Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YI2:0258:0228
Extra
PDB:
ATOM 1 O3' G A 257 79.412 104.300 -0.009 1.00 60.52 O
ATOM 2 P U A 258 77.933 104.230 0.614 1.00 60.87 P
ATOM 3 OP1 U A 258 77.290 102.983 0.125 1.00 61.32 O
ATOM 4 OP2 U A 258 77.259 105.537 0.391 1.00 59.19 O
ATOM 5 O5' U A 258 78.216 104.052 2.170 1.00 62.00 O
ATOM 6 C5' U A 258 78.934 102.902 2.657 1.00 62.67 C
ATOM 7 C4' U A 258 79.202 103.035 4.139 1.00 63.56 C
ATOM 8 O4' U A 258 80.272 104.002 4.373 1.00 60.92 O
ATOM 9 C3' U A 258 78.011 103.505 4.974 1.00 63.87 C
ATOM 10 O3' U A 258 78.040 102.863 6.249 1.00 67.72 O
ATOM 11 C2' U A 258 78.307 104.994 5.140 1.00 61.62 C
ATOM 12 O2' U A 258 77.674 105.571 6.266 1.00 63.34 O
ATOM 13 C1' U A 258 79.826 104.955 5.307 1.00 58.26 C
ATOM 14 N1 U A 258 80.593 106.206 5.159 1.00 53.89 N
ATOM 15 C2 U A 258 81.925 106.184 5.544 1.00 51.55 C
ATOM 16 O2 U A 258 82.504 105.169 5.888 1.00 50.07 O
ATOM 17 N3 U A 258 82.560 107.398 5.507 1.00 50.56 N
ATOM 18 C4 U A 258 82.025 108.610 5.121 1.00 51.69 C
ATOM 19 O4 U A 258 82.670 109.643 5.328 1.00 50.82 O
ATOM 20 C5 U A 258 80.664 108.544 4.672 1.00 50.91 C
ATOM 21 C6 U A 258 80.012 107.375 4.702 1.00 52.94 C
ATOM 22 P C A 259 76.680 102.290 6.891 1.00 69.77 P
ATOM 23 OP1 C A 259 75.571 103.259 6.709 1.00 68.37 O
ATOM 24 OP2 C A 259 77.044 101.835 8.258 1.00 70.85 O
ATOM 25 O5' C A 259 76.337 101.008 6.012 1.00 72.47 O
TER
ATOM 1 O3' C B 227 77.313 112.940 4.637 1.00 56.20 O
ATOM 2 P C B 228 78.750 112.580 4.008 1.00 57.84 P
ATOM 3 OP1 C B 228 78.877 113.397 2.773 1.00 58.82 O
ATOM 4 OP2 C B 228 78.916 111.103 3.931 1.00 57.92 O
ATOM 5 O5' C B 228 79.779 113.125 5.095 1.00 56.32 O
ATOM 6 C5' C B 228 81.149 112.700 5.096 1.00 53.46 C
ATOM 7 C4' C B 228 81.765 112.942 6.450 1.00 52.65 C
ATOM 8 O4' C B 228 81.078 112.147 7.452 1.00 51.05 O
ATOM 9 C3' C B 228 83.222 112.532 6.570 1.00 52.92 C
ATOM 10 O3' C B 228 84.057 113.591 6.094 1.00 54.08 O
ATOM 11 C2' C B 228 83.380 112.308 8.073 1.00 52.32 C
ATOM 12 O2' C B 228 83.598 113.500 8.807 1.00 54.73 O
ATOM 13 C1' C B 228 82.002 111.747 8.456 1.00 50.62 C
ATOM 14 N1 C B 228 81.922 110.277 8.640 1.00 47.12 N
ATOM 15 C2 C B 228 82.914 109.612 9.415 1.00 47.47 C
ATOM 16 O2 C B 228 83.809 110.276 9.967 1.00 46.54 O
ATOM 17 N3 C B 228 82.859 108.265 9.540 1.00 46.23 N
ATOM 18 C4 C B 228 81.877 107.579 8.946 1.00 46.38 C
ATOM 19 N4 C B 228 81.888 106.252 9.061 1.00 44.51 N
ATOM 20 C5 C B 228 80.846 108.224 8.194 1.00 45.71 C
ATOM 21 C6 C B 228 80.908 109.558 8.067 1.00 45.72 C
