Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQP:0258:0228
Extra
PDB:
ATOM 1 O3' G A 257 78.718 103.551 -0.231 1.00 57.53 O
ATOM 2 P U A 258 77.199 103.509 0.287 1.00 58.75 P
ATOM 3 OP1 U A 258 76.577 102.258 -0.235 1.00 61.08 O
ATOM 4 OP2 U A 258 76.549 104.816 0.006 1.00 57.76 O
ATOM 5 O5' U A 258 77.370 103.344 1.859 1.00 61.10 O
ATOM 6 C5' U A 258 78.056 102.202 2.398 1.00 62.40 C
ATOM 7 C4' U A 258 78.291 102.379 3.877 1.00 64.12 C
ATOM 8 O4' U A 258 79.377 103.326 4.091 1.00 61.23 O
ATOM 9 C3' U A 258 77.095 102.898 4.681 1.00 66.09 C
ATOM 10 O3' U A 258 77.037 102.242 5.945 1.00 73.78 O
ATOM 11 C2' U A 258 77.443 104.371 4.876 1.00 62.81 C
ATOM 12 O2' U A 258 76.831 104.938 6.019 1.00 60.98 O
ATOM 13 C1' U A 258 78.960 104.283 5.039 1.00 59.48 C
ATOM 14 N1 U A 258 79.760 105.515 4.904 1.00 53.82 N
ATOM 15 C2 U A 258 81.102 105.446 5.260 1.00 51.41 C
ATOM 16 O2 U A 258 81.655 104.411 5.582 1.00 50.26 O
ATOM 17 N3 U A 258 81.773 106.641 5.228 1.00 51.44 N
ATOM 18 C4 U A 258 81.261 107.874 4.887 1.00 51.29 C
ATOM 19 O4 U A 258 81.984 108.869 4.967 1.00 51.70 O
ATOM 20 C5 U A 258 79.891 107.859 4.470 1.00 50.31 C
ATOM 21 C6 U A 258 79.205 106.709 4.487 1.00 51.72 C
ATOM 22 P C A 259 75.645 101.614 6.458 1.00 79.71 P
ATOM 23 OP1 C A 259 74.522 102.511 6.065 1.00 78.30 O
ATOM 24 OP2 C A 259 75.827 101.251 7.887 1.00 79.79 O
ATOM 25 O5' C A 259 75.497 100.261 5.633 1.00 82.87 O
TER
ATOM 1 O3' C B 227 76.588 112.196 4.513 1.00 49.38 O
ATOM 2 P C B 228 78.018 111.831 3.874 1.00 50.00 P
ATOM 3 OP1 C B 228 78.144 112.619 2.624 1.00 54.06 O
ATOM 4 OP2 C B 228 78.187 110.357 3.833 1.00 48.73 O
ATOM 5 O5' C B 228 79.058 112.405 4.937 1.00 48.64 O
ATOM 6 C5' C B 228 80.408 111.933 4.970 1.00 46.92 C
ATOM 7 C4' C B 228 81.009 112.172 6.329 1.00 47.69 C
ATOM 8 O4' C B 228 80.320 111.363 7.319 1.00 48.65 O
ATOM 9 C3' C B 228 82.462 111.752 6.448 1.00 47.76 C
ATOM 10 O3' C B 228 83.310 112.802 5.990 1.00 47.22 O
ATOM 11 C2' C B 228 82.618 111.514 7.944 1.00 48.85 C
ATOM 12 O2' C B 228 82.804 112.717 8.663 1.00 50.07 O
ATOM 13 C1' C B 228 81.246 110.932 8.310 1.00 47.81 C
ATOM 14 N1 C B 228 81.177 109.456 8.441 1.00 46.39 N
ATOM 15 C2 C B 228 82.142 108.786 9.226 1.00 46.54 C
ATOM 16 O2 C B 228 83.023 109.445 9.797 1.00 47.06 O
ATOM 17 N3 C B 228 82.077 107.437 9.345 1.00 46.28 N
ATOM 18 C4 C B 228 81.102 106.758 8.730 1.00 45.81 C
ATOM 19 N4 C B 228 81.083 105.434 8.867 1.00 43.42 N
ATOM 20 C5 C B 228 80.105 107.410 7.942 1.00 45.04 C
ATOM 21 C6 C B 228 80.183 108.743 7.822 1.00 46.55 C
