Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:01087:01086
Extra
PDB:
ATOM 1 O3' C A1086 49.684 101.362 115.003 1.00 41.29 O
ATOM 2 P U A1087 48.466 101.102 116.021 1.00 42.75 P
ATOM 3 OP1 U A1087 49.004 101.102 117.405 1.00 42.83 O
ATOM 4 OP2 U A1087 47.705 99.924 115.527 1.00 42.02 O
ATOM 5 O5' U A1087 47.552 102.388 115.871 1.00 40.88 O
ATOM 6 C5' U A1087 48.066 103.681 116.186 1.00 41.17 C
ATOM 7 C4' U A1087 46.987 104.712 116.030 1.00 41.93 C
ATOM 8 O4' U A1087 46.652 104.847 114.617 1.00 42.29 O
ATOM 9 C3' U A1087 45.684 104.368 116.745 1.00 41.69 C
ATOM 10 O3' U A1087 45.080 105.563 117.215 1.00 43.82 O
ATOM 11 C2' U A1087 44.846 103.774 115.620 1.00 41.67 C
ATOM 12 O2' U A1087 43.461 103.857 115.861 1.00 42.03 O
ATOM 13 C1' U A1087 45.262 104.672 114.461 1.00 41.85 C
ATOM 14 N1 U A1087 44.978 104.212 113.092 1.00 41.36 N
ATOM 15 C2 U A1087 44.423 105.142 112.224 1.00 41.90 C
ATOM 16 O2 U A1087 44.170 106.291 112.555 1.00 42.52 O
ATOM 17 N3 U A1087 44.174 104.680 110.957 1.00 40.77 N
ATOM 18 C4 U A1087 44.410 103.415 110.473 1.00 41.70 C
ATOM 19 O4 U A1087 44.112 103.152 109.303 1.00 42.29 O
ATOM 20 C5 U A1087 44.985 102.507 111.427 1.00 41.85 C
ATOM 21 C6 U A1087 45.244 102.928 112.673 1.00 41.56 C
ATOM 22 P C A1088 45.092 105.891 118.786 1.00 48.54 P
ATOM 23 OP1 C A1088 44.466 107.230 118.968 1.00 46.51 O
ATOM 24 OP2 C A1088 46.472 105.650 119.296 1.00 47.72 O
ATOM 25 O5' C A1088 44.140 104.772 119.414 1.00 47.87 O
TER
ATOM 1 O3' C B1085 45.647 99.117 111.700 1.00 43.50 O
ATOM 2 P C B1086 47.124 99.077 111.051 1.00 44.97 P
ATOM 3 OP1 C B1086 47.117 99.869 109.794 1.00 45.84 O
ATOM 4 OP2 C B1086 47.585 97.667 111.018 1.00 43.89 O
ATOM 5 O5' C B1086 47.999 99.882 112.104 1.00 43.27 O
ATOM 6 C5' C B1086 49.388 99.600 112.291 1.00 40.76 C
ATOM 7 C4' C B1086 50.117 100.867 112.644 1.00 40.58 C
ATOM 8 O4' C B1086 50.246 101.688 111.460 1.00 38.47 O
ATOM 9 C3' C B1086 49.418 101.762 113.657 1.00 40.03 C
ATOM 10 O3' C B1086 49.684 101.362 115.003 1.00 41.29 O
ATOM 11 C2' C B1086 50.016 103.128 113.352 1.00 38.79 C
ATOM 12 O2' C B1086 51.262 103.326 113.985 1.00 37.93 O
ATOM 13 C1' C B1086 50.199 103.055 111.830 1.00 38.19 C
ATOM 14 N1 C B1086 49.143 103.721 111.043 1.00 37.69 N
ATOM 15 C2 C B1086 48.967 105.104 111.176 1.00 36.93 C
ATOM 16 O2 C B1086 49.689 105.732 111.966 1.00 39.13 O
ATOM 17 N3 C B1086 48.019 105.721 110.444 1.00 35.89 N
ATOM 18 C4 C B1086 47.262 105.019 109.607 1.00 35.04 C
ATOM 19 N4 C B1086 46.349 105.678 108.901 1.00 36.85 N
ATOM 20 C5 C B1086 47.410 103.611 109.455 1.00 35.76 C
ATOM 21 C6 C B1086 48.350 103.007 110.186 1.00 36.81 C
