Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:02688:02746
Extra
PDB:
ATOM 1 O3' G A2687 32.036 182.630 122.839 1.00 61.72 O
ATOM 2 P U A2688 30.496 182.845 123.242 1.00 62.50 P
ATOM 3 OP1 U A2688 30.173 181.951 124.388 1.00 60.82 O
ATOM 4 OP2 U A2688 29.671 182.778 122.008 1.00 60.93 O
ATOM 5 O5' U A2688 30.486 184.357 123.746 1.00 64.54 O
ATOM 6 C5' U A2688 31.157 184.741 124.967 1.00 67.98 C
ATOM 7 C4' U A2688 31.430 186.230 124.975 1.00 71.29 C
ATOM 8 O4' U A2688 32.578 186.535 124.131 1.00 70.67 O
ATOM 9 C3' U A2688 30.285 187.110 124.475 1.00 73.63 C
ATOM 10 O3' U A2688 30.240 188.328 125.203 1.00 77.75 O
ATOM 11 C2' U A2688 30.689 187.388 123.031 1.00 73.10 C
ATOM 12 O2' U A2688 30.141 188.570 122.477 1.00 73.12 O
ATOM 13 C1' U A2688 32.205 187.498 123.166 1.00 71.26 C
ATOM 14 N1 U A2688 32.903 187.208 121.909 1.00 69.17 N
ATOM 15 C2 U A2688 33.692 188.201 121.371 1.00 68.78 C
ATOM 16 O2 U A2688 33.861 189.284 121.912 1.00 67.44 O
ATOM 17 N3 U A2688 34.283 187.881 120.173 1.00 68.90 N
ATOM 18 C4 U A2688 34.169 186.691 119.483 1.00 68.50 C
ATOM 19 O4 U A2688 34.746 186.557 118.407 1.00 68.47 O
ATOM 20 C5 U A2688 33.349 185.713 120.116 1.00 69.60 C
ATOM 21 C6 U A2688 32.761 185.995 121.279 1.00 69.57 C
ATOM 22 P C A2689 28.911 188.717 126.015 1.00 80.70 P
ATOM 23 OP1 C A2689 27.815 187.785 125.619 1.00 80.46 O
ATOM 24 OP2 C A2689 28.721 190.182 125.847 1.00 80.54 O
ATOM 25 O5' C A2689 29.304 188.427 127.533 1.00 80.08 O
TER
ATOM 1 O3' A B2745 33.580 182.709 116.191 1.00 61.05 O
ATOM 2 P C B2746 32.132 182.699 116.884 1.00 63.89 P
ATOM 3 OP1 C B2746 32.267 183.109 118.305 1.00 63.55 O
ATOM 4 OP2 C B2746 31.487 181.404 116.556 1.00 62.53 O
ATOM 5 O5' C B2746 31.358 183.871 116.133 1.00 66.19 O
ATOM 6 C5' C B2746 31.618 185.253 116.458 1.00 69.05 C
ATOM 7 C4' C B2746 31.634 186.089 115.201 1.00 71.58 C
ATOM 8 O4' C B2746 32.740 185.672 114.359 1.00 71.94 O
ATOM 9 C3' C B2746 30.409 185.954 114.310 1.00 73.06 C
ATOM 10 O3' C B2746 29.346 186.797 114.764 1.00 75.12 O
ATOM 11 C2' C B2746 30.955 186.368 112.948 1.00 72.86 C
ATOM 12 O2' C B2746 31.070 187.767 112.797 1.00 73.97 O
ATOM 13 C1' C B2746 32.365 185.775 112.996 1.00 72.20 C
ATOM 14 N1 C B2746 32.478 184.444 112.372 1.00 72.10 N
ATOM 15 C2 C B2746 32.620 184.360 110.980 1.00 71.90 C
ATOM 16 O2 C B2746 32.640 185.405 110.310 1.00 73.62 O
ATOM 17 N3 C B2746 32.728 183.142 110.399 1.00 71.45 N
ATOM 18 C4 C B2746 32.697 182.039 111.149 1.00 70.96 C
ATOM 19 N4 C B2746 32.799 180.861 110.530 1.00 69.91 N
ATOM 20 C5 C B2746 32.556 182.094 112.566 1.00 71.34 C
ATOM 21 C6 C B2746 32.450 183.304 113.131 1.00 72.17 C
