Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQO:01087:01086
Extra
PDB:
ATOM 1 O3' C A1086 49.714 101.137 115.162 1.00 48.09 O
ATOM 2 P U A1087 48.505 100.755 116.146 1.00 48.48 P
ATOM 3 OP1 U A1087 49.074 100.663 117.512 1.00 50.47 O
ATOM 4 OP2 U A1087 47.790 99.592 115.573 1.00 45.81 O
ATOM 5 O5' U A1087 47.530 102.012 116.096 1.00 46.91 O
ATOM 6 C5' U A1087 47.988 103.318 116.462 1.00 47.65 C
ATOM 7 C4' U A1087 46.862 104.316 116.331 1.00 49.03 C
ATOM 8 O4' U A1087 46.569 104.541 114.920 1.00 50.06 O
ATOM 9 C3' U A1087 45.537 103.907 116.974 1.00 48.60 C
ATOM 10 O3' U A1087 44.911 105.052 117.521 1.00 48.14 O
ATOM 11 C2' U A1087 44.729 103.407 115.782 1.00 49.05 C
ATOM 12 O2' U A1087 43.333 103.475 115.964 1.00 50.57 O
ATOM 13 C1' U A1087 45.181 104.385 114.703 1.00 47.59 C
ATOM 14 N1 U A1087 44.956 103.937 113.321 1.00 45.62 N
ATOM 15 C2 U A1087 44.278 104.800 112.472 1.00 44.92 C
ATOM 16 O2 U A1087 43.885 105.905 112.812 1.00 47.68 O
ATOM 17 N3 U A1087 44.076 104.325 111.207 1.00 43.28 N
ATOM 18 C4 U A1087 44.469 103.111 110.706 1.00 42.98 C
ATOM 19 O4 U A1087 44.201 102.831 109.542 1.00 41.68 O
ATOM 20 C5 U A1087 45.175 102.276 111.635 1.00 44.56 C
ATOM 21 C6 U A1087 45.389 102.708 112.879 1.00 44.86 C
ATOM 22 P C A1088 44.984 105.310 119.105 1.00 51.96 P
ATOM 23 OP1 C A1088 44.373 106.646 119.377 1.00 52.05 O
ATOM 24 OP2 C A1088 46.389 105.050 119.515 1.00 51.63 O
ATOM 25 O5' C A1088 44.061 104.165 119.719 1.00 49.92 O
TER
ATOM 1 O3' C B1085 45.783 98.754 111.736 1.00 49.52 O
ATOM 2 P C B1086 47.255 98.820 111.104 1.00 50.07 P
ATOM 3 OP1 C B1086 47.178 99.635 109.865 1.00 52.19 O
ATOM 4 OP2 C B1086 47.797 97.439 111.042 1.00 50.51 O
ATOM 5 O5' C B1086 48.077 99.650 112.184 1.00 48.55 O
ATOM 6 C5' C B1086 49.438 99.327 112.493 1.00 45.27 C
ATOM 7 C4' C B1086 50.183 100.583 112.845 1.00 46.82 C
ATOM 8 O4' C B1086 50.369 101.373 111.646 1.00 45.63 O
ATOM 9 C3' C B1086 49.452 101.504 113.810 1.00 46.70 C
ATOM 10 O3' C B1086 49.714 101.137 115.162 1.00 48.09 O
ATOM 11 C2' C B1086 50.061 102.856 113.483 1.00 46.75 C
ATOM 12 O2' C B1086 51.313 103.034 114.111 1.00 49.25 O
ATOM 13 C1' C B1086 50.264 102.747 111.965 1.00 46.19 C
ATOM 14 N1 C B1086 49.187 103.348 111.144 1.00 44.55 N
ATOM 15 C2 C B1086 48.888 104.705 111.316 1.00 44.31 C
ATOM 16 O2 C B1086 49.548 105.367 112.133 1.00 48.00 O
ATOM 17 N3 C B1086 47.901 105.266 110.582 1.00 42.53 N
ATOM 18 C4 C B1086 47.239 104.536 109.687 1.00 42.31 C
ATOM 19 N4 C B1086 46.288 105.145 108.975 1.00 41.72 N
ATOM 20 C5 C B1086 47.526 103.152 109.479 1.00 41.22 C
ATOM 21 C6 C B1086 48.492 102.603 110.227 1.00 42.62 C
