Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:0272:0273
Extra
PDB:
ATOM 1 O3' U A 271 65.157 104.023 -7.993 1.00134.73 O
ATOM 2 P C A 272 63.734 103.329 -7.704 1.00134.69 P
ATOM 3 OP1 C A 272 63.957 101.858 -7.744 1.00135.06 O
ATOM 4 OP2 C A 272 62.702 103.940 -8.582 1.00134.73 O
ATOM 5 O5' C A 272 63.405 103.737 -6.202 1.00132.59 O
ATOM 6 C5' C A 272 64.088 104.832 -5.574 1.00129.46 C
ATOM 7 C4' C A 272 63.263 106.091 -5.679 1.00126.87 C
ATOM 8 O4' C A 272 63.258 106.577 -7.052 1.00126.80 O
ATOM 9 C3' C A 272 61.796 105.950 -5.269 1.00124.72 C
ATOM 10 O3' C A 272 61.361 107.148 -4.627 1.00120.59 O
ATOM 11 C2' C A 272 61.096 105.853 -6.624 1.00125.52 C
ATOM 12 O2' C A 272 59.733 106.229 -6.581 1.00125.82 O
ATOM 13 C1' C A 272 61.928 106.850 -7.434 1.00126.32 C
ATOM 14 N1 C A 272 61.834 106.850 -8.913 1.00126.30 N
ATOM 15 C2 C A 272 62.689 107.699 -9.647 1.00125.92 C
ATOM 16 O2 C A 272 63.520 108.397 -9.045 1.00125.32 O
ATOM 17 N3 C A 272 62.586 107.733 -10.992 1.00125.96 N
ATOM 18 C4 C A 272 61.692 106.966 -11.615 1.00126.36 C
ATOM 19 N4 C A 272 61.625 107.042 -12.945 1.00126.21 N
ATOM 20 C5 C A 272 60.824 106.088 -10.903 1.00126.47 C
ATOM 21 C6 C A 272 60.928 106.061 -9.568 1.00126.65 C
ATOM 22 P A A 273 62.171 107.732 -3.363 1.00117.54 P
ATOM 23 OP1 A A 273 61.221 107.840 -2.223 1.00117.89 O
ATOM 24 OP2 A A 273 62.889 108.942 -3.839 1.00117.30 O
ATOM 25 O5' A A 273 63.275 106.633 -3.024 1.00113.16 O
TER
ATOM 1 O3' C B 272 61.361 107.148 -4.627 1.00120.59 O
ATOM 2 P A B 273 62.171 107.732 -3.363 1.00117.54 P
ATOM 3 OP1 A B 273 61.221 107.840 -2.223 1.00117.89 O
ATOM 4 OP2 A B 273 62.889 108.942 -3.839 1.00117.30 O
ATOM 5 O5' A B 273 63.275 106.633 -3.024 1.00113.16 O
ATOM 6 C5' A B 273 62.989 105.521 -2.159 1.00106.43 C
ATOM 7 C4' A B 273 64.250 105.087 -1.450 1.00101.83 C
ATOM 8 O4' A B 273 65.242 104.702 -2.441 1.00100.65 O
ATOM 9 C3' A B 273 64.947 106.172 -0.643 1.00 99.29 C
ATOM 10 O3' A B 273 64.362 106.343 0.645 1.00 95.59 O
ATOM 11 C2' A B 273 66.381 105.658 -0.590 1.00 99.01 C
ATOM 12 O2' A B 273 66.570 104.622 0.352 1.00 98.72 O
ATOM 13 C1' A B 273 66.539 105.083 -2.000 1.00 98.62 C
ATOM 14 N9 A B 273 67.090 106.050 -2.954 1.00 96.65 N
ATOM 15 C8 A B 273 66.423 106.743 -3.936 1.00 95.89 C
ATOM 16 N7 A B 273 67.189 107.549 -4.629 1.00 95.18 N
ATOM 17 C5 A B 273 68.447 107.376 -4.069 1.00 94.54 C
ATOM 18 C6 A B 273 69.696 107.954 -4.356 1.00 93.98 C
ATOM 19 N6 A B 273 69.894 108.855 -5.320 1.00 93.36 N
ATOM 20 N1 A B 273 70.751 107.568 -3.607 1.00 94.12 N
ATOM 21 C2 A B 273 70.554 106.664 -2.640 1.00 94.49 C
ATOM 22 N3 A B 273 69.431 106.049 -2.277 1.00 94.66 N
ATOM 23 C4 A B 273 68.401 106.455 -3.039 1.00 95.09 C
