Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2JLX:C4:C5
Extra
PDB:
ATOM 1 O3' C A 3 36.841 -4.683 10.995 1.00 20.11 O
ATOM 2 P U A 4 35.977 -5.218 12.212 1.00 21.25 P
ATOM 3 OP1 U A 4 34.707 -4.457 12.282 1.00 20.99 O
ATOM 4 OP2 U A 4 35.961 -6.682 12.021 1.00 22.80 O
ATOM 5 O5' U A 4 36.846 -4.870 13.500 1.00 24.21 O
ATOM 6 C5' U A 4 37.980 -5.638 13.849 1.00 29.05 C
ATOM 7 C4' U A 4 38.586 -5.013 15.083 1.00 32.49 C
ATOM 8 O4' U A 4 38.684 -3.582 14.854 1.00 34.16 O
ATOM 9 C3' U A 4 37.703 -5.215 16.314 1.00 34.85 C
ATOM 10 O3' U A 4 38.411 -5.864 17.378 1.00 36.84 O
ATOM 11 C2' U A 4 37.197 -3.810 16.643 1.00 35.02 C
ATOM 12 O2' U A 4 37.035 -3.519 18.016 1.00 35.95 O
ATOM 13 C1' U A 4 38.285 -2.932 16.035 1.00 35.24 C
ATOM 14 N1 U A 4 37.734 -1.587 15.774 1.00 35.38 N
ATOM 15 C2 U A 4 38.376 -0.492 16.321 1.00 35.75 C
ATOM 16 O2 U A 4 39.399 -0.565 16.977 1.00 35.73 O
ATOM 17 N3 U A 4 37.774 0.712 16.055 1.00 35.49 N
ATOM 18 C4 U A 4 36.611 0.907 15.329 1.00 35.48 C
ATOM 19 O4 U A 4 36.188 2.044 15.174 1.00 35.82 O
ATOM 20 C5 U A 4 35.991 -0.283 14.800 1.00 35.41 C
ATOM 21 C6 U A 4 36.563 -1.465 15.045 1.00 35.15 C
ATOM 22 P A A 5 37.640 -6.927 18.306 1.00 38.70 P
ATOM 23 OP1 A A 5 38.030 -6.625 19.703 1.00 38.49 O
ATOM 24 OP2 A A 5 36.209 -6.945 17.915 1.00 39.22 O
ATOM 25 O5' A A 5 38.246 -8.355 17.907 1.00 40.01 O
TER
ATOM 1 O3' U B 4 38.411 -5.864 17.378 1.00 36.84 O
ATOM 2 P A B 5 37.640 -6.927 18.306 1.00 38.70 P
ATOM 3 OP1 A B 5 38.030 -6.625 19.703 1.00 38.49 O
ATOM 4 OP2 A B 5 36.209 -6.945 17.915 1.00 39.22 O
ATOM 5 O5' A B 5 38.246 -8.355 17.907 1.00 40.01 O
ATOM 6 C5' A B 5 38.282 -8.837 16.562 1.00 41.36 C
ATOM 7 C4' A B 5 39.720 -9.050 16.134 1.00 43.07 C
ATOM 8 O4' A B 5 40.377 -7.768 16.068 1.00 43.28 O
ATOM 9 C3' A B 5 40.599 -9.803 17.122 1.00 44.39 C
ATOM 10 O3' A B 5 40.377 -11.216 17.076 1.00 46.29 O
ATOM 11 C2' A B 5 42.006 -9.398 16.685 1.00 44.48 C
ATOM 12 O2' A B 5 42.569 -10.241 15.688 1.00 43.46 O
ATOM 13 C1' A B 5 41.778 -7.983 16.143 1.00 44.83 C
ATOM 14 N9 A B 5 42.404 -6.890 16.900 1.00 45.14 N
ATOM 15 C8 A B 5 41.784 -5.749 17.336 1.00 45.33 C
ATOM 16 N7 A B 5 42.575 -4.922 17.979 1.00 45.77 N
ATOM 17 C5 A B 5 43.806 -5.557 17.961 1.00 45.48 C
ATOM 18 C6 A B 5 45.071 -5.194 18.478 1.00 45.33 C
ATOM 19 N6 A B 5 45.289 -4.052 19.141 1.00 45.19 N
ATOM 20 N1 A B 5 46.103 -6.051 18.289 1.00 45.31 N
ATOM 21 C2 A B 5 45.881 -7.195 17.626 1.00 45.24 C
ATOM 22 N3 A B 5 44.737 -7.638 17.097 1.00 45.27 N
ATOM 23 C4 A B 5 43.725 -6.770 17.295 1.00 45.22 C