ATOM 22 P A B 229 85.428 113.261 5.315 1.00 54.46 P
ATOM 23 OP1 A B 229 86.175 114.542 5.219 1.00 54.01 O
ATOM 24 OP2 A B 229 85.089 112.514 4.079 1.00 53.88 O
ATOM 25 O5' A B 229 86.241 112.305 6.295 1.00 52.27 O
TER
ATOM 2 P U A 258 77.933 104.230 0.614 1.00 60.87 P
ATOM 3 OP1 U A 258 77.290 102.983 0.125 1.00 61.32 O
ATOM 4 OP2 U A 258 77.259 105.537 0.391 1.00 59.19 O
ATOM 5 O5' U A 258 78.216 104.052 2.170 1.00 62.00 O
ATOM 6 C5' U A 258 78.934 102.902 2.657 1.00 62.67 C
ATOM 7 C4' U A 258 79.202 103.035 4.139 1.00 63.56 C
ATOM 8 O4' U A 258 80.272 104.002 4.373 1.00 60.92 O
ATOM 9 C3' U A 258 78.011 103.505 4.974 1.00 63.87 C
ATOM 10 O3' U A 258 78.040 102.863 6.249 1.00 67.72 O
ATOM 11 C2' U A 258 78.307 104.994 5.140 1.00 61.62 C
ATOM 12 O2' U A 258 77.674 105.571 6.266 1.00 63.34 O
ATOM 13 C1' U A 258 79.826 104.955 5.307 1.00 58.26 C
ATOM 14 N1 U A 258 80.593 106.206 5.159 1.00 53.89 N
ATOM 15 C2 U A 258 81.925 106.184 5.544 1.00 51.55 C
ATOM 16 O2 U A 258 82.504 105.169 5.888 1.00 50.07 O
ATOM 17 N3 U A 258 82.560 107.398 5.507 1.00 50.56 N
ATOM 18 C4 U A 258 82.025 108.610 5.121 1.00 51.69 C
ATOM 19 O4 U A 258 82.670 109.643 5.328 1.00 50.82 O
ATOM 20 C5 U A 258 80.664 108.544 4.672 1.00 50.91 C
ATOM 21 C6 U A 258 80.012 107.375 4.702 1.00 52.94 C
ATOM 22 P C A 259 76.680 102.290 6.891 1.00 69.77 P
ATOM 23 OP1 C A 259 75.571 103.259 6.709 1.00 68.37 O
ATOM 24 OP2 C A 259 77.044 101.835 8.258 1.00 70.85 O
ATOM 25 O5' C A 259 76.337 101.008 6.012 1.00 72.47 O
TER
ATOM 1 O3' C B 227 77.313 112.940 4.637 1.00 56.20 O
ATOM 2 P C B 228 78.750 112.580 4.008 1.00 57.84 P
ATOM 3 OP1 C B 228 78.877 113.397 2.773 1.00 58.82 O
ATOM 4 OP2 C B 228 78.916 111.103 3.931 1.00 57.92 O
ATOM 5 O5' C B 228 79.779 113.125 5.095 1.00 56.32 O
ATOM 6 C5' C B 228 81.149 112.700 5.096 1.00 53.46 C
ATOM 7 C4' C B 228 81.765 112.942 6.450 1.00 52.65 C
ATOM 8 O4' C B 228 81.078 112.147 7.452 1.00 51.05 O
ATOM 9 C3' C B 228 83.222 112.532 6.570 1.00 52.92 C
ATOM 10 O3' C B 228 84.057 113.591 6.094 1.00 54.08 O
ATOM 11 C2' C B 228 83.380 112.308 8.073 1.00 52.32 C
ATOM 12 O2' C B 228 83.598 113.500 8.807 1.00 54.73 O
ATOM 13 C1' C B 228 82.002 111.747 8.456 1.00 50.62 C
ATOM 14 N1 C B 228 81.922 110.277 8.640 1.00 47.12 N
ATOM 15 C2 C B 228 82.914 109.612 9.415 1.00 47.47 C
ATOM 16 O2 C B 228 83.809 110.276 9.967 1.00 46.54 O
ATOM 17 N3 C B 228 82.859 108.265 9.540 1.00 46.23 N
ATOM 18 C4 C B 228 81.877 107.579 8.946 1.00 46.38 C
ATOM 19 N4 C B 228 81.888 106.252 9.061 1.00 44.51 N
