Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2OTJ:0272:0273
Extra
PDB:
ATOM 1 O3' U A 271 64.640 103.678 -8.193 1.00138.52 O
ATOM 2 P C A 272 63.175 103.035 -8.024 1.00138.12 P
ATOM 3 OP1 C A 272 63.371 101.567 -7.874 1.00138.12 O
ATOM 4 OP2 C A 272 62.290 103.555 -9.102 1.00138.13 O
ATOM 5 O5' C A 272 62.663 103.617 -6.633 1.00136.64 O
ATOM 6 C5' C A 272 63.503 104.481 -5.849 1.00134.45 C
ATOM 7 C4' C A 272 62.928 105.875 -5.820 1.00132.68 C
ATOM 8 O4' C A 272 63.045 106.499 -7.132 1.00132.96 O
ATOM 9 C3' C A 272 61.450 105.945 -5.448 1.00131.25 C
ATOM 10 O3' C A 272 61.211 107.169 -4.764 1.00127.97 O
ATOM 11 C2' C A 272 60.785 106.019 -6.820 1.00131.94 C
ATOM 12 O2' C A 272 59.489 106.584 -6.798 1.00132.01 O
ATOM 13 C1' C A 272 61.767 106.931 -7.553 1.00132.83 C
ATOM 14 N1 C A 272 61.704 106.913 -9.027 1.00133.52 N
ATOM 15 C2 C A 272 62.519 107.802 -9.750 1.00133.74 C
ATOM 16 O2 C A 272 63.295 108.550 -9.133 1.00133.74 O
ATOM 17 N3 C A 272 62.439 107.820 -11.100 1.00133.93 N
ATOM 18 C4 C A 272 61.597 106.997 -11.730 1.00134.05 C
ATOM 19 N4 C A 272 61.542 107.061 -13.063 1.00134.07 N
ATOM 20 C5 C A 272 60.772 106.073 -11.022 1.00133.87 C
ATOM 21 C6 C A 272 60.857 106.064 -9.685 1.00133.66 C
ATOM 22 P A A 273 61.940 107.461 -3.362 1.00125.42 P
ATOM 23 OP1 A A 273 60.927 107.315 -2.283 1.00125.21 O
ATOM 24 OP2 A A 273 62.673 108.746 -3.517 1.00125.34 O
ATOM 25 O5' A A 273 63.022 106.297 -3.220 1.00122.58 O
TER
ATOM 1 O3' C B 272 61.211 107.169 -4.764 1.00127.97 O
ATOM 2 P A B 273 61.940 107.461 -3.362 1.00125.42 P
ATOM 3 OP1 A B 273 60.927 107.315 -2.283 1.00125.21 O
ATOM 4 OP2 A B 273 62.673 108.746 -3.517 1.00125.34 O
ATOM 5 O5' A B 273 63.022 106.297 -3.220 1.00122.58 O
ATOM 6 C5' A B 273 62.778 105.150 -2.384 1.00117.95 C
ATOM 7 C4' A B 273 64.045 104.753 -1.657 1.00114.56 C
ATOM 8 O4' A B 273 65.060 104.385 -2.631 1.00113.58 O
ATOM 9 C3' A B 273 64.711 105.844 -0.829 1.00112.58 C
ATOM 10 O3' A B 273 64.112 106.001 0.458 1.00109.90 O
ATOM 11 C2' A B 273 66.147 105.342 -0.745 1.00112.33 C
ATOM 12 O2' A B 273 66.309 104.315 0.213 1.00112.21 O
ATOM 13 C1' A B 273 66.344 104.760 -2.149 1.00112.22 C
ATOM 14 N9 A B 273 66.933 105.716 -3.091 1.00111.12 N
ATOM 15 C8 A B 273 66.334 106.320 -4.169 1.00110.65 C
ATOM 16 N7 A B 273 67.121 107.142 -4.821 1.00110.07 N
ATOM 17 C5 A B 273 68.321 107.074 -4.129 1.00109.68 C
ATOM 18 C6 A B 273 69.562 107.715 -4.316 1.00109.32 C
ATOM 19 N6 A B 273 69.811 108.587 -5.297 1.00108.91 N
ATOM 20 N1 A B 273 70.553 107.427 -3.445 1.00109.39 N
ATOM 21 C2 A B 273 70.306 106.554 -2.459 1.00109.39 C
ATOM 22 N3 A B 273 69.187 105.889 -2.180 1.00109.67 N
ATOM 23 C4 A B 273 68.221 106.197 -3.062 1.00110.12 C