ATOM 22 P A B2747 27.838 186.236 114.803 1.00 76.90 P
ATOM 23 OP1 A B2747 26.956 187.354 115.224 1.00 77.48 O
ATOM 24 OP2 A B2747 27.802 184.957 115.554 1.00 76.44 O
ATOM 25 O5' A B2747 27.525 185.910 113.281 1.00 78.14 O
TER
ATOM 2 P U A2688 30.496 182.845 123.242 1.00 62.50 P
ATOM 3 OP1 U A2688 30.173 181.951 124.388 1.00 60.82 O
ATOM 4 OP2 U A2688 29.671 182.778 122.008 1.00 60.93 O
ATOM 5 O5' U A2688 30.486 184.357 123.746 1.00 64.54 O
ATOM 6 C5' U A2688 31.157 184.741 124.967 1.00 67.98 C
ATOM 7 C4' U A2688 31.430 186.230 124.975 1.00 71.29 C
ATOM 8 O4' U A2688 32.578 186.535 124.131 1.00 70.67 O
ATOM 9 C3' U A2688 30.285 187.110 124.475 1.00 73.63 C
ATOM 10 O3' U A2688 30.240 188.328 125.203 1.00 77.75 O
ATOM 11 C2' U A2688 30.689 187.388 123.031 1.00 73.10 C
ATOM 12 O2' U A2688 30.141 188.570 122.477 1.00 73.12 O
ATOM 13 C1' U A2688 32.205 187.498 123.166 1.00 71.26 C
ATOM 14 N1 U A2688 32.903 187.208 121.909 1.00 69.17 N
ATOM 15 C2 U A2688 33.692 188.201 121.371 1.00 68.78 C
ATOM 16 O2 U A2688 33.861 189.284 121.912 1.00 67.44 O
ATOM 17 N3 U A2688 34.283 187.881 120.173 1.00 68.90 N
ATOM 18 C4 U A2688 34.169 186.691 119.483 1.00 68.50 C
ATOM 19 O4 U A2688 34.746 186.557 118.407 1.00 68.47 O
ATOM 20 C5 U A2688 33.349 185.713 120.116 1.00 69.60 C
ATOM 21 C6 U A2688 32.761 185.995 121.279 1.00 69.57 C
ATOM 22 P C A2689 28.911 188.717 126.015 1.00 80.70 P
ATOM 23 OP1 C A2689 27.815 187.785 125.619 1.00 80.46 O
ATOM 24 OP2 C A2689 28.721 190.182 125.847 1.00 80.54 O
ATOM 25 O5' C A2689 29.304 188.427 127.533 1.00 80.08 O
TER
ATOM 1 O3' A B2745 33.580 182.709 116.191 1.00 61.05 O
ATOM 2 P C B2746 32.132 182.699 116.884 1.00 63.89 P
ATOM 3 OP1 C B2746 32.267 183.109 118.305 1.00 63.55 O
ATOM 4 OP2 C B2746 31.487 181.404 116.556 1.00 62.53 O
ATOM 5 O5' C B2746 31.358 183.871 116.133 1.00 66.19 O
ATOM 6 C5' C B2746 31.618 185.253 116.458 1.00 69.05 C
ATOM 7 C4' C B2746 31.634 186.089 115.201 1.00 71.58 C
ATOM 8 O4' C B2746 32.740 185.672 114.359 1.00 71.94 O
ATOM 9 C3' C B2746 30.409 185.954 114.310 1.00 73.06 C
ATOM 10 O3' C B2746 29.346 186.797 114.764 1.00 75.12 O
ATOM 11 C2' C B2746 30.955 186.368 112.948 1.00 72.86 C
ATOM 12 O2' C B2746 31.070 187.767 112.797 1.00 73.97 O
ATOM 13 C1' C B2746 32.365 185.775 112.996 1.00 72.20 C
ATOM 14 N1 C B2746 32.478 184.444 112.372 1.00 72.10 N
ATOM 15 C2 C B2746 32.620 184.360 110.980 1.00 71.90 C
ATOM 16 O2 C B2746 32.640 185.405 110.310 1.00 73.62 O
ATOM 17 N3 C B2746 32.728 183.142 110.399 1.00 71.45 N
ATOM 18 C4 C B2746 32.697 182.039 111.149 1.00 70.96 C
ATOM 19 N4 C B2746 32.799 180.861 110.530 1.00 69.91 N
ATOM 20 C5 C B2746 32.556 182.094 112.566 1.00 71.34 C
