Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:02688:02746
Extra
PDB:
ATOM 1 O3' G A2687 32.290 182.412 122.670 1.00 61.27 O
ATOM 2 P U A2688 30.801 182.592 123.236 1.00 60.49 P
ATOM 3 OP1 U A2688 30.667 181.718 124.429 1.00 59.37 O
ATOM 4 OP2 U A2688 29.847 182.444 122.106 1.00 57.60 O
ATOM 5 O5' U A2688 30.793 184.108 123.719 1.00 63.16 O
ATOM 6 C5' U A2688 31.447 184.498 124.946 1.00 68.88 C
ATOM 7 C4' U A2688 31.671 185.992 124.970 1.00 73.07 C
ATOM 8 O4' U A2688 32.808 186.342 124.130 1.00 73.50 O
ATOM 9 C3' U A2688 30.495 186.824 124.467 1.00 76.08 C
ATOM 10 O3' U A2688 30.396 188.034 125.195 1.00 79.43 O
ATOM 11 C2' U A2688 30.891 187.120 123.026 1.00 76.05 C
ATOM 12 O2' U A2688 30.285 188.278 122.483 1.00 76.49 O
ATOM 13 C1' U A2688 32.402 187.291 123.164 1.00 74.55 C
ATOM 14 N1 U A2688 33.111 187.021 121.909 1.00 73.39 N
ATOM 15 C2 U A2688 33.810 188.060 121.329 1.00 73.34 C
ATOM 16 O2 U A2688 33.900 189.168 121.834 1.00 73.85 O
ATOM 17 N3 U A2688 34.406 187.756 120.133 1.00 74.13 N
ATOM 18 C4 U A2688 34.378 186.544 119.476 1.00 74.44 C
ATOM 19 O4 U A2688 34.921 186.438 118.378 1.00 75.18 O
ATOM 20 C5 U A2688 33.655 185.515 120.153 1.00 75.29 C
ATOM 21 C6 U A2688 33.064 185.782 121.318 1.00 74.13 C
ATOM 22 P C A2689 29.059 188.349 126.022 1.00 82.54 P
ATOM 23 OP1 C A2689 28.082 187.243 125.803 1.00 81.67 O
ATOM 24 OP2 C A2689 28.674 189.744 125.681 1.00 81.99 O
ATOM 25 O5' C A2689 29.546 188.297 127.540 1.00 81.95 O
TER
ATOM 1 O3' A B2745 33.876 182.432 116.086 1.00 62.42 O
ATOM 2 P C B2746 32.410 182.506 116.731 1.00 64.48 P
ATOM 3 OP1 C B2746 32.515 182.976 118.141 1.00 63.19 O
ATOM 4 OP2 C B2746 31.728 181.225 116.433 1.00 62.43 O
ATOM 5 O5' C B2746 31.713 183.676 115.910 1.00 65.71 O
ATOM 6 C5' C B2746 31.967 185.055 116.240 1.00 68.21 C
ATOM 7 C4' C B2746 31.927 185.899 114.993 1.00 69.90 C
ATOM 8 O4' C B2746 33.005 185.494 114.115 1.00 70.01 O
ATOM 9 C3' C B2746 30.670 185.747 114.150 1.00 71.48 C
ATOM 10 O3' C B2746 29.616 186.583 114.632 1.00 73.24 O
ATOM 11 C2' C B2746 31.160 186.158 112.768 1.00 71.75 C
ATOM 12 O2' C B2746 31.258 187.559 112.620 1.00 73.53 O
ATOM 13 C1' C B2746 32.575 185.574 112.767 1.00 71.21 C
ATOM 14 N1 C B2746 32.672 184.235 112.159 1.00 71.06 N
ATOM 15 C2 C B2746 32.703 184.128 110.760 1.00 71.22 C
ATOM 16 O2 C B2746 32.622 185.160 110.072 1.00 72.64 O
ATOM 17 N3 C B2746 32.814 182.905 110.192 1.00 70.68 N
ATOM 18 C4 C B2746 32.881 181.816 110.962 1.00 70.74 C
ATOM 19 N4 C B2746 32.986 180.630 110.357 1.00 70.16 N
ATOM 20 C5 C B2746 32.841 181.894 112.386 1.00 70.74 C
ATOM 21 C6 C B2746 32.738 183.110 112.937 1.00 70.78 C