ATOM 22 P A B 229 84.721 112.453 5.314 1.00 48.06 P
ATOM 23 OP1 A B 229 85.506 113.720 5.279 1.00 49.52 O
ATOM 24 OP2 A B 229 84.445 111.719 4.056 1.00 49.46 O
ATOM 25 O5' A B 229 85.420 111.442 6.326 1.00 49.00 O
TER
ATOM 2 P U A 258 77.199 103.509 0.287 1.00 58.75 P
ATOM 3 OP1 U A 258 76.577 102.258 -0.235 1.00 61.08 O
ATOM 4 OP2 U A 258 76.549 104.816 0.006 1.00 57.76 O
ATOM 5 O5' U A 258 77.370 103.344 1.859 1.00 61.10 O
ATOM 6 C5' U A 258 78.056 102.202 2.398 1.00 62.40 C
ATOM 7 C4' U A 258 78.291 102.379 3.877 1.00 64.12 C
ATOM 8 O4' U A 258 79.377 103.326 4.091 1.00 61.23 O
ATOM 9 C3' U A 258 77.095 102.898 4.681 1.00 66.09 C
ATOM 10 O3' U A 258 77.037 102.242 5.945 1.00 73.78 O
ATOM 11 C2' U A 258 77.443 104.371 4.876 1.00 62.81 C
ATOM 12 O2' U A 258 76.831 104.938 6.019 1.00 60.98 O
ATOM 13 C1' U A 258 78.960 104.283 5.039 1.00 59.48 C
ATOM 14 N1 U A 258 79.760 105.515 4.904 1.00 53.82 N
ATOM 15 C2 U A 258 81.102 105.446 5.260 1.00 51.41 C
ATOM 16 O2 U A 258 81.655 104.411 5.582 1.00 50.26 O
ATOM 17 N3 U A 258 81.773 106.641 5.228 1.00 51.44 N
ATOM 18 C4 U A 258 81.261 107.874 4.887 1.00 51.29 C
ATOM 19 O4 U A 258 81.984 108.869 4.967 1.00 51.70 O
ATOM 20 C5 U A 258 79.891 107.859 4.470 1.00 50.31 C
ATOM 21 C6 U A 258 79.205 106.709 4.487 1.00 51.72 C
ATOM 22 P C A 259 75.645 101.614 6.458 1.00 79.71 P
ATOM 23 OP1 C A 259 74.522 102.511 6.065 1.00 78.30 O
ATOM 24 OP2 C A 259 75.827 101.251 7.887 1.00 79.79 O
ATOM 25 O5' C A 259 75.497 100.261 5.633 1.00 82.87 O
TER
ATOM 1 O3' C B 227 76.588 112.196 4.513 1.00 49.38 O
ATOM 2 P C B 228 78.018 111.831 3.874 1.00 50.00 P
ATOM 3 OP1 C B 228 78.144 112.619 2.624 1.00 54.06 O
ATOM 4 OP2 C B 228 78.187 110.357 3.833 1.00 48.73 O
ATOM 5 O5' C B 228 79.058 112.405 4.937 1.00 48.64 O
ATOM 6 C5' C B 228 80.408 111.933 4.970 1.00 46.92 C
ATOM 7 C4' C B 228 81.009 112.172 6.329 1.00 47.69 C
ATOM 8 O4' C B 228 80.320 111.363 7.319 1.00 48.65 O
ATOM 9 C3' C B 228 82.462 111.752 6.448 1.00 47.76 C
ATOM 10 O3' C B 228 83.310 112.802 5.990 1.00 47.22 O
ATOM 11 C2' C B 228 82.618 111.514 7.944 1.00 48.85 C
ATOM 12 O2' C B 228 82.804 112.717 8.663 1.00 50.07 O
ATOM 13 C1' C B 228 81.246 110.932 8.310 1.00 47.81 C
ATOM 14 N1 C B 228 81.177 109.456 8.441 1.00 46.39 N
ATOM 15 C2 C B 228 82.142 108.786 9.226 1.00 46.54 C
ATOM 16 O2 C B 228 83.023 109.445 9.797 1.00 47.06 O
ATOM 17 N3 C B 228 82.077 107.437 9.345 1.00 46.28 N
ATOM 18 C4 C B 228 81.102 106.758 8.730 1.00 45.81 C
ATOM 19 N4 C B 228 81.083 105.434 8.867 1.00 43.42 N
