Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0258:0228
Extra
PDB:
ATOM 1 O3' G A 257 79.427 104.183 0.026 1.00 56.66 O
ATOM 2 P U A 258 77.967 104.131 0.678 1.00 58.78 P
ATOM 3 OP1 U A 258 77.284 102.913 0.174 1.00 59.21 O
ATOM 4 OP2 U A 258 77.328 105.464 0.487 1.00 58.99 O
ATOM 5 O5' U A 258 78.276 103.930 2.225 1.00 59.08 O
ATOM 6 C5' U A 258 78.994 102.769 2.679 1.00 60.20 C
ATOM 7 C4' U A 258 79.240 102.850 4.166 1.00 60.78 C
ATOM 8 O4' U A 258 80.300 103.811 4.441 1.00 59.02 O
ATOM 9 C3' U A 258 78.041 103.286 5.007 1.00 61.13 C
ATOM 10 O3' U A 258 78.062 102.614 6.261 1.00 63.54 O
ATOM 11 C2' U A 258 78.323 104.766 5.234 1.00 59.48 C
ATOM 12 O2' U A 258 77.697 105.277 6.396 1.00 60.74 O
ATOM 13 C1' U A 258 79.840 104.735 5.399 1.00 56.84 C
ATOM 14 N1 U A 258 80.576 106.001 5.255 1.00 52.73 N
ATOM 15 C2 U A 258 81.903 106.012 5.661 1.00 51.19 C
ATOM 16 O2 U A 258 82.493 105.012 6.041 1.00 48.97 O
ATOM 17 N3 U A 258 82.515 107.238 5.602 1.00 49.57 N
ATOM 18 C4 U A 258 81.959 108.424 5.177 1.00 48.15 C
ATOM 19 O4 U A 258 82.593 109.466 5.324 1.00 48.30 O
ATOM 20 C5 U A 258 80.606 108.323 4.725 1.00 49.06 C
ATOM 21 C6 U A 258 79.976 107.146 4.775 1.00 50.61 C
ATOM 22 P C A 259 76.683 102.156 6.938 1.00 65.76 P
ATOM 23 OP1 C A 259 75.626 103.172 6.688 1.00 63.62 O
ATOM 24 OP2 C A 259 77.012 101.761 8.332 1.00 67.15 O
ATOM 25 O5' C A 259 76.286 100.846 6.133 1.00 68.61 O
TER
ATOM 1 O3' C B 227 77.326 112.885 4.654 1.00 52.70 O
ATOM 2 P C B 228 78.762 112.511 4.032 1.00 54.91 P
ATOM 3 OP1 C B 228 78.878 113.285 2.770 1.00 54.30 O
ATOM 4 OP2 C B 228 78.941 111.033 4.012 1.00 52.26 O
ATOM 5 O5' C B 228 79.795 113.102 5.091 1.00 53.87 O
ATOM 6 C5' C B 228 81.165 112.679 5.103 1.00 51.39 C
ATOM 7 C4' C B 228 81.764 112.915 6.463 1.00 50.45 C
ATOM 8 O4' C B 228 81.059 112.128 7.453 1.00 49.45 O
ATOM 9 C3' C B 228 83.210 112.486 6.600 1.00 51.25 C
ATOM 10 O3' C B 228 84.056 113.535 6.134 1.00 52.88 O
ATOM 11 C2' C B 228 83.350 112.269 8.104 1.00 51.29 C
ATOM 12 O2' C B 228 83.580 113.465 8.825 1.00 53.86 O
ATOM 13 C1' C B 228 81.962 111.728 8.475 1.00 50.23 C
ATOM 14 N1 C B 228 81.856 110.261 8.676 1.00 49.15 N
ATOM 15 C2 C B 228 82.833 109.587 9.453 1.00 49.36 C
ATOM 16 O2 C B 228 83.741 110.234 9.987 1.00 49.08 O
ATOM 17 N3 C B 228 82.749 108.244 9.599 1.00 49.56 N
ATOM 18 C4 C B 228 81.748 107.571 9.025 1.00 50.28 C
ATOM 19 N4 C B 228 81.721 106.245 9.174 1.00 49.93 N
ATOM 20 C5 C B 228 80.731 108.228 8.264 1.00 49.47 C
ATOM 21 C6 C B 228 80.824 109.557 8.115 1.00 49.11 C