ATOM 24 P A B 6 40.348 -12.076 18.434 1.00 47.19 P
ATOM 25 OP1 A B 6 39.620 -11.291 19.457 1.00 47.28 O
ATOM 26 OP2 A B 6 39.883 -13.440 18.089 1.00 47.09 O
ATOM 27 O5' A B 6 41.895 -12.164 18.861 1.00 48.74 O
TER
ATOM 2 P U A 4 35.977 -5.218 12.212 1.00 21.25 P
ATOM 3 OP1 U A 4 34.707 -4.457 12.282 1.00 20.99 O
ATOM 4 OP2 U A 4 35.961 -6.682 12.021 1.00 22.80 O
ATOM 5 O5' U A 4 36.846 -4.870 13.500 1.00 24.21 O
ATOM 6 C5' U A 4 37.980 -5.638 13.849 1.00 29.05 C
ATOM 7 C4' U A 4 38.586 -5.013 15.083 1.00 32.49 C
ATOM 8 O4' U A 4 38.684 -3.582 14.854 1.00 34.16 O
ATOM 9 C3' U A 4 37.703 -5.215 16.314 1.00 34.85 C
ATOM 10 O3' U A 4 38.411 -5.864 17.378 1.00 36.84 O
ATOM 11 C2' U A 4 37.197 -3.810 16.643 1.00 35.02 C
ATOM 12 O2' U A 4 37.035 -3.519 18.016 1.00 35.95 O
ATOM 13 C1' U A 4 38.285 -2.932 16.035 1.00 35.24 C
ATOM 14 N1 U A 4 37.734 -1.587 15.774 1.00 35.38 N
ATOM 15 C2 U A 4 38.376 -0.492 16.321 1.00 35.75 C
ATOM 16 O2 U A 4 39.399 -0.565 16.977 1.00 35.73 O
ATOM 17 N3 U A 4 37.774 0.712 16.055 1.00 35.49 N
ATOM 18 C4 U A 4 36.611 0.907 15.329 1.00 35.48 C
ATOM 19 O4 U A 4 36.188 2.044 15.174 1.00 35.82 O
ATOM 20 C5 U A 4 35.991 -0.283 14.800 1.00 35.41 C
ATOM 21 C6 U A 4 36.563 -1.465 15.045 1.00 35.15 C
ATOM 22 P A A 5 37.640 -6.927 18.306 1.00 38.70 P
ATOM 23 OP1 A A 5 38.030 -6.625 19.703 1.00 38.49 O
ATOM 24 OP2 A A 5 36.209 -6.945 17.915 1.00 39.22 O
ATOM 25 O5' A A 5 38.246 -8.355 17.907 1.00 40.01 O
TER
ATOM 1 O3' U B 4 38.411 -5.864 17.378 1.00 36.84 O
ATOM 2 P A B 5 37.640 -6.927 18.306 1.00 38.70 P
ATOM 3 OP1 A B 5 38.030 -6.625 19.703 1.00 38.49 O
ATOM 4 OP2 A B 5 36.209 -6.945 17.915 1.00 39.22 O
ATOM 5 O5' A B 5 38.246 -8.355 17.907 1.00 40.01 O
ATOM 6 C5' A B 5 38.282 -8.837 16.562 1.00 41.36 C
ATOM 7 C4' A B 5 39.720 -9.050 16.134 1.00 43.07 C
ATOM 8 O4' A B 5 40.377 -7.768 16.068 1.00 43.28 O
ATOM 9 C3' A B 5 40.599 -9.803 17.122 1.00 44.39 C
ATOM 10 O3' A B 5 40.377 -11.216 17.076 1.00 46.29 O
ATOM 11 C2' A B 5 42.006 -9.398 16.685 1.00 44.48 C
ATOM 12 O2' A B 5 42.569 -10.241 15.688 1.00 43.46 O
ATOM 13 C1' A B 5 41.778 -7.983 16.143 1.00 44.83 C
ATOM 14 N9 A B 5 42.404 -6.890 16.900 1.00 45.14 N
ATOM 15 C8 A B 5 41.784 -5.749 17.336 1.00 45.33 C
ATOM 16 N7 A B 5 42.575 -4.922 17.979 1.00 45.77 N
ATOM 17 C5 A B 5 43.806 -5.557 17.961 1.00 45.48 C
ATOM 18 C6 A B 5 45.071 -5.194 18.478 1.00 45.33 C
ATOM 19 N6 A B 5 45.289 -4.052 19.141 1.00 45.19 N
ATOM 20 N1 A B 5 46.103 -6.051 18.289 1.00 45.31 N
ATOM 21 C2 A B 5 45.881 -7.195 17.626 1.00 45.24 C
ATOM 22 N3 A B 5 44.737 -7.638 17.097 1.00 45.27 N