ATOM 22 P U B1087 48.466 101.102 116.021 1.00 42.75 P
ATOM 23 OP1 U B1087 49.004 101.102 117.405 1.00 42.83 O
ATOM 24 OP2 U B1087 47.705 99.924 115.527 1.00 42.02 O
ATOM 25 O5' U B1087 47.552 102.388 115.871 1.00 40.88 O
TER
ATOM 2 P U A1087 48.466 101.102 116.021 1.00 42.75 P
ATOM 3 OP1 U A1087 49.004 101.102 117.405 1.00 42.83 O
ATOM 4 OP2 U A1087 47.705 99.924 115.527 1.00 42.02 O
ATOM 5 O5' U A1087 47.552 102.388 115.871 1.00 40.88 O
ATOM 6 C5' U A1087 48.066 103.681 116.186 1.00 41.17 C
ATOM 7 C4' U A1087 46.987 104.712 116.030 1.00 41.93 C
ATOM 8 O4' U A1087 46.652 104.847 114.617 1.00 42.29 O
ATOM 9 C3' U A1087 45.684 104.368 116.745 1.00 41.69 C
ATOM 10 O3' U A1087 45.080 105.563 117.215 1.00 43.82 O
ATOM 11 C2' U A1087 44.846 103.774 115.620 1.00 41.67 C
ATOM 12 O2' U A1087 43.461 103.857 115.861 1.00 42.03 O
ATOM 13 C1' U A1087 45.262 104.672 114.461 1.00 41.85 C
ATOM 14 N1 U A1087 44.978 104.212 113.092 1.00 41.36 N
ATOM 15 C2 U A1087 44.423 105.142 112.224 1.00 41.90 C
ATOM 16 O2 U A1087 44.170 106.291 112.555 1.00 42.52 O
ATOM 17 N3 U A1087 44.174 104.680 110.957 1.00 40.77 N
ATOM 18 C4 U A1087 44.410 103.415 110.473 1.00 41.70 C
ATOM 19 O4 U A1087 44.112 103.152 109.303 1.00 42.29 O
ATOM 20 C5 U A1087 44.985 102.507 111.427 1.00 41.85 C
ATOM 21 C6 U A1087 45.244 102.928 112.673 1.00 41.56 C
ATOM 22 P C A1088 45.092 105.891 118.786 1.00 48.54 P
ATOM 23 OP1 C A1088 44.466 107.230 118.968 1.00 46.51 O
ATOM 24 OP2 C A1088 46.472 105.650 119.296 1.00 47.72 O
ATOM 25 O5' C A1088 44.140 104.772 119.414 1.00 47.87 O
TER
ATOM 1 O3' C B1085 45.647 99.117 111.700 1.00 43.50 O
ATOM 2 P C B1086 47.124 99.077 111.051 1.00 44.97 P
ATOM 3 OP1 C B1086 47.117 99.869 109.794 1.00 45.84 O
ATOM 4 OP2 C B1086 47.585 97.667 111.018 1.00 43.89 O
ATOM 5 O5' C B1086 47.999 99.882 112.104 1.00 43.27 O
ATOM 6 C5' C B1086 49.388 99.600 112.291 1.00 40.76 C
ATOM 7 C4' C B1086 50.117 100.867 112.644 1.00 40.58 C
ATOM 8 O4' C B1086 50.246 101.688 111.460 1.00 38.47 O
ATOM 9 C3' C B1086 49.418 101.762 113.657 1.00 40.03 C
ATOM 10 O3' C B1086 49.684 101.362 115.003 1.00 41.29 O
ATOM 11 C2' C B1086 50.016 103.128 113.352 1.00 38.79 C
ATOM 12 O2' C B1086 51.262 103.326 113.985 1.00 37.93 O
ATOM 13 C1' C B1086 50.199 103.055 111.830 1.00 38.19 C
ATOM 14 N1 C B1086 49.143 103.721 111.043 1.00 37.69 N
ATOM 15 C2 C B1086 48.967 105.104 111.176 1.00 36.93 C
ATOM 16 O2 C B1086 49.689 105.732 111.966 1.00 39.13 O
ATOM 17 N3 C B1086 48.019 105.721 110.444 1.00 35.89 N
ATOM 18 C4 C B1086 47.262 105.019 109.607 1.00 35.04 C
ATOM 19 N4 C B1086 46.349 105.678 108.901 1.00 36.85 N
ATOM 20 C5 C B1086 47.410 103.611 109.455 1.00 35.76 C