ATOM 22 P A B 229 85.414 113.193 5.343 1.00 53.89 P
ATOM 23 OP1 A B 229 86.172 114.467 5.265 1.00 53.39 O
ATOM 24 OP2 A B 229 85.060 112.474 4.087 1.00 52.75 O
ATOM 25 O5' A B 229 86.208 112.225 6.327 1.00 48.98 O
TER
ATOM 2 P U A 258 77.967 104.131 0.678 1.00 58.78 P
ATOM 3 OP1 U A 258 77.284 102.913 0.174 1.00 59.21 O
ATOM 4 OP2 U A 258 77.328 105.464 0.487 1.00 58.99 O
ATOM 5 O5' U A 258 78.276 103.930 2.225 1.00 59.08 O
ATOM 6 C5' U A 258 78.994 102.769 2.679 1.00 60.20 C
ATOM 7 C4' U A 258 79.240 102.850 4.166 1.00 60.78 C
ATOM 8 O4' U A 258 80.300 103.811 4.441 1.00 59.02 O
ATOM 9 C3' U A 258 78.041 103.286 5.007 1.00 61.13 C
ATOM 10 O3' U A 258 78.062 102.614 6.261 1.00 63.54 O
ATOM 11 C2' U A 258 78.323 104.766 5.234 1.00 59.48 C
ATOM 12 O2' U A 258 77.697 105.277 6.396 1.00 60.74 O
ATOM 13 C1' U A 258 79.840 104.735 5.399 1.00 56.84 C
ATOM 14 N1 U A 258 80.576 106.001 5.255 1.00 52.73 N
ATOM 15 C2 U A 258 81.903 106.012 5.661 1.00 51.19 C
ATOM 16 O2 U A 258 82.493 105.012 6.041 1.00 48.97 O
ATOM 17 N3 U A 258 82.515 107.238 5.602 1.00 49.57 N
ATOM 18 C4 U A 258 81.959 108.424 5.177 1.00 48.15 C
ATOM 19 O4 U A 258 82.593 109.466 5.324 1.00 48.30 O
ATOM 20 C5 U A 258 80.606 108.323 4.725 1.00 49.06 C
ATOM 21 C6 U A 258 79.976 107.146 4.775 1.00 50.61 C
ATOM 22 P C A 259 76.683 102.156 6.938 1.00 65.76 P
ATOM 23 OP1 C A 259 75.626 103.172 6.688 1.00 63.62 O
ATOM 24 OP2 C A 259 77.012 101.761 8.332 1.00 67.15 O
ATOM 25 O5' C A 259 76.286 100.846 6.133 1.00 68.61 O
TER
ATOM 1 O3' C B 227 77.326 112.885 4.654 1.00 52.70 O
ATOM 2 P C B 228 78.762 112.511 4.032 1.00 54.91 P
ATOM 3 OP1 C B 228 78.878 113.285 2.770 1.00 54.30 O
ATOM 4 OP2 C B 228 78.941 111.033 4.012 1.00 52.26 O
ATOM 5 O5' C B 228 79.795 113.102 5.091 1.00 53.87 O
ATOM 6 C5' C B 228 81.165 112.679 5.103 1.00 51.39 C
ATOM 7 C4' C B 228 81.764 112.915 6.463 1.00 50.45 C
ATOM 8 O4' C B 228 81.059 112.128 7.453 1.00 49.45 O
ATOM 9 C3' C B 228 83.210 112.486 6.600 1.00 51.25 C
ATOM 10 O3' C B 228 84.056 113.535 6.134 1.00 52.88 O
ATOM 11 C2' C B 228 83.350 112.269 8.104 1.00 51.29 C
ATOM 12 O2' C B 228 83.580 113.465 8.825 1.00 53.86 O
ATOM 13 C1' C B 228 81.962 111.728 8.475 1.00 50.23 C
ATOM 14 N1 C B 228 81.856 110.261 8.676 1.00 49.15 N
ATOM 15 C2 C B 228 82.833 109.587 9.453 1.00 49.36 C
ATOM 16 O2 C B 228 83.741 110.234 9.987 1.00 49.08 O
ATOM 17 N3 C B 228 82.749 108.244 9.599 1.00 49.56 N
ATOM 18 C4 C B 228 81.748 107.571 9.025 1.00 50.28 C
ATOM 19 N4 C B 228 81.721 106.245 9.174 1.00 49.93 N
