Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:02688:02746
Extra
PDB:
ATOM 1 O3' G A2687 32.280 182.884 122.974 1.00 69.11 O
ATOM 2 P U A2688 30.767 183.145 123.438 1.00 69.09 P
ATOM 3 OP1 U A2688 30.458 182.246 124.584 1.00 68.27 O
ATOM 4 OP2 U A2688 29.903 183.125 122.228 1.00 67.52 O
ATOM 5 O5' U A2688 30.813 184.639 123.979 1.00 72.44 O
ATOM 6 C5' U A2688 31.399 184.948 125.262 1.00 77.41 C
ATOM 7 C4' U A2688 31.628 186.435 125.382 1.00 80.51 C
ATOM 8 O4' U A2688 32.758 186.826 124.549 1.00 80.82 O
ATOM 9 C3' U A2688 30.446 187.280 124.923 1.00 83.32 C
ATOM 10 O3' U A2688 30.346 188.461 125.702 1.00 87.11 O
ATOM 11 C2' U A2688 30.819 187.617 123.484 1.00 83.48 C
ATOM 12 O2' U A2688 30.197 188.786 122.984 1.00 84.85 O
ATOM 13 C1' U A2688 32.335 187.780 123.595 1.00 82.04 C
ATOM 14 N1 U A2688 33.022 187.507 122.327 1.00 80.83 N
ATOM 15 C2 U A2688 33.693 188.548 121.712 1.00 81.14 C
ATOM 16 O2 U A2688 33.761 189.671 122.187 1.00 81.44 O
ATOM 17 N3 U A2688 34.285 188.225 120.514 1.00 81.37 N
ATOM 18 C4 U A2688 34.276 186.991 119.888 1.00 81.45 C
ATOM 19 O4 U A2688 34.861 186.848 118.816 1.00 81.15 O
ATOM 20 C5 U A2688 33.570 185.971 120.593 1.00 82.08 C
ATOM 21 C6 U A2688 32.986 186.254 121.760 1.00 81.48 C
ATOM 22 P C A2689 28.985 188.773 126.496 1.00 89.79 P
ATOM 23 OP1 C A2689 28.033 187.642 126.298 1.00 89.21 O
ATOM 24 OP2 C A2689 28.574 190.150 126.114 1.00 88.72 O
ATOM 25 O5' C A2689 29.445 188.778 128.021 1.00 89.57 O
TER
ATOM 1 O3' A B2745 33.889 182.852 116.573 1.00 68.53 O
ATOM 2 P C B2746 32.407 182.912 117.192 1.00 70.82 P
ATOM 3 OP1 C B2746 32.477 183.354 118.609 1.00 69.89 O
ATOM 4 OP2 C B2746 31.732 181.635 116.859 1.00 69.72 O
ATOM 5 O5' C B2746 31.708 184.082 116.368 1.00 72.95 O
ATOM 6 C5' C B2746 31.863 185.460 116.766 1.00 76.97 C
ATOM 7 C4' C B2746 31.882 186.349 115.550 1.00 79.85 C
ATOM 8 O4' C B2746 33.005 185.963 114.716 1.00 79.47 O
ATOM 9 C3' C B2746 30.670 186.224 114.635 1.00 81.78 C
ATOM 10 O3' C B2746 29.573 187.033 115.068 1.00 84.41 O
ATOM 11 C2' C B2746 31.237 186.658 113.290 1.00 81.04 C
ATOM 12 O2' C B2746 31.367 188.058 113.167 1.00 82.18 O
ATOM 13 C1' C B2746 32.634 186.041 113.350 1.00 80.44 C
ATOM 14 N1 C B2746 32.682 184.685 112.780 1.00 80.73 N
ATOM 15 C2 C B2746 32.756 184.539 111.389 1.00 81.01 C
ATOM 16 O2 C B2746 32.775 185.555 110.673 1.00 80.67 O
ATOM 17 N3 C B2746 32.802 183.294 110.859 1.00 81.50 N
ATOM 18 C4 C B2746 32.775 182.224 111.659 1.00 81.94 C
ATOM 19 N4 C B2746 32.823 181.015 111.090 1.00 82.60 N
ATOM 20 C5 C B2746 32.697 182.345 113.077 1.00 81.15 C
ATOM 21 C6 C B2746 32.653 183.581 113.590 1.00 80.62 C