ATOM 21 C6 C B1086 48.350 103.007 110.186 1.00 36.81 C
ATOM 22 P U B1087 48.466 101.102 116.021 1.00 42.75 P
ATOM 23 OP1 U B1087 49.004 101.102 117.405 1.00 42.83 O
ATOM 24 OP2 U B1087 47.705 99.924 115.527 1.00 42.02 O
ATOM 25 O5' U B1087 47.552 102.388 115.871 1.00 40.88 O
TER
Atoms:
C4: (44.410,103.415,110.473)
N3: (44.174,104.680,110.957)
OP1: (49.004,101.102,117.405)
OP2: (47.705,99.924,115.527)
C2: (44.423,105.142,112.224)
C1': (45.262,104.672,114.461)
C3': (45.684,104.368,116.745)
O5': (47.552,102.388,115.871)
O4': (46.652,104.847,114.617)
C5': (48.066,103.681,116.186)
P: (48.466,101.102,116.021)
C4': (46.987,104.712,116.030)
C2': (44.846,103.774,115.620)
O2': (43.461,103.857,115.861)
N1: (44.978,104.212,113.092)
O4: (44.112,103.152,109.303)
O2: (44.170,106.291,112.555)
C6: (45.244,102.928,112.673)
C5: (44.985,102.507,111.427)
O3': (45.080,105.563,117.215)
N3: (44.174,104.680,110.957)
OP1: (49.004,101.102,117.405)
OP2: (47.705,99.924,115.527)
C2: (44.423,105.142,112.224)
C1': (45.262,104.672,114.461)
C3': (45.684,104.368,116.745)
O5': (47.552,102.388,115.871)
O4': (46.652,104.847,114.617)
C5': (48.066,103.681,116.186)
P: (48.466,101.102,116.021)
C4': (46.987,104.712,116.030)
C2': (44.846,103.774,115.620)
O2': (43.461,103.857,115.861)
N1: (44.978,104.212,113.092)
O4: (44.112,103.152,109.303)
O2: (44.170,106.291,112.555)
C6: (45.244,102.928,112.673)
C5: (44.985,102.507,111.427)
O3': (45.080,105.563,117.215)
C2: (48.967,105.104,111.176)
OP1: (47.117,99.869,109.794)
OP2: (47.585,97.667,111.018)
C4: (47.262,105.019,109.607)
O5': (47.999,99.882,112.104)
C3': (49.418,101.762,113.657)
C1': (50.199,103.055,111.830)
O4': (50.246,101.688,111.460)
C5': (49.388,99.600,112.291)
P: (47.124,99.077,111.051)
O2: (49.689,105.732,111.966)
C4': (50.117,100.867,112.644)
C2': (50.016,103.128,113.352)
O2': (51.262,103.326,113.985)
N1: (49.143,103.721,111.043)
N3: (48.019,105.721,110.444)
N4: (46.349,105.678,108.901)
C6: (48.350,103.007,110.186)
C5: (47.410,103.611,109.455)
O3': (49.684,101.362,115.003)
OP1: (47.117,99.869,109.794)
OP2: (47.585,97.667,111.018)
C4: (47.262,105.019,109.607)
O5': (47.999,99.882,112.104)
C3': (49.418,101.762,113.657)
C1': (50.199,103.055,111.830)
O4': (50.246,101.688,111.460)
C5': (49.388,99.600,112.291)
P: (47.124,99.077,111.051)
O2: (49.689,105.732,111.966)
C4': (50.117,100.867,112.644)
C2': (50.016,103.128,113.352)
O2': (51.262,103.326,113.985)
N1: (49.143,103.721,111.043)
N3: (48.019,105.721,110.444)
N4: (46.349,105.678,108.901)
C6: (48.350,103.007,110.186)
C5: (47.410,103.611,109.455)
O3': (49.684,101.362,115.003)
Image (generated by PyMOL):