Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQO:0258:0228
Extra
PDB:
ATOM 1 O3' G A 257 78.928 103.998 -0.352 1.00 59.88 O
ATOM 2 P U A 258 77.430 103.941 0.224 1.00 61.23 P
ATOM 3 OP1 U A 258 76.793 102.694 -0.277 1.00 61.62 O
ATOM 4 OP2 U A 258 76.776 105.250 -0.028 1.00 59.46 O
ATOM 5 O5' U A 258 77.655 103.774 1.788 1.00 62.08 O
ATOM 6 C5' U A 258 78.354 102.632 2.301 1.00 64.34 C
ATOM 7 C4' U A 258 78.639 102.811 3.768 1.00 65.92 C
ATOM 8 O4' U A 258 79.697 103.801 3.940 1.00 62.99 O
ATOM 9 C3' U A 258 77.454 103.292 4.609 1.00 68.37 C
ATOM 10 O3' U A 258 77.460 102.632 5.873 1.00 75.85 O
ATOM 11 C2' U A 258 77.762 104.776 4.795 1.00 65.69 C
ATOM 12 O2' U A 258 77.161 105.326 5.954 1.00 66.44 O
ATOM 13 C1' U A 258 79.284 104.730 4.915 1.00 61.68 C
ATOM 14 N1 U A 258 80.047 105.985 4.788 1.00 56.48 N
ATOM 15 C2 U A 258 81.374 105.964 5.194 1.00 53.60 C
ATOM 16 O2 U A 258 81.947 104.948 5.540 1.00 52.66 O
ATOM 17 N3 U A 258 82.007 107.181 5.183 1.00 52.51 N
ATOM 18 C4 U A 258 81.469 108.395 4.813 1.00 52.98 C
ATOM 19 O4 U A 258 82.158 109.416 4.915 1.00 52.50 O
ATOM 20 C5 U A 258 80.117 108.331 4.340 1.00 52.29 C
ATOM 21 C6 U A 258 79.469 107.158 4.337 1.00 54.68 C
ATOM 22 P C A 259 76.120 101.917 6.405 1.00 80.98 P
ATOM 23 OP1 C A 259 74.963 102.833 6.210 1.00 80.08 O
ATOM 24 OP2 C A 259 76.424 101.395 7.761 1.00 81.93 O
ATOM 25 O5' C A 259 75.930 100.665 5.440 1.00 84.66 O
TER
ATOM 1 O3' C B 227 76.786 112.740 4.468 1.00 52.10 O
ATOM 2 P C B 228 78.208 112.392 3.809 1.00 53.04 P
ATOM 3 OP1 C B 228 78.314 113.219 2.582 1.00 57.48 O
ATOM 4 OP2 C B 228 78.369 110.918 3.722 1.00 53.97 O
ATOM 5 O5' C B 228 79.264 112.921 4.880 1.00 52.85 O
ATOM 6 C5' C B 228 80.605 112.409 4.911 1.00 49.89 C
ATOM 7 C4' C B 228 81.216 112.640 6.269 1.00 51.06 C
ATOM 8 O4' C B 228 80.527 111.833 7.264 1.00 50.74 O
ATOM 9 C3' C B 228 82.670 112.217 6.392 1.00 51.55 C
ATOM 10 O3' C B 228 83.528 113.260 5.926 1.00 51.07 O
ATOM 11 C2' C B 228 82.822 111.998 7.892 1.00 50.99 C
ATOM 12 O2' C B 228 83.003 113.209 8.596 1.00 53.37 O
ATOM 13 C1' C B 228 81.453 111.414 8.262 1.00 50.07 C
ATOM 14 N1 C B 228 81.408 109.935 8.390 1.00 47.46 N
ATOM 15 C2 C B 228 82.384 109.280 9.176 1.00 47.59 C
ATOM 16 O2 C B 228 83.242 109.955 9.773 1.00 47.57 O
ATOM 17 N3 C B 228 82.362 107.929 9.266 1.00 46.61 N
ATOM 18 C4 C B 228 81.419 107.231 8.624 1.00 46.80 C
ATOM 19 N4 C B 228 81.456 105.903 8.718 1.00 45.03 N
ATOM 20 C5 C B 228 80.402 107.866 7.849 1.00 45.51 C
ATOM 21 C6 C B 228 80.436 109.205 7.758 1.00 47.48 C
