Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YHQ:01087:01086
Extra
PDB:
ATOM 1 O3' C A1086 49.742 100.843 115.006 1.00 37.90 O
ATOM 2 P U A1087 48.549 100.564 116.046 1.00 37.14 P
ATOM 3 OP1 U A1087 49.126 100.605 117.409 1.00 37.57 O
ATOM 4 OP2 U A1087 47.827 99.350 115.594 1.00 34.97 O
ATOM 5 O5' U A1087 47.584 101.819 115.888 1.00 35.74 O
ATOM 6 C5' U A1087 48.022 103.120 116.268 1.00 34.86 C
ATOM 7 C4' U A1087 46.908 104.122 116.105 1.00 36.78 C
ATOM 8 O4' U A1087 46.612 104.292 114.690 1.00 37.35 O
ATOM 9 C3' U A1087 45.582 103.791 116.785 1.00 36.94 C
ATOM 10 O3' U A1087 45.043 104.980 117.339 1.00 37.94 O
ATOM 11 C2' U A1087 44.712 103.322 115.620 1.00 37.22 C
ATOM 12 O2' U A1087 43.332 103.530 115.842 1.00 38.43 O
ATOM 13 C1' U A1087 45.217 104.225 114.497 1.00 34.70 C
ATOM 14 N1 U A1087 44.953 103.753 113.129 1.00 32.01 N
ATOM 15 C2 U A1087 44.246 104.597 112.281 1.00 31.36 C
ATOM 16 O2 U A1087 43.831 105.694 112.619 1.00 33.19 O
ATOM 17 N3 U A1087 44.040 104.108 111.020 1.00 29.78 N
ATOM 18 C4 U A1087 44.449 102.894 110.523 1.00 30.94 C
ATOM 19 O4 U A1087 44.174 102.600 109.361 1.00 31.77 O
ATOM 20 C5 U A1087 45.168 102.074 111.455 1.00 30.95 C
ATOM 21 C6 U A1087 45.390 102.521 112.694 1.00 32.21 C
ATOM 22 P C A1088 45.114 105.215 118.929 1.00 42.20 P
ATOM 23 OP1 C A1088 44.585 106.585 119.210 1.00 39.57 O
ATOM 24 OP2 C A1088 46.487 104.848 119.379 1.00 41.69 O
ATOM 25 O5' C A1088 44.113 104.123 119.527 1.00 40.69 O
TER
ATOM 1 O3' C B1085 45.683 98.539 111.631 1.00 40.03 O
ATOM 2 P C B1086 47.158 98.555 110.991 1.00 41.98 P
ATOM 3 OP1 C B1086 47.104 99.387 109.767 1.00 43.25 O
ATOM 4 OP2 C B1086 47.661 97.152 110.904 1.00 39.66 O
ATOM 5 O5' C B1086 48.017 99.361 112.061 1.00 39.90 O
ATOM 6 C5' C B1086 49.392 99.036 112.322 1.00 37.04 C
ATOM 7 C4' C B1086 50.151 100.288 112.670 1.00 36.91 C
ATOM 8 O4' C B1086 50.326 101.081 111.473 1.00 35.98 O
ATOM 9 C3' C B1086 49.449 101.212 113.655 1.00 37.56 C
ATOM 10 O3' C B1086 49.742 100.843 115.006 1.00 37.90 O
ATOM 11 C2' C B1086 50.051 102.568 113.320 1.00 36.63 C
ATOM 12 O2' C B1086 51.298 102.760 113.952 1.00 40.89 O
ATOM 13 C1' C B1086 50.253 102.456 111.803 1.00 36.37 C
ATOM 14 N1 C B1086 49.201 103.087 110.980 1.00 34.85 N
ATOM 15 C2 C B1086 48.993 104.465 111.096 1.00 34.03 C
ATOM 16 O2 C B1086 49.722 105.123 111.857 1.00 38.18 O
ATOM 17 N3 C B1086 48.015 105.050 110.369 1.00 32.00 N
ATOM 18 C4 C B1086 47.280 104.322 109.534 1.00 30.14 C
ATOM 19 N4 C B1086 46.338 104.948 108.839 1.00 28.80 N
ATOM 20 C5 C B1086 47.482 102.920 109.377 1.00 31.76 C
ATOM 21 C6 C B1086 48.439 102.347 110.116 1.00 32.88 C