ATOM 22 P A B2747 28.103 186.035 114.653 1.00 74.73 P
ATOM 23 OP1 A B2747 27.220 187.172 115.020 1.00 74.97 O
ATOM 24 OP2 A B2747 28.051 184.785 115.450 1.00 74.55 O
ATOM 25 O5' A B2747 27.820 185.664 113.134 1.00 76.37 O
TER
ATOM 2 P U A2688 30.801 182.592 123.236 1.00 60.49 P
ATOM 3 OP1 U A2688 30.667 181.718 124.429 1.00 59.37 O
ATOM 4 OP2 U A2688 29.847 182.444 122.106 1.00 57.60 O
ATOM 5 O5' U A2688 30.793 184.108 123.719 1.00 63.16 O
ATOM 6 C5' U A2688 31.447 184.498 124.946 1.00 68.88 C
ATOM 7 C4' U A2688 31.671 185.992 124.970 1.00 73.07 C
ATOM 8 O4' U A2688 32.808 186.342 124.130 1.00 73.50 O
ATOM 9 C3' U A2688 30.495 186.824 124.467 1.00 76.08 C
ATOM 10 O3' U A2688 30.396 188.034 125.195 1.00 79.43 O
ATOM 11 C2' U A2688 30.891 187.120 123.026 1.00 76.05 C
ATOM 12 O2' U A2688 30.285 188.278 122.483 1.00 76.49 O
ATOM 13 C1' U A2688 32.402 187.291 123.164 1.00 74.55 C
ATOM 14 N1 U A2688 33.111 187.021 121.909 1.00 73.39 N
ATOM 15 C2 U A2688 33.810 188.060 121.329 1.00 73.34 C
ATOM 16 O2 U A2688 33.900 189.168 121.834 1.00 73.85 O
ATOM 17 N3 U A2688 34.406 187.756 120.133 1.00 74.13 N
ATOM 18 C4 U A2688 34.378 186.544 119.476 1.00 74.44 C
ATOM 19 O4 U A2688 34.921 186.438 118.378 1.00 75.18 O
ATOM 20 C5 U A2688 33.655 185.515 120.153 1.00 75.29 C
ATOM 21 C6 U A2688 33.064 185.782 121.318 1.00 74.13 C
ATOM 22 P C A2689 29.059 188.349 126.022 1.00 82.54 P
ATOM 23 OP1 C A2689 28.082 187.243 125.803 1.00 81.67 O
ATOM 24 OP2 C A2689 28.674 189.744 125.681 1.00 81.99 O
ATOM 25 O5' C A2689 29.546 188.297 127.540 1.00 81.95 O
TER
ATOM 1 O3' A B2745 33.876 182.432 116.086 1.00 62.42 O
ATOM 2 P C B2746 32.410 182.506 116.731 1.00 64.48 P
ATOM 3 OP1 C B2746 32.515 182.976 118.141 1.00 63.19 O
ATOM 4 OP2 C B2746 31.728 181.225 116.433 1.00 62.43 O
ATOM 5 O5' C B2746 31.713 183.676 115.910 1.00 65.71 O
ATOM 6 C5' C B2746 31.967 185.055 116.240 1.00 68.21 C
ATOM 7 C4' C B2746 31.927 185.899 114.993 1.00 69.90 C
ATOM 8 O4' C B2746 33.005 185.494 114.115 1.00 70.01 O
ATOM 9 C3' C B2746 30.670 185.747 114.150 1.00 71.48 C
ATOM 10 O3' C B2746 29.616 186.583 114.632 1.00 73.24 O
ATOM 11 C2' C B2746 31.160 186.158 112.768 1.00 71.75 C
ATOM 12 O2' C B2746 31.258 187.559 112.620 1.00 73.53 O
ATOM 13 C1' C B2746 32.575 185.574 112.767 1.00 71.21 C
ATOM 14 N1 C B2746 32.672 184.235 112.159 1.00 71.06 N
ATOM 15 C2 C B2746 32.703 184.128 110.760 1.00 71.22 C
ATOM 16 O2 C B2746 32.622 185.160 110.072 1.00 72.64 O
ATOM 17 N3 C B2746 32.814 182.905 110.192 1.00 70.68 N
ATOM 18 C4 C B2746 32.881 181.816 110.962 1.00 70.74 C
ATOM 19 N4 C B2746 32.986 180.630 110.357 1.00 70.16 N
ATOM 20 C5 C B2746 32.841 181.894 112.386 1.00 70.74 C