ATOM 22 P U B1087 48.505 100.755 116.146 1.00 48.48 P
ATOM 23 OP1 U B1087 49.074 100.663 117.512 1.00 50.47 O
ATOM 24 OP2 U B1087 47.790 99.592 115.573 1.00 45.81 O
ATOM 25 O5' U B1087 47.530 102.012 116.096 1.00 46.91 O
TER
ATOM 2 P U A1087 48.505 100.755 116.146 1.00 48.48 P
ATOM 3 OP1 U A1087 49.074 100.663 117.512 1.00 50.47 O
ATOM 4 OP2 U A1087 47.790 99.592 115.573 1.00 45.81 O
ATOM 5 O5' U A1087 47.530 102.012 116.096 1.00 46.91 O
ATOM 6 C5' U A1087 47.988 103.318 116.462 1.00 47.65 C
ATOM 7 C4' U A1087 46.862 104.316 116.331 1.00 49.03 C
ATOM 8 O4' U A1087 46.569 104.541 114.920 1.00 50.06 O
ATOM 9 C3' U A1087 45.537 103.907 116.974 1.00 48.60 C
ATOM 10 O3' U A1087 44.911 105.052 117.521 1.00 48.14 O
ATOM 11 C2' U A1087 44.729 103.407 115.782 1.00 49.05 C
ATOM 12 O2' U A1087 43.333 103.475 115.964 1.00 50.57 O
ATOM 13 C1' U A1087 45.181 104.385 114.703 1.00 47.59 C
ATOM 14 N1 U A1087 44.956 103.937 113.321 1.00 45.62 N
ATOM 15 C2 U A1087 44.278 104.800 112.472 1.00 44.92 C
ATOM 16 O2 U A1087 43.885 105.905 112.812 1.00 47.68 O
ATOM 17 N3 U A1087 44.076 104.325 111.207 1.00 43.28 N
ATOM 18 C4 U A1087 44.469 103.111 110.706 1.00 42.98 C
ATOM 19 O4 U A1087 44.201 102.831 109.542 1.00 41.68 O
ATOM 20 C5 U A1087 45.175 102.276 111.635 1.00 44.56 C
ATOM 21 C6 U A1087 45.389 102.708 112.879 1.00 44.86 C
ATOM 22 P C A1088 44.984 105.310 119.105 1.00 51.96 P
ATOM 23 OP1 C A1088 44.373 106.646 119.377 1.00 52.05 O
ATOM 24 OP2 C A1088 46.389 105.050 119.515 1.00 51.63 O
ATOM 25 O5' C A1088 44.061 104.165 119.719 1.00 49.92 O
TER
ATOM 1 O3' C B1085 45.783 98.754 111.736 1.00 49.52 O
ATOM 2 P C B1086 47.255 98.820 111.104 1.00 50.07 P
ATOM 3 OP1 C B1086 47.178 99.635 109.865 1.00 52.19 O
ATOM 4 OP2 C B1086 47.797 97.439 111.042 1.00 50.51 O
ATOM 5 O5' C B1086 48.077 99.650 112.184 1.00 48.55 O
ATOM 6 C5' C B1086 49.438 99.327 112.493 1.00 45.27 C
ATOM 7 C4' C B1086 50.183 100.583 112.845 1.00 46.82 C
ATOM 8 O4' C B1086 50.369 101.373 111.646 1.00 45.63 O
ATOM 9 C3' C B1086 49.452 101.504 113.810 1.00 46.70 C
ATOM 10 O3' C B1086 49.714 101.137 115.162 1.00 48.09 O
ATOM 11 C2' C B1086 50.061 102.856 113.483 1.00 46.75 C
ATOM 12 O2' C B1086 51.313 103.034 114.111 1.00 49.25 O
ATOM 13 C1' C B1086 50.264 102.747 111.965 1.00 46.19 C
ATOM 14 N1 C B1086 49.187 103.348 111.144 1.00 44.55 N
ATOM 15 C2 C B1086 48.888 104.705 111.316 1.00 44.31 C
ATOM 16 O2 C B1086 49.548 105.367 112.133 1.00 48.00 O
ATOM 17 N3 C B1086 47.901 105.266 110.582 1.00 42.53 N
ATOM 18 C4 C B1086 47.239 104.536 109.687 1.00 42.31 C
ATOM 19 N4 C B1086 46.288 105.145 108.975 1.00 41.72 N
ATOM 20 C5 C B1086 47.526 103.152 109.479 1.00 41.22 C