ATOM 24 P U B 274 64.173 107.824 1.247 1.00 92.72 P
ATOM 25 OP1 U B 274 63.472 107.695 2.548 1.00 92.71 O
ATOM 26 OP2 U B 274 63.591 108.686 0.184 1.00 91.89 O
ATOM 27 O5' U B 274 65.659 108.324 1.527 1.00 89.22 O
TER
ATOM 2 P C A 272 63.734 103.329 -7.704 1.00134.69 P
ATOM 3 OP1 C A 272 63.957 101.858 -7.744 1.00135.06 O
ATOM 4 OP2 C A 272 62.702 103.940 -8.582 1.00134.73 O
ATOM 5 O5' C A 272 63.405 103.737 -6.202 1.00132.59 O
ATOM 6 C5' C A 272 64.088 104.832 -5.574 1.00129.46 C
ATOM 7 C4' C A 272 63.263 106.091 -5.679 1.00126.87 C
ATOM 8 O4' C A 272 63.258 106.577 -7.052 1.00126.80 O
ATOM 9 C3' C A 272 61.796 105.950 -5.269 1.00124.72 C
ATOM 10 O3' C A 272 61.361 107.148 -4.627 1.00120.59 O
ATOM 11 C2' C A 272 61.096 105.853 -6.624 1.00125.52 C
ATOM 12 O2' C A 272 59.733 106.229 -6.581 1.00125.82 O
ATOM 13 C1' C A 272 61.928 106.850 -7.434 1.00126.32 C
ATOM 14 N1 C A 272 61.834 106.850 -8.913 1.00126.30 N
ATOM 15 C2 C A 272 62.689 107.699 -9.647 1.00125.92 C
ATOM 16 O2 C A 272 63.520 108.397 -9.045 1.00125.32 O
ATOM 17 N3 C A 272 62.586 107.733 -10.992 1.00125.96 N
ATOM 18 C4 C A 272 61.692 106.966 -11.615 1.00126.36 C
ATOM 19 N4 C A 272 61.625 107.042 -12.945 1.00126.21 N
ATOM 20 C5 C A 272 60.824 106.088 -10.903 1.00126.47 C
ATOM 21 C6 C A 272 60.928 106.061 -9.568 1.00126.65 C
ATOM 22 P A A 273 62.171 107.732 -3.363 1.00117.54 P
ATOM 23 OP1 A A 273 61.221 107.840 -2.223 1.00117.89 O
ATOM 24 OP2 A A 273 62.889 108.942 -3.839 1.00117.30 O
ATOM 25 O5' A A 273 63.275 106.633 -3.024 1.00113.16 O
TER
ATOM 1 O3' C B 272 61.361 107.148 -4.627 1.00120.59 O
ATOM 2 P A B 273 62.171 107.732 -3.363 1.00117.54 P
ATOM 3 OP1 A B 273 61.221 107.840 -2.223 1.00117.89 O
ATOM 4 OP2 A B 273 62.889 108.942 -3.839 1.00117.30 O
ATOM 5 O5' A B 273 63.275 106.633 -3.024 1.00113.16 O
ATOM 6 C5' A B 273 62.989 105.521 -2.159 1.00106.43 C
ATOM 7 C4' A B 273 64.250 105.087 -1.450 1.00101.83 C
ATOM 8 O4' A B 273 65.242 104.702 -2.441 1.00100.65 O
ATOM 9 C3' A B 273 64.947 106.172 -0.643 1.00 99.29 C
ATOM 10 O3' A B 273 64.362 106.343 0.645 1.00 95.59 O
ATOM 11 C2' A B 273 66.381 105.658 -0.590 1.00 99.01 C
ATOM 12 O2' A B 273 66.570 104.622 0.352 1.00 98.72 O
ATOM 13 C1' A B 273 66.539 105.083 -2.000 1.00 98.62 C
ATOM 14 N9 A B 273 67.090 106.050 -2.954 1.00 96.65 N
ATOM 15 C8 A B 273 66.423 106.743 -3.936 1.00 95.89 C
ATOM 16 N7 A B 273 67.189 107.549 -4.629 1.00 95.18 N
ATOM 17 C5 A B 273 68.447 107.376 -4.069 1.00 94.54 C
ATOM 18 C6 A B 273 69.696 107.954 -4.356 1.00 93.98 C
ATOM 19 N6 A B 273 69.894 108.855 -5.320 1.00 93.36 N
ATOM 20 N1 A B 273 70.751 107.568 -3.607 1.00 94.12 N
ATOM 21 C2 A B 273 70.554 106.664 -2.640 1.00 94.49 C
