ClaRNA

Doublet info:

Details

Nucleotide types: CA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2QA4:0272:0273

Extra

PDB:
ATOM 1 O3' U A 271 65.832 104.845 -7.272 1.00185.76 O
ATOM 2 P C A 272 64.504 103.954 -7.085 1.00185.97 P
ATOM 3 OP1 C A 272 64.947 102.544 -6.923 1.00185.92 O
ATOM 4 OP2 C A 272 63.530 104.299 -8.155 1.00186.09 O
ATOM 5 O5' C A 272 63.906 104.455 -5.697 1.00185.39 O
ATOM 6 C5' C A 272 64.669 105.318 -4.830 1.00184.30 C
ATOM 7 C4' C A 272 63.957 106.639 -4.647 1.00183.14 C
ATOM 8 O4' C A 272 64.000 107.396 -5.890 1.00183.17 O
ATOM 9 C3' C A 272 62.483 106.532 -4.269 1.00182.23 C
ATOM 10 O3' C A 272 62.118 107.655 -3.468 1.00180.52 O
ATOM 11 C2' C A 272 61.801 106.626 -5.632 1.00182.39 C
ATOM 12 O2' C A 272 60.455 107.054 -5.572 1.00182.18 O
ATOM 13 C1' C A 272 62.682 107.665 -6.325 1.00182.62 C
ATOM 14 N1 C A 272 62.665 107.626 -7.799 1.00182.17 N
ATOM 15 C2 C A 272 63.420 108.572 -8.509 1.00181.94 C
ATOM 16 O2 C A 272 64.082 109.414 -7.879 1.00181.66 O
ATOM 17 N3 C A 272 63.407 108.545 -9.860 1.00181.82 N
ATOM 18 C4 C A 272 62.680 107.628 -10.503 1.00181.62 C
ATOM 19 N4 C A 272 62.691 107.644 -11.836 1.00181.62 N
ATOM 20 C5 C A 272 61.907 106.655 -9.807 1.00181.50 C
ATOM 21 C6 C A 272 61.927 106.690 -8.469 1.00181.72 C
ATOM 22 P A A 273 62.912 107.962 -2.101 1.00179.21 P
ATOM 23 OP1 A A 273 61.924 108.018 -0.991 1.00179.27 O
ATOM 24 OP2 A A 273 63.797 109.134 -2.361 1.00179.14 O
ATOM 25 O5' A A 273 63.833 106.682 -1.873 1.00176.84 O
TER

ATOM 1 O3' C B 272 62.118 107.655 -3.468 1.00180.52 O
ATOM 2 P A B 273 62.912 107.962 -2.101 1.00179.21 P
ATOM 3 OP1 A B 273 61.924 108.018 -0.991 1.00179.27 O
ATOM 4 OP2 A B 273 63.797 109.134 -2.361 1.00179.14 O
ATOM 5 O5' A B 273 63.833 106.682 -1.873 1.00176.84 O
ATOM 6 C5' A B 273 63.576 105.756 -0.797 1.00172.61 C
ATOM 7 C4' A B 273 64.860 105.449 -0.062 1.00169.68 C
ATOM 8 O4' A B 273 65.847 104.981 -1.022 1.00169.27 O
ATOM 9 C3' A B 273 65.524 106.646 0.603 1.00167.84 C
ATOM 10 O3' A B 273 64.973 106.905 1.897 1.00164.18 O
ATOM 11 C2' A B 273 66.985 106.214 0.653 1.00168.16 C
ATOM 12 O2' A B 273 67.246 105.290 1.688 1.00167.98 O
ATOM 13 C1' A B 273 67.126 105.493 -0.689 1.00168.81 C
ATOM 14 N9 A B 273 67.560 106.372 -1.778 1.00169.38 N
ATOM 15 C8 A B 273 66.862 106.709 -2.913 1.00169.38 C
ATOM 16 N7 A B 273 67.510 107.522 -3.712 1.00169.48 N
ATOM 17 C5 A B 273 68.717 107.736 -3.062 1.00169.93 C
ATOM 18 C6 A B 273 69.846 108.507 -3.395 1.00170.20 C
ATOM 19 N6 A B 273 69.947 109.228 -4.516 1.00170.18 N
ATOM 20 N1 A B 273 70.882 108.510 -2.526 1.00170.64 N
ATOM 21 C2 A B 273 70.781 107.780 -1.406 1.00170.67 C
ATOM 22 N3 A B 273 69.775 107.013 -0.985 1.00170.47 N
ATOM 23 C4 A B 273 68.762 107.034 -1.869 1.00169.94 C
ATOM 24 P U B 274 64.796 108.424 2.408 1.00161.22 P
ATOM 25 OP1 U B 274 64.303 108.392 3.808 1.00160.95 O
ATOM 26 OP2 U B 274 64.027 109.164 1.376 1.00160.93 O
ATOM 27 O5' U B 274 66.278 109.003 2.430 1.00158.65 O
TER

Atoms:
C2: (63.420,108.572,-8.509)
OP1: (64.947,102.544,-6.923)
OP2: (63.530,104.299,-8.155)
C4: (62.680,107.628,-10.503)
O5': (63.906,104.455,-5.697)
C3': (62.483,106.532,-4.269)
C1': (62.682,107.665,-6.325)
O4': (64.000,107.396,-5.890)
C5': (64.669,105.318,-4.830)
P: (64.504,103.954,-7.085)
O2: (64.082,109.414,-7.879)
C4': (63.957,106.639,-4.647)
C2': (61.801,106.626,-5.632)
O2': (60.455,107.054,-5.572)
N1: (62.665,107.626,-7.799)
N3: (63.407,108.545,-9.860)
N4: (62.691,107.644,-11.836)
C6: (61.927,106.690,-8.469)
C5: (61.907,106.655,-9.807)
O3': (62.118,107.655,-3.468)
OP1: (61.924,108.018,-0.991)
OP2: (63.797,109.134,-2.361)
C3': (65.524,106.646,0.603)
C1': (67.126,105.493,-0.689)
C5': (63.576,105.756,-0.797)
O4': (65.847,104.981,-1.022)
C8: (66.862,106.709,-2.913)
O2': (67.246,105.290,1.688)
C6: (69.846,108.507,-3.395)
C5: (68.717,107.736,-3.062)
C4: (68.762,107.034,-1.869)
P: (62.912,107.962,-2.101)
C4': (64.860,105.449,-0.062)
C2': (66.985,106.214,0.653)
C2: (70.781,107.780,-1.406)
N1: (70.882,108.510,-2.526)
N3: (69.775,107.013,-0.985)
N6: (69.947,109.228,-4.516)
N7: (67.510,107.522,-3.712)
N9: (67.560,106.372,-1.778)
O5': (63.833,106.682,-1.873)
O3': (64.973,106.905,1.897)
Image (generated by PyMOL):
PyMOL image
show in jmol