ATOM 22 P U B1087 48.549 100.564 116.046 1.00 37.14 P
ATOM 23 OP1 U B1087 49.126 100.605 117.409 1.00 37.57 O
ATOM 24 OP2 U B1087 47.827 99.350 115.594 1.00 34.97 O
ATOM 25 O5' U B1087 47.584 101.819 115.888 1.00 35.74 O
TER
ATOM 2 P U A1087 48.549 100.564 116.046 1.00 37.14 P
ATOM 3 OP1 U A1087 49.126 100.605 117.409 1.00 37.57 O
ATOM 4 OP2 U A1087 47.827 99.350 115.594 1.00 34.97 O
ATOM 5 O5' U A1087 47.584 101.819 115.888 1.00 35.74 O
ATOM 6 C5' U A1087 48.022 103.120 116.268 1.00 34.86 C
ATOM 7 C4' U A1087 46.908 104.122 116.105 1.00 36.78 C
ATOM 8 O4' U A1087 46.612 104.292 114.690 1.00 37.35 O
ATOM 9 C3' U A1087 45.582 103.791 116.785 1.00 36.94 C
ATOM 10 O3' U A1087 45.043 104.980 117.339 1.00 37.94 O
ATOM 11 C2' U A1087 44.712 103.322 115.620 1.00 37.22 C
ATOM 12 O2' U A1087 43.332 103.530 115.842 1.00 38.43 O
ATOM 13 C1' U A1087 45.217 104.225 114.497 1.00 34.70 C
ATOM 14 N1 U A1087 44.953 103.753 113.129 1.00 32.01 N
ATOM 15 C2 U A1087 44.246 104.597 112.281 1.00 31.36 C
ATOM 16 O2 U A1087 43.831 105.694 112.619 1.00 33.19 O
ATOM 17 N3 U A1087 44.040 104.108 111.020 1.00 29.78 N
ATOM 18 C4 U A1087 44.449 102.894 110.523 1.00 30.94 C
ATOM 19 O4 U A1087 44.174 102.600 109.361 1.00 31.77 O
ATOM 20 C5 U A1087 45.168 102.074 111.455 1.00 30.95 C
ATOM 21 C6 U A1087 45.390 102.521 112.694 1.00 32.21 C
ATOM 22 P C A1088 45.114 105.215 118.929 1.00 42.20 P
ATOM 23 OP1 C A1088 44.585 106.585 119.210 1.00 39.57 O
ATOM 24 OP2 C A1088 46.487 104.848 119.379 1.00 41.69 O
ATOM 25 O5' C A1088 44.113 104.123 119.527 1.00 40.69 O
TER
ATOM 1 O3' C B1085 45.683 98.539 111.631 1.00 40.03 O
ATOM 2 P C B1086 47.158 98.555 110.991 1.00 41.98 P
ATOM 3 OP1 C B1086 47.104 99.387 109.767 1.00 43.25 O
ATOM 4 OP2 C B1086 47.661 97.152 110.904 1.00 39.66 O
ATOM 5 O5' C B1086 48.017 99.361 112.061 1.00 39.90 O
ATOM 6 C5' C B1086 49.392 99.036 112.322 1.00 37.04 C
ATOM 7 C4' C B1086 50.151 100.288 112.670 1.00 36.91 C
ATOM 8 O4' C B1086 50.326 101.081 111.473 1.00 35.98 O
ATOM 9 C3' C B1086 49.449 101.212 113.655 1.00 37.56 C
ATOM 10 O3' C B1086 49.742 100.843 115.006 1.00 37.90 O
ATOM 11 C2' C B1086 50.051 102.568 113.320 1.00 36.63 C
ATOM 12 O2' C B1086 51.298 102.760 113.952 1.00 40.89 O
ATOM 13 C1' C B1086 50.253 102.456 111.803 1.00 36.37 C
ATOM 14 N1 C B1086 49.201 103.087 110.980 1.00 34.85 N
ATOM 15 C2 C B1086 48.993 104.465 111.096 1.00 34.03 C
ATOM 16 O2 C B1086 49.722 105.123 111.857 1.00 38.18 O
ATOM 17 N3 C B1086 48.015 105.050 110.369 1.00 32.00 N
ATOM 18 C4 C B1086 47.280 104.322 109.534 1.00 30.14 C
ATOM 19 N4 C B1086 46.338 104.948 108.839 1.00 28.80 N
ATOM 20 C5 C B1086 47.482 102.920 109.377 1.00 31.76 C