ATOM 22 N3 A B 273 69.431 106.049 -2.277 1.00 94.66 N
ATOM 23 C4 A B 273 68.401 106.455 -3.039 1.00 95.09 C
ATOM 24 P U B 274 64.173 107.824 1.247 1.00 92.72 P
ATOM 25 OP1 U B 274 63.472 107.695 2.548 1.00 92.71 O
ATOM 26 OP2 U B 274 63.591 108.686 0.184 1.00 91.89 O
ATOM 27 O5' U B 274 65.659 108.324 1.527 1.00 89.22 O
TER
Atoms:
C2: (62.689,107.699,-9.647)
OP1: (63.957,101.858,-7.744)
OP2: (62.702,103.940,-8.582)
C4: (61.692,106.966,-11.615)
O5': (63.405,103.737,-6.202)
C3': (61.796,105.950,-5.269)
C1': (61.928,106.850,-7.434)
O4': (63.258,106.577,-7.052)
C5': (64.088,104.832,-5.574)
P: (63.734,103.329,-7.704)
O2: (63.520,108.397,-9.045)
C4': (63.263,106.091,-5.679)
C2': (61.096,105.853,-6.624)
O2': (59.733,106.229,-6.581)
N1: (61.834,106.850,-8.913)
N3: (62.586,107.733,-10.992)
N4: (61.625,107.042,-12.945)
C6: (60.928,106.061,-9.568)
C5: (60.824,106.088,-10.903)
O3': (61.361,107.148,-4.627)
OP1: (63.957,101.858,-7.744)
OP2: (62.702,103.940,-8.582)
C4: (61.692,106.966,-11.615)
O5': (63.405,103.737,-6.202)
C3': (61.796,105.950,-5.269)
C1': (61.928,106.850,-7.434)
O4': (63.258,106.577,-7.052)
C5': (64.088,104.832,-5.574)
P: (63.734,103.329,-7.704)
O2: (63.520,108.397,-9.045)
C4': (63.263,106.091,-5.679)
C2': (61.096,105.853,-6.624)
O2': (59.733,106.229,-6.581)
N1: (61.834,106.850,-8.913)
N3: (62.586,107.733,-10.992)
N4: (61.625,107.042,-12.945)
C6: (60.928,106.061,-9.568)
C5: (60.824,106.088,-10.903)
O3': (61.361,107.148,-4.627)
OP1: (61.221,107.840,-2.223)
OP2: (62.889,108.942,-3.839)
C3': (64.947,106.172,-0.643)
C1': (66.539,105.083,-2.000)
C5': (62.989,105.521,-2.159)
O4': (65.242,104.702,-2.441)
C8: (66.423,106.743,-3.936)
O2': (66.570,104.622,0.352)
C6: (69.696,107.954,-4.356)
C5: (68.447,107.376,-4.069)
C4: (68.401,106.455,-3.039)
P: (62.171,107.732,-3.363)
C4': (64.250,105.087,-1.450)
C2': (66.381,105.658,-0.590)
C2: (70.554,106.664,-2.640)
N1: (70.751,107.568,-3.607)
N3: (69.431,106.049,-2.277)
N6: (69.894,108.855,-5.320)
N7: (67.189,107.549,-4.629)
N9: (67.090,106.050,-2.954)
O5': (63.275,106.633,-3.024)
O3': (64.362,106.343,0.645)
OP2: (62.889,108.942,-3.839)
C3': (64.947,106.172,-0.643)
C1': (66.539,105.083,-2.000)
C5': (62.989,105.521,-2.159)
O4': (65.242,104.702,-2.441)
C8: (66.423,106.743,-3.936)
O2': (66.570,104.622,0.352)
C6: (69.696,107.954,-4.356)
C5: (68.447,107.376,-4.069)
C4: (68.401,106.455,-3.039)
P: (62.171,107.732,-3.363)
C4': (64.250,105.087,-1.450)
C2': (66.381,105.658,-0.590)
C2: (70.554,106.664,-2.640)
N1: (70.751,107.568,-3.607)
N3: (69.431,106.049,-2.277)
N6: (69.894,108.855,-5.320)
N7: (67.189,107.549,-4.629)
N9: (67.090,106.050,-2.954)
O5': (63.275,106.633,-3.024)
O3': (64.362,106.343,0.645)
Image (generated by PyMOL):