ATOM 21 C6 C B2746 32.450 183.304 113.131 1.00 72.17 C
ATOM 22 P A B2747 27.838 186.236 114.803 1.00 76.90 P
ATOM 23 OP1 A B2747 26.956 187.354 115.224 1.00 77.48 O
ATOM 24 OP2 A B2747 27.802 184.957 115.554 1.00 76.44 O
ATOM 25 O5' A B2747 27.525 185.910 113.281 1.00 78.14 O
TER
Atoms:
C4: (34.169,186.691,119.483)
N3: (34.283,187.881,120.173)
OP1: (30.173,181.951,124.388)
OP2: (29.671,182.778,122.008)
C2: (33.692,188.201,121.371)
C1': (32.205,187.498,123.166)
C3': (30.285,187.110,124.475)
O5': (30.486,184.357,123.746)
O4': (32.578,186.535,124.131)
C5': (31.157,184.741,124.967)
P: (30.496,182.845,123.242)
C4': (31.430,186.230,124.975)
C2': (30.689,187.388,123.031)
O2': (30.141,188.570,122.477)
N1: (32.903,187.208,121.909)
O4: (34.746,186.557,118.407)
O2: (33.861,189.284,121.912)
C6: (32.761,185.995,121.279)
C5: (33.349,185.713,120.116)
O3': (30.240,188.328,125.203)
N3: (34.283,187.881,120.173)
OP1: (30.173,181.951,124.388)
OP2: (29.671,182.778,122.008)
C2: (33.692,188.201,121.371)
C1': (32.205,187.498,123.166)
C3': (30.285,187.110,124.475)
O5': (30.486,184.357,123.746)
O4': (32.578,186.535,124.131)
C5': (31.157,184.741,124.967)
P: (30.496,182.845,123.242)
C4': (31.430,186.230,124.975)
C2': (30.689,187.388,123.031)
O2': (30.141,188.570,122.477)
N1: (32.903,187.208,121.909)
O4: (34.746,186.557,118.407)
O2: (33.861,189.284,121.912)
C6: (32.761,185.995,121.279)
C5: (33.349,185.713,120.116)
O3': (30.240,188.328,125.203)
C2: (32.620,184.360,110.980)
OP1: (32.267,183.109,118.305)
OP2: (31.487,181.404,116.556)
C4: (32.697,182.039,111.149)
O5': (31.358,183.871,116.133)
C3': (30.409,185.954,114.310)
C1': (32.365,185.775,112.996)
O4': (32.740,185.672,114.359)
C5': (31.618,185.253,116.458)
P: (32.132,182.699,116.884)
O2: (32.640,185.405,110.310)
C4': (31.634,186.089,115.201)
C2': (30.955,186.368,112.948)
O2': (31.070,187.767,112.797)
N1: (32.478,184.444,112.372)
N3: (32.728,183.142,110.399)
N4: (32.799,180.861,110.530)
C6: (32.450,183.304,113.131)
C5: (32.556,182.094,112.566)
O3': (29.346,186.797,114.764)
OP1: (32.267,183.109,118.305)
OP2: (31.487,181.404,116.556)
C4: (32.697,182.039,111.149)
O5': (31.358,183.871,116.133)
C3': (30.409,185.954,114.310)
C1': (32.365,185.775,112.996)
O4': (32.740,185.672,114.359)
C5': (31.618,185.253,116.458)
P: (32.132,182.699,116.884)
O2: (32.640,185.405,110.310)
C4': (31.634,186.089,115.201)
C2': (30.955,186.368,112.948)
O2': (31.070,187.767,112.797)
N1: (32.478,184.444,112.372)
N3: (32.728,183.142,110.399)
N4: (32.799,180.861,110.530)
C6: (32.450,183.304,113.131)
C5: (32.556,182.094,112.566)
O3': (29.346,186.797,114.764)
Image (generated by PyMOL):