ATOM 24 P U B 274 63.862 107.481 1.053 1.00108.12 P
ATOM 25 OP1 U B 274 63.133 107.348 2.344 1.00107.78 O
ATOM 26 OP2 U B 274 63.282 108.318 -0.036 1.00107.66 O
ATOM 27 O5' U B 274 65.321 108.039 1.372 1.00106.22 O
TER
ATOM 2 P C A 272 63.175 103.035 -8.024 1.00138.12 P
ATOM 3 OP1 C A 272 63.371 101.567 -7.874 1.00138.12 O
ATOM 4 OP2 C A 272 62.290 103.555 -9.102 1.00138.13 O
ATOM 5 O5' C A 272 62.663 103.617 -6.633 1.00136.64 O
ATOM 6 C5' C A 272 63.503 104.481 -5.849 1.00134.45 C
ATOM 7 C4' C A 272 62.928 105.875 -5.820 1.00132.68 C
ATOM 8 O4' C A 272 63.045 106.499 -7.132 1.00132.96 O
ATOM 9 C3' C A 272 61.450 105.945 -5.448 1.00131.25 C
ATOM 10 O3' C A 272 61.211 107.169 -4.764 1.00127.97 O
ATOM 11 C2' C A 272 60.785 106.019 -6.820 1.00131.94 C
ATOM 12 O2' C A 272 59.489 106.584 -6.798 1.00132.01 O
ATOM 13 C1' C A 272 61.767 106.931 -7.553 1.00132.83 C
ATOM 14 N1 C A 272 61.704 106.913 -9.027 1.00133.52 N
ATOM 15 C2 C A 272 62.519 107.802 -9.750 1.00133.74 C
ATOM 16 O2 C A 272 63.295 108.550 -9.133 1.00133.74 O
ATOM 17 N3 C A 272 62.439 107.820 -11.100 1.00133.93 N
ATOM 18 C4 C A 272 61.597 106.997 -11.730 1.00134.05 C
ATOM 19 N4 C A 272 61.542 107.061 -13.063 1.00134.07 N
ATOM 20 C5 C A 272 60.772 106.073 -11.022 1.00133.87 C
ATOM 21 C6 C A 272 60.857 106.064 -9.685 1.00133.66 C
ATOM 22 P A A 273 61.940 107.461 -3.362 1.00125.42 P
ATOM 23 OP1 A A 273 60.927 107.315 -2.283 1.00125.21 O
ATOM 24 OP2 A A 273 62.673 108.746 -3.517 1.00125.34 O
ATOM 25 O5' A A 273 63.022 106.297 -3.220 1.00122.58 O
TER
ATOM 1 O3' C B 272 61.211 107.169 -4.764 1.00127.97 O
ATOM 2 P A B 273 61.940 107.461 -3.362 1.00125.42 P
ATOM 3 OP1 A B 273 60.927 107.315 -2.283 1.00125.21 O
ATOM 4 OP2 A B 273 62.673 108.746 -3.517 1.00125.34 O
ATOM 5 O5' A B 273 63.022 106.297 -3.220 1.00122.58 O
ATOM 6 C5' A B 273 62.778 105.150 -2.384 1.00117.95 C
ATOM 7 C4' A B 273 64.045 104.753 -1.657 1.00114.56 C
ATOM 8 O4' A B 273 65.060 104.385 -2.631 1.00113.58 O
ATOM 9 C3' A B 273 64.711 105.844 -0.829 1.00112.58 C
ATOM 10 O3' A B 273 64.112 106.001 0.458 1.00109.90 O
ATOM 11 C2' A B 273 66.147 105.342 -0.745 1.00112.33 C
ATOM 12 O2' A B 273 66.309 104.315 0.213 1.00112.21 O
ATOM 13 C1' A B 273 66.344 104.760 -2.149 1.00112.22 C
ATOM 14 N9 A B 273 66.933 105.716 -3.091 1.00111.12 N
ATOM 15 C8 A B 273 66.334 106.320 -4.169 1.00110.65 C
ATOM 16 N7 A B 273 67.121 107.142 -4.821 1.00110.07 N
ATOM 17 C5 A B 273 68.321 107.074 -4.129 1.00109.68 C
ATOM 18 C6 A B 273 69.562 107.715 -4.316 1.00109.32 C
ATOM 19 N6 A B 273 69.811 108.587 -5.297 1.00108.91 N
ATOM 20 N1 A B 273 70.553 107.427 -3.445 1.00109.39 N
ATOM 21 C2 A B 273 70.306 106.554 -2.459 1.00109.39 C