ATOM 21 C6 C B2746 32.738 183.110 112.937 1.00 70.78 C
ATOM 22 P A B2747 28.103 186.035 114.653 1.00 74.73 P
ATOM 23 OP1 A B2747 27.220 187.172 115.020 1.00 74.97 O
ATOM 24 OP2 A B2747 28.051 184.785 115.450 1.00 74.55 O
ATOM 25 O5' A B2747 27.820 185.664 113.134 1.00 76.37 O
TER
Atoms:
C4: (34.378,186.544,119.476)
N3: (34.406,187.756,120.133)
OP1: (30.667,181.718,124.429)
OP2: (29.847,182.444,122.106)
C2: (33.810,188.060,121.329)
C1': (32.402,187.291,123.164)
C3': (30.495,186.824,124.467)
O5': (30.793,184.108,123.719)
O4': (32.808,186.342,124.130)
C5': (31.447,184.498,124.946)
P: (30.801,182.592,123.236)
C4': (31.671,185.992,124.970)
C2': (30.891,187.120,123.026)
O2': (30.285,188.278,122.483)
N1: (33.111,187.021,121.909)
O4: (34.921,186.438,118.378)
O2: (33.900,189.168,121.834)
C6: (33.064,185.782,121.318)
C5: (33.655,185.515,120.153)
O3': (30.396,188.034,125.195)
N3: (34.406,187.756,120.133)
OP1: (30.667,181.718,124.429)
OP2: (29.847,182.444,122.106)
C2: (33.810,188.060,121.329)
C1': (32.402,187.291,123.164)
C3': (30.495,186.824,124.467)
O5': (30.793,184.108,123.719)
O4': (32.808,186.342,124.130)
C5': (31.447,184.498,124.946)
P: (30.801,182.592,123.236)
C4': (31.671,185.992,124.970)
C2': (30.891,187.120,123.026)
O2': (30.285,188.278,122.483)
N1: (33.111,187.021,121.909)
O4: (34.921,186.438,118.378)
O2: (33.900,189.168,121.834)
C6: (33.064,185.782,121.318)
C5: (33.655,185.515,120.153)
O3': (30.396,188.034,125.195)
C2: (32.703,184.128,110.760)
OP1: (32.515,182.976,118.141)
OP2: (31.728,181.225,116.433)
C4: (32.881,181.816,110.962)
O5': (31.713,183.676,115.910)
C3': (30.670,185.747,114.150)
C1': (32.575,185.574,112.767)
O4': (33.005,185.494,114.115)
C5': (31.967,185.055,116.240)
P: (32.410,182.506,116.731)
O2: (32.622,185.160,110.072)
C4': (31.927,185.899,114.993)
C2': (31.160,186.158,112.768)
O2': (31.258,187.559,112.620)
N1: (32.672,184.235,112.159)
N3: (32.814,182.905,110.192)
N4: (32.986,180.630,110.357)
C6: (32.738,183.110,112.937)
C5: (32.841,181.894,112.386)
O3': (29.616,186.583,114.632)
OP1: (32.515,182.976,118.141)
OP2: (31.728,181.225,116.433)
C4: (32.881,181.816,110.962)
O5': (31.713,183.676,115.910)
C3': (30.670,185.747,114.150)
C1': (32.575,185.574,112.767)
O4': (33.005,185.494,114.115)
C5': (31.967,185.055,116.240)
P: (32.410,182.506,116.731)
O2: (32.622,185.160,110.072)
C4': (31.927,185.899,114.993)
C2': (31.160,186.158,112.768)
O2': (31.258,187.559,112.620)
N1: (32.672,184.235,112.159)
N3: (32.814,182.905,110.192)
N4: (32.986,180.630,110.357)
C6: (32.738,183.110,112.937)
C5: (32.841,181.894,112.386)
O3': (29.616,186.583,114.632)
Image (generated by PyMOL):