 81.133 112.263 6.349 1.00 52.86 C
ATOM 8 O4' C B 228 80.469 111.435 7.342 1.00 51.32 O
ATOM 9 C3' C B 228 82.590 111.851 6.426 1.00 53.30 C
ATOM 10 O3' C B 228 83.413 112.924 5.975 1.00 54.46 O
ATOM 11 C2' C B 228 82.784 111.580 7.913 1.00 52.22 C
ATOM 12 O2' C B 228 82.995 112.766 8.650 1.00 56.46 O
ATOM 13 C1' C B 228 81.422 110.995 8.305 1.00 49.92 C
ATOM 14 N1 C B 228 81.359 109.518 8.427 1.00 45.54 N
ATOM 15 C2 C B 228 82.333 108.845 9.198 1.00 45.74 C
ATOM 16 O2 C B 228 83.217 109.504 9.774 1.00 46.33 O
ATOM 17 N3 C B 228 82.279 107.494 9.297 1.00 44.98 N
ATOM 18 C4 C B 228 81.308 106.817 8.676 1.00 44.50 C
ATOM 19 N4 C B 228 81.310 105.492 8.783 1.00 42.82 N
ATOM 20 C5 C B 228 80.296 107.473 7.910 1.00 42.82 C
ATOM 21 C6 C B 228 80.363 108.807 7.809 1.00 44.78 C
ATOM 22 P A B 229 84.795 112.616 5.226 1.00 54.10 P
ATOM 23 OP1 A B 229 85.552 113.894 5.158 1.00 55.89 O
ATOM 24 OP2 A B 229 84.472 111.882 3.978 1.00 57.07 O
ATOM 25 O5' A B 229 85.567 111.625 6.201 1.00 54.74 O
TER
Atoms:
C4: (81.415,108.064,4.850)
N3: (81.941,106.829,5.153)
OP1: (76.652,102.481,-0.273)
OP2: (76.727,105.039,-0.049)
C2: (81.275,105.630,5.168)
C1': (79.131,104.458,4.967)
C3': (77.292,103.040,4.601)
O5': (77.555,103.547,1.785)
O4': (79.557,103.519,4.006)
C5': (78.238,102.393,2.306)
P: (77.336,103.708,0.218)
C4': (78.488,102.552,3.785)
C2': (77.612,104.520,4.801)
O2': (76.985,105.064,5.946)
N1: (79.924,105.697,4.833)
O4: (82.132,109.070,4.957)
O2: (81.834,104.595,5.469)
C6: (79.362,106.895,4.430)
C5: (80.041,108.050,4.436)
O3': (77.264,102.375,5.862)
N3: (81.941,106.829,5.153)
OP1: (76.652,102.481,-0.273)
OP2: (76.727,105.039,-0.049)
C2: (81.275,105.630,5.168)
C1': (79.131,104.458,4.967)
C3': (77.292,103.040,4.601)
O5': (77.555,103.547,1.785)
O4': (79.557,103.519,4.006)
C5': (78.238,102.393,2.306)
P: (77.336,103.708,0.218)
C4': (78.488,102.552,3.785)
C2': (77.612,104.520,4.801)
O2': (76.985,105.064,5.946)
N1: (79.924,105.697,4.833)
O4: (82.132,109.070,4.957)
O2: (81.834,104.595,5.469)
C6: (79.362,106.895,4.430)
C5: (80.041,108.050,4.436)
O3': (77.264,102.375,5.862)
C2: (82.333,108.845,9.198)
OP1: (78.277,112.980,2.697)
OP2: (78.291,110.597,3.676)
C4: (81.308,106.817,8.676)
O5': (79.155,112.522,4.994)
C3': (82.590,111.851,6.426)
C1': (81.422,110.995,8.305)
O4': (80.469,111.435,7.342)
C5': (80.508,112.050,4.995)
P: (78.131,112.065,3.861)
O2: (83.217,109.504,9.774)
C4': (81.133,112.263,6.349)
C2': (82.784,111.580,7.913)
O2': (82.995,112.766,8.650)
N1: (81.359,109.518,8.427)
N3: (82.279,107.494,9.297)
N4: (81.310,105.492,8.783)
C6: (80.363,108.807,7.809)
C5: (80.296,107.473,7.910)
O3': (83.413,112.924,5.975)
OP1: (78.277,112.980,2.697)
OP2: (78.291,110.597,3.676)
C4: (81.308,106.817,8.676)
O5': (79.155,112.522,4.994)
C3': (82.590,111.851,6.426)
C1': (81.422,110.995,8.305)
O4': (80.469,111.435,7.342)
C5': (80.508,112.050,4.995)
P: (78.131,112.065,3.861)
O2: (83.217,109.504,9.774)
C4': (81.133,112.263,6.349)
C2': (82.784,111.580,7.913)
O2': (82.995,112.766,8.650)
N1: (81.359,109.518,8.427)
N3: (82.279,107.494,9.297)
N4: (81.310,105.492,8.783)
C6: (80.363,108.807,7.809)
C5: (80.296,107.473,7.910)
O3': (83.413,112.924,5.975)
Image (generated by PyMOL):