ATOM 20 C5 C B 228 80.846 108.224 8.194 1.00 45.71 C
ATOM 21 C6 C B 228 80.908 109.558 8.067 1.00 45.72 C
ATOM 22 P A B 229 85.428 113.261 5.315 1.00 54.46 P
ATOM 23 OP1 A B 229 86.175 114.542 5.219 1.00 54.01 O
ATOM 24 OP2 A B 229 85.089 112.514 4.079 1.00 53.88 O
ATOM 25 O5' A B 229 86.241 112.305 6.295 1.00 52.27 O
TER
Atoms:
C4: (82.025,108.610,5.121)
N3: (82.560,107.398,5.507)
OP1: (77.290,102.983,0.125)
OP2: (77.259,105.537,0.391)
C2: (81.925,106.184,5.544)
C1': (79.826,104.955,5.307)
C3': (78.011,103.505,4.974)
O5': (78.216,104.052,2.170)
O4': (80.272,104.002,4.373)
C5': (78.934,102.902,2.657)
P: (77.933,104.230,0.614)
C4': (79.202,103.035,4.139)
C2': (78.307,104.994,5.140)
O2': (77.674,105.571,6.266)
N1: (80.593,106.206,5.159)
O4: (82.670,109.643,5.328)
O2: (82.504,105.169,5.888)
C6: (80.012,107.375,4.702)
C5: (80.664,108.544,4.672)
O3': (78.040,102.863,6.249)
N3: (82.560,107.398,5.507)
OP1: (77.290,102.983,0.125)
OP2: (77.259,105.537,0.391)
C2: (81.925,106.184,5.544)
C1': (79.826,104.955,5.307)
C3': (78.011,103.505,4.974)
O5': (78.216,104.052,2.170)
O4': (80.272,104.002,4.373)
C5': (78.934,102.902,2.657)
P: (77.933,104.230,0.614)
C4': (79.202,103.035,4.139)
C2': (78.307,104.994,5.140)
O2': (77.674,105.571,6.266)
N1: (80.593,106.206,5.159)
O4: (82.670,109.643,5.328)
O2: (82.504,105.169,5.888)
C6: (80.012,107.375,4.702)
C5: (80.664,108.544,4.672)
O3': (78.040,102.863,6.249)
C2: (82.914,109.612,9.415)
OP1: (78.877,113.397,2.773)
OP2: (78.916,111.103,3.931)
C4: (81.877,107.579,8.946)
O5': (79.779,113.125,5.095)
C3': (83.222,112.532,6.570)
C1': (82.002,111.747,8.456)
O4': (81.078,112.147,7.452)
C5': (81.149,112.700,5.096)
P: (78.750,112.580,4.008)
O2: (83.809,110.276,9.967)
C4': (81.765,112.942,6.450)
C2': (83.380,112.308,8.073)
O2': (83.598,113.500,8.807)
N1: (81.922,110.277,8.640)
N3: (82.859,108.265,9.540)
N4: (81.888,106.252,9.061)
C6: (80.908,109.558,8.067)
C5: (80.846,108.224,8.194)
O3': (84.057,113.591,6.094)
OP1: (78.877,113.397,2.773)
OP2: (78.916,111.103,3.931)
C4: (81.877,107.579,8.946)
O5': (79.779,113.125,5.095)
C3': (83.222,112.532,6.570)
C1': (82.002,111.747,8.456)
O4': (81.078,112.147,7.452)
C5': (81.149,112.700,5.096)
P: (78.750,112.580,4.008)
O2: (83.809,110.276,9.967)
C4': (81.765,112.942,6.450)
C2': (83.380,112.308,8.073)
O2': (83.598,113.500,8.807)
N1: (81.922,110.277,8.640)
N3: (82.859,108.265,9.540)
N4: (81.888,106.252,9.061)
C6: (80.908,109.558,8.067)
C5: (80.846,108.224,8.194)
O3': (84.057,113.591,6.094)
Image (generated by PyMOL):