Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YI2:01087:01086
Extra
PDB:
ATOM 1 O3' C A1086 49.723 101.350 115.027 1.00 42.51 O
ATOM 2 P U A1087 48.555 101.024 116.086 1.00 44.28 P
ATOM 3 OP1 U A1087 49.169 101.027 117.433 1.00 42.65 O
ATOM 4 OP2 U A1087 47.823 99.810 115.613 1.00 41.83 O
ATOM 5 O5' U A1087 47.587 102.282 116.000 1.00 41.41 O
ATOM 6 C5' U A1087 48.063 103.583 116.339 1.00 40.99 C
ATOM 7 C4' U A1087 46.985 104.606 116.111 1.00 42.74 C
ATOM 8 O4' U A1087 46.715 104.702 114.683 1.00 44.29 O
ATOM 9 C3' U A1087 45.643 104.306 116.776 1.00 43.36 C
ATOM 10 O3' U A1087 45.071 105.513 117.238 1.00 43.92 O
ATOM 11 C2' U A1087 44.804 103.781 115.618 1.00 44.43 C
ATOM 12 O2' U A1087 43.421 103.973 115.816 1.00 45.28 O
ATOM 13 C1' U A1087 45.320 104.657 114.482 1.00 43.72 C
ATOM 14 N1 U A1087 45.042 104.201 113.111 1.00 42.61 N
ATOM 15 C2 U A1087 44.492 105.126 112.241 1.00 42.33 C
ATOM 16 O2 U A1087 44.237 106.274 112.567 1.00 43.98 O
ATOM 17 N3 U A1087 44.249 104.663 110.974 1.00 41.53 N
ATOM 18 C4 U A1087 44.489 103.397 110.494 1.00 41.52 C
ATOM 19 O4 U A1087 44.228 103.142 109.318 1.00 40.84 O
ATOM 20 C5 U A1087 45.055 102.490 111.451 1.00 42.93 C
ATOM 21 C6 U A1087 45.308 102.914 112.697 1.00 43.04 C
ATOM 22 P C A1088 45.117 105.854 118.803 1.00 48.63 P
ATOM 23 OP1 C A1088 44.548 107.223 118.993 1.00 46.54 O
ATOM 24 OP2 C A1088 46.497 105.557 119.279 1.00 46.92 O
ATOM 25 O5' C A1088 44.139 104.774 119.455 1.00 47.98 O
TER
ATOM 1 O3' C B1085 45.638 99.180 111.721 1.00 46.18 O
ATOM 2 P C B1086 47.084 99.153 111.021 1.00 47.88 P
ATOM 3 OP1 C B1086 46.990 99.937 109.763 1.00 48.07 O
ATOM 4 OP2 C B1086 47.559 97.743 110.975 1.00 45.61 O
ATOM 5 O5' C B1086 47.986 99.986 112.032 1.00 46.00 O
ATOM 6 C5' C B1086 49.356 99.653 112.269 1.00 42.50 C
ATOM 7 C4' C B1086 50.107 100.893 112.669 1.00 42.95 C
ATOM 8 O4' C B1086 50.280 101.735 111.506 1.00 41.20 O
ATOM 9 C3' C B1086 49.401 101.770 113.696 1.00 41.57 C
ATOM 10 O3' C B1086 49.723 101.350 115.027 1.00 42.51 O
ATOM 11 C2' C B1086 49.984 103.149 113.411 1.00 40.72 C
ATOM 12 O2' C B1086 51.210 103.359 114.074 1.00 41.95 O
ATOM 13 C1' C B1086 50.208 103.094 111.892 1.00 40.46 C
ATOM 14 N1 C B1086 49.168 103.754 111.076 1.00 40.59 N
ATOM 15 C2 C B1086 48.972 105.137 111.209 1.00 39.53 C
ATOM 16 O2 C B1086 49.687 105.775 111.995 1.00 39.51 O
ATOM 17 N3 C B1086 48.014 105.740 110.472 1.00 37.98 N
ATOM 18 C4 C B1086 47.284 105.025 109.617 1.00 36.54 C
ATOM 19 N4 C B1086 46.369 105.664 108.898 1.00 38.51 N
ATOM 20 C5 C B1086 47.465 103.624 109.458 1.00 36.80 C
ATOM 21 C6 C B1086 48.403 103.033 110.200 1.00 37.47 C