ATOM 22 P A B2747 28.073 186.459 114.971 1.00 87.25 P
ATOM 23 OP1 A B2747 27.128 187.558 115.289 1.00 88.03 O
ATOM 24 OP2 A B2747 27.992 185.185 115.732 1.00 86.96 O
ATOM 25 O5' A B2747 27.904 186.118 113.430 1.00 89.08 O
TER
ATOM 2 P U A2688 30.767 183.145 123.438 1.00 69.09 P
ATOM 3 OP1 U A2688 30.458 182.246 124.584 1.00 68.27 O
ATOM 4 OP2 U A2688 29.903 183.125 122.228 1.00 67.52 O
ATOM 5 O5' U A2688 30.813 184.639 123.979 1.00 72.44 O
ATOM 6 C5' U A2688 31.399 184.948 125.262 1.00 77.41 C
ATOM 7 C4' U A2688 31.628 186.435 125.382 1.00 80.51 C
ATOM 8 O4' U A2688 32.758 186.826 124.549 1.00 80.82 O
ATOM 9 C3' U A2688 30.446 187.280 124.923 1.00 83.32 C
ATOM 10 O3' U A2688 30.346 188.461 125.702 1.00 87.11 O
ATOM 11 C2' U A2688 30.819 187.617 123.484 1.00 83.48 C
ATOM 12 O2' U A2688 30.197 188.786 122.984 1.00 84.85 O
ATOM 13 C1' U A2688 32.335 187.780 123.595 1.00 82.04 C
ATOM 14 N1 U A2688 33.022 187.507 122.327 1.00 80.83 N
ATOM 15 C2 U A2688 33.693 188.548 121.712 1.00 81.14 C
ATOM 16 O2 U A2688 33.761 189.671 122.187 1.00 81.44 O
ATOM 17 N3 U A2688 34.285 188.225 120.514 1.00 81.37 N
ATOM 18 C4 U A2688 34.276 186.991 119.888 1.00 81.45 C
ATOM 19 O4 U A2688 34.861 186.848 118.816 1.00 81.15 O
ATOM 20 C5 U A2688 33.570 185.971 120.593 1.00 82.08 C
ATOM 21 C6 U A2688 32.986 186.254 121.760 1.00 81.48 C
ATOM 22 P C A2689 28.985 188.773 126.496 1.00 89.79 P
ATOM 23 OP1 C A2689 28.033 187.642 126.298 1.00 89.21 O
ATOM 24 OP2 C A2689 28.574 190.150 126.114 1.00 88.72 O
ATOM 25 O5' C A2689 29.445 188.778 128.021 1.00 89.57 O
TER
ATOM 1 O3' A B2745 33.889 182.852 116.573 1.00 68.53 O
ATOM 2 P C B2746 32.407 182.912 117.192 1.00 70.82 P
ATOM 3 OP1 C B2746 32.477 183.354 118.609 1.00 69.89 O
ATOM 4 OP2 C B2746 31.732 181.635 116.859 1.00 69.72 O
ATOM 5 O5' C B2746 31.708 184.082 116.368 1.00 72.95 O
ATOM 6 C5' C B2746 31.863 185.460 116.766 1.00 76.97 C
ATOM 7 C4' C B2746 31.882 186.349 115.550 1.00 79.85 C
ATOM 8 O4' C B2746 33.005 185.963 114.716 1.00 79.47 O
ATOM 9 C3' C B2746 30.670 186.224 114.635 1.00 81.78 C
ATOM 10 O3' C B2746 29.573 187.033 115.068 1.00 84.41 O
ATOM 11 C2' C B2746 31.237 186.658 113.290 1.00 81.04 C
ATOM 12 O2' C B2746 31.367 188.058 113.167 1.00 82.18 O
ATOM 13 C1' C B2746 32.634 186.041 113.350 1.00 80.44 C
ATOM 14 N1 C B2746 32.682 184.685 112.780 1.00 80.73 N
ATOM 15 C2 C B2746 32.756 184.539 111.389 1.00 81.01 C
ATOM 16 O2 C B2746 32.775 185.555 110.673 1.00 80.67 O
ATOM 17 N3 C B2746 32.802 183.294 110.859 1.00 81.50 N
ATOM 18 C4 C B2746 32.775 182.224 111.659 1.00 81.94 C
ATOM 19 N4 C B2746 32.823 181.015 111.090 1.00 82.60 N
ATOM 20 C5 C B2746 32.697 182.345 113.077 1.00 81.15 C