ATOM 20 C5 C B 228 80.731 108.228 8.264 1.00 49.47 C
ATOM 21 C6 C B 228 80.824 109.557 8.115 1.00 49.11 C
ATOM 22 P A B 229 85.414 113.193 5.343 1.00 53.89 P
ATOM 23 OP1 A B 229 86.172 114.467 5.265 1.00 53.39 O
ATOM 24 OP2 A B 229 85.060 112.474 4.087 1.00 52.75 O
ATOM 25 O5' A B 229 86.208 112.225 6.327 1.00 48.98 O
TER
Atoms:
C4: (81.959,108.424,5.177)
N3: (82.515,107.238,5.602)
OP1: (77.284,102.913,0.174)
OP2: (77.328,105.464,0.487)
C2: (81.903,106.012,5.661)
C1': (79.840,104.735,5.399)
C3': (78.041,103.286,5.007)
O5': (78.276,103.930,2.225)
O4': (80.300,103.811,4.441)
C5': (78.994,102.769,2.679)
P: (77.967,104.131,0.678)
C4': (79.240,102.850,4.166)
C2': (78.323,104.766,5.234)
O2': (77.697,105.277,6.396)
N1: (80.576,106.001,5.255)
O4: (82.593,109.466,5.324)
O2: (82.493,105.012,6.041)
C6: (79.976,107.146,4.775)
C5: (80.606,108.323,4.725)
O3': (78.062,102.614,6.261)
N3: (82.515,107.238,5.602)
OP1: (77.284,102.913,0.174)
OP2: (77.328,105.464,0.487)
C2: (81.903,106.012,5.661)
C1': (79.840,104.735,5.399)
C3': (78.041,103.286,5.007)
O5': (78.276,103.930,2.225)
O4': (80.300,103.811,4.441)
C5': (78.994,102.769,2.679)
P: (77.967,104.131,0.678)
C4': (79.240,102.850,4.166)
C2': (78.323,104.766,5.234)
O2': (77.697,105.277,6.396)
N1: (80.576,106.001,5.255)
O4: (82.593,109.466,5.324)
O2: (82.493,105.012,6.041)
C6: (79.976,107.146,4.775)
C5: (80.606,108.323,4.725)
O3': (78.062,102.614,6.261)
C2: (82.833,109.587,9.453)
OP1: (78.878,113.285,2.770)
OP2: (78.941,111.033,4.012)
C4: (81.748,107.571,9.025)
O5': (79.795,113.102,5.091)
C3': (83.210,112.486,6.600)
C1': (81.962,111.728,8.475)
O4': (81.059,112.128,7.453)
C5': (81.165,112.679,5.103)
P: (78.762,112.511,4.032)
O2: (83.741,110.234,9.987)
C4': (81.764,112.915,6.463)
C2': (83.350,112.269,8.104)
O2': (83.580,113.465,8.825)
N1: (81.856,110.261,8.676)
N3: (82.749,108.244,9.599)
N4: (81.721,106.245,9.174)
C6: (80.824,109.557,8.115)
C5: (80.731,108.228,8.264)
O3': (84.056,113.535,6.134)
OP1: (78.878,113.285,2.770)
OP2: (78.941,111.033,4.012)
C4: (81.748,107.571,9.025)
O5': (79.795,113.102,5.091)
C3': (83.210,112.486,6.600)
C1': (81.962,111.728,8.475)
O4': (81.059,112.128,7.453)
C5': (81.165,112.679,5.103)
P: (78.762,112.511,4.032)
O2: (83.741,110.234,9.987)
C4': (81.764,112.915,6.463)
C2': (83.350,112.269,8.104)
O2': (83.580,113.465,8.825)
N1: (81.856,110.261,8.676)
N3: (82.749,108.244,9.599)
N4: (81.721,106.245,9.174)
C6: (80.824,109.557,8.115)
C5: (80.731,108.228,8.264)
O3': (84.056,113.535,6.134)
Image (generated by PyMOL):