ATOM 23 C4 A B 5 43.725 -6.770 17.295 1.00 45.22 C
ATOM 24 P A B 6 40.348 -12.076 18.434 1.00 47.19 P
ATOM 25 OP1 A B 6 39.620 -11.291 19.457 1.00 47.28 O
ATOM 26 OP2 A B 6 39.883 -13.440 18.089 1.00 47.09 O
ATOM 27 O5' A B 6 41.895 -12.164 18.861 1.00 48.74 O
TER
Atoms:
C4: (36.611,0.907,15.329)
N3: (37.774,0.712,16.055)
OP1: (34.707,-4.457,12.282)
OP2: (35.961,-6.682,12.021)
C2: (38.376,-0.492,16.321)
C1': (38.285,-2.932,16.035)
C3': (37.703,-5.215,16.314)
O5': (36.846,-4.870,13.500)
O4': (38.684,-3.582,14.854)
C5': (37.980,-5.638,13.849)
P: (35.977,-5.218,12.212)
C4': (38.586,-5.013,15.083)
C2': (37.197,-3.810,16.643)
O2': (37.035,-3.519,18.016)
N1: (37.734,-1.587,15.774)
O4: (36.188,2.044,15.174)
O2: (39.399,-0.565,16.977)
C6: (36.563,-1.465,15.045)
C5: (35.991,-0.283,14.800)
O3': (38.411,-5.864,17.378)
N3: (37.774,0.712,16.055)
OP1: (34.707,-4.457,12.282)
OP2: (35.961,-6.682,12.021)
C2: (38.376,-0.492,16.321)
C1': (38.285,-2.932,16.035)
C3': (37.703,-5.215,16.314)
O5': (36.846,-4.870,13.500)
O4': (38.684,-3.582,14.854)
C5': (37.980,-5.638,13.849)
P: (35.977,-5.218,12.212)
C4': (38.586,-5.013,15.083)
C2': (37.197,-3.810,16.643)
O2': (37.035,-3.519,18.016)
N1: (37.734,-1.587,15.774)
O4: (36.188,2.044,15.174)
O2: (39.399,-0.565,16.977)
C6: (36.563,-1.465,15.045)
C5: (35.991,-0.283,14.800)
O3': (38.411,-5.864,17.378)
OP1: (38.030,-6.625,19.703)
OP2: (36.209,-6.945,17.915)
C3': (40.599,-9.803,17.122)
C1': (41.778,-7.983,16.143)
C5': (38.282,-8.837,16.562)
O4': (40.377,-7.768,16.068)
C8: (41.784,-5.749,17.336)
O2': (42.569,-10.241,15.688)
C6: (45.071,-5.194,18.478)
C5: (43.806,-5.557,17.961)
C4: (43.725,-6.770,17.295)
P: (37.640,-6.927,18.306)
C4': (39.720,-9.050,16.134)
C2': (42.006,-9.398,16.685)
C2: (45.881,-7.195,17.626)
N1: (46.103,-6.051,18.289)
N3: (44.737,-7.638,17.097)
N6: (45.289,-4.052,19.141)
N7: (42.575,-4.922,17.979)
N9: (42.404,-6.890,16.900)
O5': (38.246,-8.355,17.907)
O3': (40.377,-11.216,17.076)
OP2: (36.209,-6.945,17.915)
C3': (40.599,-9.803,17.122)
C1': (41.778,-7.983,16.143)
C5': (38.282,-8.837,16.562)
O4': (40.377,-7.768,16.068)
C8: (41.784,-5.749,17.336)
O2': (42.569,-10.241,15.688)
C6: (45.071,-5.194,18.478)
C5: (43.806,-5.557,17.961)
C4: (43.725,-6.770,17.295)
P: (37.640,-6.927,18.306)
C4': (39.720,-9.050,16.134)
C2': (42.006,-9.398,16.685)
C2: (45.881,-7.195,17.626)
N1: (46.103,-6.051,18.289)
N3: (44.737,-7.638,17.097)
N6: (45.289,-4.052,19.141)
N7: (42.575,-4.922,17.979)
N9: (42.404,-6.890,16.900)
O5': (38.246,-8.355,17.907)
O3': (40.377,-11.216,17.076)
Image (generated by PyMOL):