ATOM 22 P A B 229 84.935 112.897 5.249 1.00 50.72 P
ATOM 23 OP1 A B 229 85.740 114.149 5.191 1.00 50.93 O
ATOM 24 OP2 A B 229 84.652 112.140 4.002 1.00 52.41 O
ATOM 25 O5' A B 229 85.633 111.897 6.272 1.00 51.53 O
TER
ATOM 2 P U A 258 77.430 103.941 0.224 1.00 61.23 P
ATOM 3 OP1 U A 258 76.793 102.694 -0.277 1.00 61.62 O
ATOM 4 OP2 U A 258 76.776 105.250 -0.028 1.00 59.46 O
ATOM 5 O5' U A 258 77.655 103.774 1.788 1.00 62.08 O
ATOM 6 C5' U A 258 78.354 102.632 2.301 1.00 64.34 C
ATOM 7 C4' U A 258 78.639 102.811 3.768 1.00 65.92 C
ATOM 8 O4' U A 258 79.697 103.801 3.940 1.00 62.99 O
ATOM 9 C3' U A 258 77.454 103.292 4.609 1.00 68.37 C
ATOM 10 O3' U A 258 77.460 102.632 5.873 1.00 75.85 O
ATOM 11 C2' U A 258 77.762 104.776 4.795 1.00 65.69 C
ATOM 12 O2' U A 258 77.161 105.326 5.954 1.00 66.44 O
ATOM 13 C1' U A 258 79.284 104.730 4.915 1.00 61.68 C
ATOM 14 N1 U A 258 80.047 105.985 4.788 1.00 56.48 N
ATOM 15 C2 U A 258 81.374 105.964 5.194 1.00 53.60 C
ATOM 16 O2 U A 258 81.947 104.948 5.540 1.00 52.66 O
ATOM 17 N3 U A 258 82.007 107.181 5.183 1.00 52.51 N
ATOM 18 C4 U A 258 81.469 108.395 4.813 1.00 52.98 C
ATOM 19 O4 U A 258 82.158 109.416 4.915 1.00 52.50 O
ATOM 20 C5 U A 258 80.117 108.331 4.340 1.00 52.29 C
ATOM 21 C6 U A 258 79.469 107.158 4.337 1.00 54.68 C
ATOM 22 P C A 259 76.120 101.917 6.405 1.00 80.98 P
ATOM 23 OP1 C A 259 74.963 102.833 6.210 1.00 80.08 O
ATOM 24 OP2 C A 259 76.424 101.395 7.761 1.00 81.93 O
ATOM 25 O5' C A 259 75.930 100.665 5.440 1.00 84.66 O
TER
ATOM 1 O3' C B 227 76.786 112.740 4.468 1.00 52.10 O
ATOM 2 P C B 228 78.208 112.392 3.809 1.00 53.04 P
ATOM 3 OP1 C B 228 78.314 113.219 2.582 1.00 57.48 O
ATOM 4 OP2 C B 228 78.369 110.918 3.722 1.00 53.97 O
ATOM 5 O5' C B 228 79.264 112.921 4.880 1.00 52.85 O
ATOM 6 C5' C B 228 80.605 112.409 4.911 1.00 49.89 C
ATOM 7 C4' C B 228 81.216 112.640 6.269 1.00 51.06 C
ATOM 8 O4' C B 228 80.527 111.833 7.264 1.00 50.74 O
ATOM 9 C3' C B 228 82.670 112.217 6.392 1.00 51.55 C
ATOM 10 O3' C B 228 83.528 113.260 5.926 1.00 51.07 O
ATOM 11 C2' C B 228 82.822 111.998 7.892 1.00 50.99 C
ATOM 12 O2' C B 228 83.003 113.209 8.596 1.00 53.37 O
ATOM 13 C1' C B 228 81.453 111.414 8.262 1.00 50.07 C
ATOM 14 N1 C B 228 81.408 109.935 8.390 1.00 47.46 N
ATOM 15 C2 C B 228 82.384 109.280 9.176 1.00 47.59 C
ATOM 16 O2 C B 228 83.242 109.955 9.773 1.00 47.57 O
ATOM 17 N3 C B 228 82.362 107.929 9.266 1.00 46.61 N
ATOM 18 C4 C B 228 81.419 107.231 8.624 1.00 46.80 C
ATOM 19 N4 C B 228 81.456 105.903 8.718 1.00 45.03 N