ATOM 22 P U B1087 48.555 101.024 116.086 1.00 44.28 P
ATOM 23 OP1 U B1087 49.169 101.027 117.433 1.00 42.65 O
ATOM 24 OP2 U B1087 47.823 99.810 115.613 1.00 41.83 O
ATOM 25 O5' U B1087 47.587 102.282 116.000 1.00 41.41 O
TER
ATOM 2 P U A1087 48.555 101.024 116.086 1.00 44.28 P
ATOM 3 OP1 U A1087 49.169 101.027 117.433 1.00 42.65 O
ATOM 4 OP2 U A1087 47.823 99.810 115.613 1.00 41.83 O
ATOM 5 O5' U A1087 47.587 102.282 116.000 1.00 41.41 O
ATOM 6 C5' U A1087 48.063 103.583 116.339 1.00 40.99 C
ATOM 7 C4' U A1087 46.985 104.606 116.111 1.00 42.74 C
ATOM 8 O4' U A1087 46.715 104.702 114.683 1.00 44.29 O
ATOM 9 C3' U A1087 45.643 104.306 116.776 1.00 43.36 C
ATOM 10 O3' U A1087 45.071 105.513 117.238 1.00 43.92 O
ATOM 11 C2' U A1087 44.804 103.781 115.618 1.00 44.43 C
ATOM 12 O2' U A1087 43.421 103.973 115.816 1.00 45.28 O
ATOM 13 C1' U A1087 45.320 104.657 114.482 1.00 43.72 C
ATOM 14 N1 U A1087 45.042 104.201 113.111 1.00 42.61 N
ATOM 15 C2 U A1087 44.492 105.126 112.241 1.00 42.33 C
ATOM 16 O2 U A1087 44.237 106.274 112.567 1.00 43.98 O
ATOM 17 N3 U A1087 44.249 104.663 110.974 1.00 41.53 N
ATOM 18 C4 U A1087 44.489 103.397 110.494 1.00 41.52 C
ATOM 19 O4 U A1087 44.228 103.142 109.318 1.00 40.84 O
ATOM 20 C5 U A1087 45.055 102.490 111.451 1.00 42.93 C
ATOM 21 C6 U A1087 45.308 102.914 112.697 1.00 43.04 C
ATOM 22 P C A1088 45.117 105.854 118.803 1.00 48.63 P
ATOM 23 OP1 C A1088 44.548 107.223 118.993 1.00 46.54 O
ATOM 24 OP2 C A1088 46.497 105.557 119.279 1.00 46.92 O
ATOM 25 O5' C A1088 44.139 104.774 119.455 1.00 47.98 O
TER
ATOM 1 O3' C B1085 45.638 99.180 111.721 1.00 46.18 O
ATOM 2 P C B1086 47.084 99.153 111.021 1.00 47.88 P
ATOM 3 OP1 C B1086 46.990 99.937 109.763 1.00 48.07 O
ATOM 4 OP2 C B1086 47.559 97.743 110.975 1.00 45.61 O
ATOM 5 O5' C B1086 47.986 99.986 112.032 1.00 46.00 O
ATOM 6 C5' C B1086 49.356 99.653 112.269 1.00 42.50 C
ATOM 7 C4' C B1086 50.107 100.893 112.669 1.00 42.95 C
ATOM 8 O4' C B1086 50.280 101.735 111.506 1.00 41.20 O
ATOM 9 C3' C B1086 49.401 101.770 113.696 1.00 41.57 C
ATOM 10 O3' C B1086 49.723 101.350 115.027 1.00 42.51 O
ATOM 11 C2' C B1086 49.984 103.149 113.411 1.00 40.72 C
ATOM 12 O2' C B1086 51.210 103.359 114.074 1.00 41.95 O
ATOM 13 C1' C B1086 50.208 103.094 111.892 1.00 40.46 C
ATOM 14 N1 C B1086 49.168 103.754 111.076 1.00 40.59 N
ATOM 15 C2 C B1086 48.972 105.137 111.209 1.00 39.53 C
ATOM 16 O2 C B1086 49.687 105.775 111.995 1.00 39.51 O
ATOM 17 N3 C B1086 48.014 105.740 110.472 1.00 37.98 N
ATOM 18 C4 C B1086 47.284 105.025 109.617 1.00 36.54 C
ATOM 19 N4 C B1086 46.369 105.664 108.898 1.00 38.51 N
ATOM 20 C5 C B1086 47.465 103.624 109.458 1.00 36.80 C