ATOM 21 C6 C B1086 48.492 102.603 110.227 1.00 42.62 C
ATOM 22 P U B1087 48.505 100.755 116.146 1.00 48.48 P
ATOM 23 OP1 U B1087 49.074 100.663 117.512 1.00 50.47 O
ATOM 24 OP2 U B1087 47.790 99.592 115.573 1.00 45.81 O
ATOM 25 O5' U B1087 47.530 102.012 116.096 1.00 46.91 O
TER
Atoms:
C4: (44.469,103.111,110.706)
N3: (44.076,104.325,111.207)
OP1: (49.074,100.663,117.512)
OP2: (47.790,99.592,115.573)
C2: (44.278,104.800,112.472)
C1': (45.181,104.385,114.703)
C3': (45.537,103.907,116.974)
O5': (47.530,102.012,116.096)
O4': (46.569,104.541,114.920)
C5': (47.988,103.318,116.462)
P: (48.505,100.755,116.146)
C4': (46.862,104.316,116.331)
C2': (44.729,103.407,115.782)
O2': (43.333,103.475,115.964)
N1: (44.956,103.937,113.321)
O4: (44.201,102.831,109.542)
O2: (43.885,105.905,112.812)
C6: (45.389,102.708,112.879)
C5: (45.175,102.276,111.635)
O3': (44.911,105.052,117.521)
N3: (44.076,104.325,111.207)
OP1: (49.074,100.663,117.512)
OP2: (47.790,99.592,115.573)
C2: (44.278,104.800,112.472)
C1': (45.181,104.385,114.703)
C3': (45.537,103.907,116.974)
O5': (47.530,102.012,116.096)
O4': (46.569,104.541,114.920)
C5': (47.988,103.318,116.462)
P: (48.505,100.755,116.146)
C4': (46.862,104.316,116.331)
C2': (44.729,103.407,115.782)
O2': (43.333,103.475,115.964)
N1: (44.956,103.937,113.321)
O4: (44.201,102.831,109.542)
O2: (43.885,105.905,112.812)
C6: (45.389,102.708,112.879)
C5: (45.175,102.276,111.635)
O3': (44.911,105.052,117.521)
C2: (48.888,104.705,111.316)
OP1: (47.178,99.635,109.865)
OP2: (47.797,97.439,111.042)
C4: (47.239,104.536,109.687)
O5': (48.077,99.650,112.184)
C3': (49.452,101.504,113.810)
C1': (50.264,102.747,111.965)
O4': (50.369,101.373,111.646)
C5': (49.438,99.327,112.493)
P: (47.255,98.820,111.104)
O2: (49.548,105.367,112.133)
C4': (50.183,100.583,112.845)
C2': (50.061,102.856,113.483)
O2': (51.313,103.034,114.111)
N1: (49.187,103.348,111.144)
N3: (47.901,105.266,110.582)
N4: (46.288,105.145,108.975)
C6: (48.492,102.603,110.227)
C5: (47.526,103.152,109.479)
O3': (49.714,101.137,115.162)
OP1: (47.178,99.635,109.865)
OP2: (47.797,97.439,111.042)
C4: (47.239,104.536,109.687)
O5': (48.077,99.650,112.184)
C3': (49.452,101.504,113.810)
C1': (50.264,102.747,111.965)
O4': (50.369,101.373,111.646)
C5': (49.438,99.327,112.493)
P: (47.255,98.820,111.104)
O2: (49.548,105.367,112.133)
C4': (50.183,100.583,112.845)
C2': (50.061,102.856,113.483)
O2': (51.313,103.034,114.111)
N1: (49.187,103.348,111.144)
N3: (47.901,105.266,110.582)
N4: (46.288,105.145,108.975)
C6: (48.492,102.603,110.227)
C5: (47.526,103.152,109.479)
O3': (49.714,101.137,115.162)
Image (generated by PyMOL):