ATOM 20 C5 C B 228 80.105 107.410 7.942 1.00 45.04 C
ATOM 21 C6 C B 228 80.183 108.743 7.822 1.00 46.55 C
ATOM 22 P A B 229 84.721 112.453 5.314 1.00 48.06 P
ATOM 23 OP1 A B 229 85.506 113.720 5.279 1.00 49.52 O
ATOM 24 OP2 A B 229 84.445 111.719 4.056 1.00 49.46 O
ATOM 25 O5' A B 229 85.420 111.442 6.326 1.00 49.00 O
TER
Atoms:
C4: (81.261,107.874,4.887)
N3: (81.773,106.641,5.228)
OP1: (76.577,102.258,-0.235)
OP2: (76.549,104.816,0.006)
C2: (81.102,105.446,5.260)
C1': (78.960,104.283,5.039)
C3': (77.095,102.898,4.681)
O5': (77.370,103.344,1.859)
O4': (79.377,103.326,4.091)
C5': (78.056,102.202,2.398)
P: (77.199,103.509,0.287)
C4': (78.291,102.379,3.877)
C2': (77.443,104.371,4.876)
O2': (76.831,104.938,6.019)
N1: (79.760,105.515,4.904)
O4: (81.984,108.869,4.967)
O2: (81.655,104.411,5.582)
C6: (79.205,106.709,4.487)
C5: (79.891,107.859,4.470)
O3': (77.037,102.242,5.945)
N3: (81.773,106.641,5.228)
OP1: (76.577,102.258,-0.235)
OP2: (76.549,104.816,0.006)
C2: (81.102,105.446,5.260)
C1': (78.960,104.283,5.039)
C3': (77.095,102.898,4.681)
O5': (77.370,103.344,1.859)
O4': (79.377,103.326,4.091)
C5': (78.056,102.202,2.398)
P: (77.199,103.509,0.287)
C4': (78.291,102.379,3.877)
C2': (77.443,104.371,4.876)
O2': (76.831,104.938,6.019)
N1: (79.760,105.515,4.904)
O4: (81.984,108.869,4.967)
O2: (81.655,104.411,5.582)
C6: (79.205,106.709,4.487)
C5: (79.891,107.859,4.470)
O3': (77.037,102.242,5.945)
C2: (82.142,108.786,9.226)
OP1: (78.144,112.619,2.624)
OP2: (78.187,110.357,3.833)
C4: (81.102,106.758,8.730)
O5': (79.058,112.405,4.937)
C3': (82.462,111.752,6.448)
C1': (81.246,110.932,8.310)
O4': (80.320,111.363,7.319)
C5': (80.408,111.933,4.970)
P: (78.018,111.831,3.874)
O2: (83.023,109.445,9.797)
C4': (81.009,112.172,6.329)
C2': (82.618,111.514,7.944)
O2': (82.804,112.717,8.663)
N1: (81.177,109.456,8.441)
N3: (82.077,107.437,9.345)
N4: (81.083,105.434,8.867)
C6: (80.183,108.743,7.822)
C5: (80.105,107.410,7.942)
O3': (83.310,112.802,5.990)
OP1: (78.144,112.619,2.624)
OP2: (78.187,110.357,3.833)
C4: (81.102,106.758,8.730)
O5': (79.058,112.405,4.937)
C3': (82.462,111.752,6.448)
C1': (81.246,110.932,8.310)
O4': (80.320,111.363,7.319)
C5': (80.408,111.933,4.970)
P: (78.018,111.831,3.874)
O2: (83.023,109.445,9.797)
C4': (81.009,112.172,6.329)
C2': (82.618,111.514,7.944)
O2': (82.804,112.717,8.663)
N1: (81.177,109.456,8.441)
N3: (82.077,107.437,9.345)
N4: (81.083,105.434,8.867)
C6: (80.183,108.743,7.822)
C5: (80.105,107.410,7.942)
O3': (83.310,112.802,5.990)
Image (generated by PyMOL):