ATOM 21 C6 C B1086 48.439 102.347 110.116 1.00 32.88 C
ATOM 22 P U B1087 48.549 100.564 116.046 1.00 37.14 P
ATOM 23 OP1 U B1087 49.126 100.605 117.409 1.00 37.57 O
ATOM 24 OP2 U B1087 47.827 99.350 115.594 1.00 34.97 O
ATOM 25 O5' U B1087 47.584 101.819 115.888 1.00 35.74 O
TER
Atoms:
C4: (44.449,102.894,110.523)
N3: (44.040,104.108,111.020)
OP1: (49.126,100.605,117.409)
OP2: (47.827,99.350,115.594)
C2: (44.246,104.597,112.281)
C1': (45.217,104.225,114.497)
C3': (45.582,103.791,116.785)
O5': (47.584,101.819,115.888)
O4': (46.612,104.292,114.690)
C5': (48.022,103.120,116.268)
P: (48.549,100.564,116.046)
C4': (46.908,104.122,116.105)
C2': (44.712,103.322,115.620)
O2': (43.332,103.530,115.842)
N1: (44.953,103.753,113.129)
O4: (44.174,102.600,109.361)
O2: (43.831,105.694,112.619)
C6: (45.390,102.521,112.694)
C5: (45.168,102.074,111.455)
O3': (45.043,104.980,117.339)
N3: (44.040,104.108,111.020)
OP1: (49.126,100.605,117.409)
OP2: (47.827,99.350,115.594)
C2: (44.246,104.597,112.281)
C1': (45.217,104.225,114.497)
C3': (45.582,103.791,116.785)
O5': (47.584,101.819,115.888)
O4': (46.612,104.292,114.690)
C5': (48.022,103.120,116.268)
P: (48.549,100.564,116.046)
C4': (46.908,104.122,116.105)
C2': (44.712,103.322,115.620)
O2': (43.332,103.530,115.842)
N1: (44.953,103.753,113.129)
O4: (44.174,102.600,109.361)
O2: (43.831,105.694,112.619)
C6: (45.390,102.521,112.694)
C5: (45.168,102.074,111.455)
O3': (45.043,104.980,117.339)
C2: (48.993,104.465,111.096)
OP1: (47.104,99.387,109.767)
OP2: (47.661,97.152,110.904)
C4: (47.280,104.322,109.534)
O5': (48.017,99.361,112.061)
C3': (49.449,101.212,113.655)
C1': (50.253,102.456,111.803)
O4': (50.326,101.081,111.473)
C5': (49.392,99.036,112.322)
P: (47.158,98.555,110.991)
O2: (49.722,105.123,111.857)
C4': (50.151,100.288,112.670)
C2': (50.051,102.568,113.320)
O2': (51.298,102.760,113.952)
N1: (49.201,103.087,110.980)
N3: (48.015,105.050,110.369)
N4: (46.338,104.948,108.839)
C6: (48.439,102.347,110.116)
C5: (47.482,102.920,109.377)
O3': (49.742,100.843,115.006)
OP1: (47.104,99.387,109.767)
OP2: (47.661,97.152,110.904)
C4: (47.280,104.322,109.534)
O5': (48.017,99.361,112.061)
C3': (49.449,101.212,113.655)
C1': (50.253,102.456,111.803)
O4': (50.326,101.081,111.473)
C5': (49.392,99.036,112.322)
P: (47.158,98.555,110.991)
O2: (49.722,105.123,111.857)
C4': (50.151,100.288,112.670)
C2': (50.051,102.568,113.320)
O2': (51.298,102.760,113.952)
N1: (49.201,103.087,110.980)
N3: (48.015,105.050,110.369)
N4: (46.338,104.948,108.839)
C6: (48.439,102.347,110.116)
C5: (47.482,102.920,109.377)
O3': (49.742,100.843,115.006)
Image (generated by PyMOL):