ATOM 20 C5 C B 228 80.402 107.866 7.849 1.00 45.51 C
ATOM 21 C6 C B 228 80.436 109.205 7.758 1.00 47.48 C
ATOM 22 P A B 229 84.935 112.897 5.249 1.00 50.72 P
ATOM 23 OP1 A B 229 85.740 114.149 5.191 1.00 50.93 O
ATOM 24 OP2 A B 229 84.652 112.140 4.002 1.00 52.41 O
ATOM 25 O5' A B 229 85.633 111.897 6.272 1.00 51.53 O
TER
Atoms:
C4: (81.469,108.395,4.813)
N3: (82.007,107.181,5.183)
OP1: (76.793,102.694,-0.277)
OP2: (76.776,105.250,-0.028)
C2: (81.374,105.964,5.194)
C1': (79.284,104.730,4.915)
C3': (77.454,103.292,4.609)
O5': (77.655,103.774,1.788)
O4': (79.697,103.801,3.940)
C5': (78.354,102.632,2.301)
P: (77.430,103.941,0.224)
C4': (78.639,102.811,3.768)
C2': (77.762,104.776,4.795)
O2': (77.161,105.326,5.954)
N1: (80.047,105.985,4.788)
O4: (82.158,109.416,4.915)
O2: (81.947,104.948,5.540)
C6: (79.469,107.158,4.337)
C5: (80.117,108.331,4.340)
O3': (77.460,102.632,5.873)
N3: (82.007,107.181,5.183)
OP1: (76.793,102.694,-0.277)
OP2: (76.776,105.250,-0.028)
C2: (81.374,105.964,5.194)
C1': (79.284,104.730,4.915)
C3': (77.454,103.292,4.609)
O5': (77.655,103.774,1.788)
O4': (79.697,103.801,3.940)
C5': (78.354,102.632,2.301)
P: (77.430,103.941,0.224)
C4': (78.639,102.811,3.768)
C2': (77.762,104.776,4.795)
O2': (77.161,105.326,5.954)
N1: (80.047,105.985,4.788)
O4: (82.158,109.416,4.915)
O2: (81.947,104.948,5.540)
C6: (79.469,107.158,4.337)
C5: (80.117,108.331,4.340)
O3': (77.460,102.632,5.873)
C2: (82.384,109.280,9.176)
OP1: (78.314,113.219,2.582)
OP2: (78.369,110.918,3.722)
C4: (81.419,107.231,8.624)
O5': (79.264,112.921,4.880)
C3': (82.670,112.217,6.392)
C1': (81.453,111.414,8.262)
O4': (80.527,111.833,7.264)
C5': (80.605,112.409,4.911)
P: (78.208,112.392,3.809)
O2: (83.242,109.955,9.773)
C4': (81.216,112.640,6.269)
C2': (82.822,111.998,7.892)
O2': (83.003,113.209,8.596)
N1: (81.408,109.935,8.390)
N3: (82.362,107.929,9.266)
N4: (81.456,105.903,8.718)
C6: (80.436,109.205,7.758)
C5: (80.402,107.866,7.849)
O3': (83.528,113.260,5.926)
OP1: (78.314,113.219,2.582)
OP2: (78.369,110.918,3.722)
C4: (81.419,107.231,8.624)
O5': (79.264,112.921,4.880)
C3': (82.670,112.217,6.392)
C1': (81.453,111.414,8.262)
O4': (80.527,111.833,7.264)
C5': (80.605,112.409,4.911)
P: (78.208,112.392,3.809)
O2: (83.242,109.955,9.773)
C4': (81.216,112.640,6.269)
C2': (82.822,111.998,7.892)
O2': (83.003,113.209,8.596)
N1: (81.408,109.935,8.390)
N3: (82.362,107.929,9.266)
N4: (81.456,105.903,8.718)
C6: (80.436,109.205,7.758)
C5: (80.402,107.866,7.849)
O3': (83.528,113.260,5.926)
Image (generated by PyMOL):