ATOM 21 C6 C B1086 48.403 103.033 110.200 1.00 37.47 C
ATOM 22 P U B1087 48.555 101.024 116.086 1.00 44.28 P
ATOM 23 OP1 U B1087 49.169 101.027 117.433 1.00 42.65 O
ATOM 24 OP2 U B1087 47.823 99.810 115.613 1.00 41.83 O
ATOM 25 O5' U B1087 47.587 102.282 116.000 1.00 41.41 O
TER
Atoms:
C4: (44.489,103.397,110.494)
N3: (44.249,104.663,110.974)
OP1: (49.169,101.027,117.433)
OP2: (47.823,99.810,115.613)
C2: (44.492,105.126,112.241)
C1': (45.320,104.657,114.482)
C3': (45.643,104.306,116.776)
O5': (47.587,102.282,116.000)
O4': (46.715,104.702,114.683)
C5': (48.063,103.583,116.339)
P: (48.555,101.024,116.086)
C4': (46.985,104.606,116.111)
C2': (44.804,103.781,115.618)
O2': (43.421,103.973,115.816)
N1: (45.042,104.201,113.111)
O4: (44.228,103.142,109.318)
O2: (44.237,106.274,112.567)
C6: (45.308,102.914,112.697)
C5: (45.055,102.490,111.451)
O3': (45.071,105.513,117.238)
N3: (44.249,104.663,110.974)
OP1: (49.169,101.027,117.433)
OP2: (47.823,99.810,115.613)
C2: (44.492,105.126,112.241)
C1': (45.320,104.657,114.482)
C3': (45.643,104.306,116.776)
O5': (47.587,102.282,116.000)
O4': (46.715,104.702,114.683)
C5': (48.063,103.583,116.339)
P: (48.555,101.024,116.086)
C4': (46.985,104.606,116.111)
C2': (44.804,103.781,115.618)
O2': (43.421,103.973,115.816)
N1: (45.042,104.201,113.111)
O4: (44.228,103.142,109.318)
O2: (44.237,106.274,112.567)
C6: (45.308,102.914,112.697)
C5: (45.055,102.490,111.451)
O3': (45.071,105.513,117.238)
C2: (48.972,105.137,111.209)
OP1: (46.990,99.937,109.763)
OP2: (47.559,97.743,110.975)
C4: (47.284,105.025,109.617)
O5': (47.986,99.986,112.032)
C3': (49.401,101.770,113.696)
C1': (50.208,103.094,111.892)
O4': (50.280,101.735,111.506)
C5': (49.356,99.653,112.269)
P: (47.084,99.153,111.021)
O2: (49.687,105.775,111.995)
C4': (50.107,100.893,112.669)
C2': (49.984,103.149,113.411)
O2': (51.210,103.359,114.074)
N1: (49.168,103.754,111.076)
N3: (48.014,105.740,110.472)
N4: (46.369,105.664,108.898)
C6: (48.403,103.033,110.200)
C5: (47.465,103.624,109.458)
O3': (49.723,101.350,115.027)
OP1: (46.990,99.937,109.763)
OP2: (47.559,97.743,110.975)
C4: (47.284,105.025,109.617)
O5': (47.986,99.986,112.032)
C3': (49.401,101.770,113.696)
C1': (50.208,103.094,111.892)
O4': (50.280,101.735,111.506)
C5': (49.356,99.653,112.269)
P: (47.084,99.153,111.021)
O2: (49.687,105.775,111.995)
C4': (50.107,100.893,112.669)
C2': (49.984,103.149,113.411)
O2': (51.210,103.359,114.074)
N1: (49.168,103.754,111.076)
N3: (48.014,105.740,110.472)
N4: (46.369,105.664,108.898)
C6: (48.403,103.033,110.200)
C5: (47.465,103.624,109.458)
O3': (49.723,101.350,115.027)
Image (generated by PyMOL):