ATOM 22 N3 A B 273 69.187 105.889 -2.180 1.00109.67 N
ATOM 23 C4 A B 273 68.221 106.197 -3.062 1.00110.12 C
ATOM 24 P U B 274 63.862 107.481 1.053 1.00108.12 P
ATOM 25 OP1 U B 274 63.133 107.348 2.344 1.00107.78 O
ATOM 26 OP2 U B 274 63.282 108.318 -0.036 1.00107.66 O
ATOM 27 O5' U B 274 65.321 108.039 1.372 1.00106.22 O
TER
Atoms:
C2: (62.519,107.802,-9.750)
OP1: (63.371,101.567,-7.874)
OP2: (62.290,103.555,-9.102)
C4: (61.597,106.997,-11.730)
O5': (62.663,103.617,-6.633)
C3': (61.450,105.945,-5.448)
C1': (61.767,106.931,-7.553)
O4': (63.045,106.499,-7.132)
C5': (63.503,104.481,-5.849)
P: (63.175,103.035,-8.024)
O2: (63.295,108.550,-9.133)
C4': (62.928,105.875,-5.820)
C2': (60.785,106.019,-6.820)
O2': (59.489,106.584,-6.798)
N1: (61.704,106.913,-9.027)
N3: (62.439,107.820,-11.100)
N4: (61.542,107.061,-13.063)
C6: (60.857,106.064,-9.685)
C5: (60.772,106.073,-11.022)
O3': (61.211,107.169,-4.764)
OP1: (63.371,101.567,-7.874)
OP2: (62.290,103.555,-9.102)
C4: (61.597,106.997,-11.730)
O5': (62.663,103.617,-6.633)
C3': (61.450,105.945,-5.448)
C1': (61.767,106.931,-7.553)
O4': (63.045,106.499,-7.132)
C5': (63.503,104.481,-5.849)
P: (63.175,103.035,-8.024)
O2: (63.295,108.550,-9.133)
C4': (62.928,105.875,-5.820)
C2': (60.785,106.019,-6.820)
O2': (59.489,106.584,-6.798)
N1: (61.704,106.913,-9.027)
N3: (62.439,107.820,-11.100)
N4: (61.542,107.061,-13.063)
C6: (60.857,106.064,-9.685)
C5: (60.772,106.073,-11.022)
O3': (61.211,107.169,-4.764)
OP1: (60.927,107.315,-2.283)
OP2: (62.673,108.746,-3.517)
C3': (64.711,105.844,-0.829)
C1': (66.344,104.760,-2.149)
C5': (62.778,105.150,-2.384)
O4': (65.060,104.385,-2.631)
C8: (66.334,106.320,-4.169)
O2': (66.309,104.315,0.213)
C6: (69.562,107.715,-4.316)
C5: (68.321,107.074,-4.129)
C4: (68.221,106.197,-3.062)
P: (61.940,107.461,-3.362)
C4': (64.045,104.753,-1.657)
C2': (66.147,105.342,-0.745)
C2: (70.306,106.554,-2.459)
N1: (70.553,107.427,-3.445)
N3: (69.187,105.889,-2.180)
N6: (69.811,108.587,-5.297)
N7: (67.121,107.142,-4.821)
N9: (66.933,105.716,-3.091)
O5': (63.022,106.297,-3.220)
O3': (64.112,106.001,0.458)
OP2: (62.673,108.746,-3.517)
C3': (64.711,105.844,-0.829)
C1': (66.344,104.760,-2.149)
C5': (62.778,105.150,-2.384)
O4': (65.060,104.385,-2.631)
C8: (66.334,106.320,-4.169)
O2': (66.309,104.315,0.213)
C6: (69.562,107.715,-4.316)
C5: (68.321,107.074,-4.129)
C4: (68.221,106.197,-3.062)
P: (61.940,107.461,-3.362)
C4': (64.045,104.753,-1.657)
C2': (66.147,105.342,-0.745)
C2: (70.306,106.554,-2.459)
N1: (70.553,107.427,-3.445)
N3: (69.187,105.889,-2.180)
N6: (69.811,108.587,-5.297)
N7: (67.121,107.142,-4.821)
N9: (66.933,105.716,-3.091)
O5': (63.022,106.297,-3.220)
O3': (64.112,106.001,0.458)
Image (generated by PyMOL):