ATOM 21 C6 C B2746 32.653 183.581 113.590 1.00 80.62 C
ATOM 22 P A B2747 28.073 186.459 114.971 1.00 87.25 P
ATOM 23 OP1 A B2747 27.128 187.558 115.289 1.00 88.03 O
ATOM 24 OP2 A B2747 27.992 185.185 115.732 1.00 86.96 O
ATOM 25 O5' A B2747 27.904 186.118 113.430 1.00 89.08 O
TER
Atoms:
C4: (34.276,186.991,119.888)
N3: (34.285,188.225,120.514)
OP1: (30.458,182.246,124.584)
OP2: (29.903,183.125,122.228)
C2: (33.693,188.548,121.712)
C1': (32.335,187.780,123.595)
C3': (30.446,187.280,124.923)
O5': (30.813,184.639,123.979)
O4': (32.758,186.826,124.549)
C5': (31.399,184.948,125.262)
P: (30.767,183.145,123.438)
C4': (31.628,186.435,125.382)
C2': (30.819,187.617,123.484)
O2': (30.197,188.786,122.984)
N1: (33.022,187.507,122.327)
O4: (34.861,186.848,118.816)
O2: (33.761,189.671,122.187)
C6: (32.986,186.254,121.760)
C5: (33.570,185.971,120.593)
O3': (30.346,188.461,125.702)
N3: (34.285,188.225,120.514)
OP1: (30.458,182.246,124.584)
OP2: (29.903,183.125,122.228)
C2: (33.693,188.548,121.712)
C1': (32.335,187.780,123.595)
C3': (30.446,187.280,124.923)
O5': (30.813,184.639,123.979)
O4': (32.758,186.826,124.549)
C5': (31.399,184.948,125.262)
P: (30.767,183.145,123.438)
C4': (31.628,186.435,125.382)
C2': (30.819,187.617,123.484)
O2': (30.197,188.786,122.984)
N1: (33.022,187.507,122.327)
O4: (34.861,186.848,118.816)
O2: (33.761,189.671,122.187)
C6: (32.986,186.254,121.760)
C5: (33.570,185.971,120.593)
O3': (30.346,188.461,125.702)
C2: (32.756,184.539,111.389)
OP1: (32.477,183.354,118.609)
OP2: (31.732,181.635,116.859)
C4: (32.775,182.224,111.659)
O5': (31.708,184.082,116.368)
C3': (30.670,186.224,114.635)
C1': (32.634,186.041,113.350)
O4': (33.005,185.963,114.716)
C5': (31.863,185.460,116.766)
P: (32.407,182.912,117.192)
O2: (32.775,185.555,110.673)
C4': (31.882,186.349,115.550)
C2': (31.237,186.658,113.290)
O2': (31.367,188.058,113.167)
N1: (32.682,184.685,112.780)
N3: (32.802,183.294,110.859)
N4: (32.823,181.015,111.090)
C6: (32.653,183.581,113.590)
C5: (32.697,182.345,113.077)
O3': (29.573,187.033,115.068)
OP1: (32.477,183.354,118.609)
OP2: (31.732,181.635,116.859)
C4: (32.775,182.224,111.659)
O5': (31.708,184.082,116.368)
C3': (30.670,186.224,114.635)
C1': (32.634,186.041,113.350)
O4': (33.005,185.963,114.716)
C5': (31.863,185.460,116.766)
P: (32.407,182.912,117.192)
O2: (32.775,185.555,110.673)
C4': (31.882,186.349,115.550)
C2': (31.237,186.658,113.290)
O2': (31.367,188.058,113.167)
N1: (32.682,184.685,112.780)
N3: (32.802,183.294,110.859)
N4: (32.823,181.015,111.090)
C6: (32.653,183.581,113.590)
C5: (32.697,182.345,113.077)
O3': (29.573,187.033,115.068)
Image (generated by PyMOL):