Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0153:0154
Extra
PDB:
ATOM 1 O3' G A 152 64.647 102.411 63.739 1.00 34.95 O
ATOM 2 P A A 153 65.220 101.750 65.076 1.00 35.26 P
ATOM 3 OP1 A A 153 64.133 101.048 65.794 1.00 32.75 O
ATOM 4 OP2 A A 153 65.959 102.838 65.753 1.00 36.28 O
ATOM 5 O5' A A 153 66.263 100.673 64.539 1.00 33.53 O
ATOM 6 C5' A A 153 65.845 99.635 63.636 1.00 33.63 C
ATOM 7 C4' A A 153 67.027 98.807 63.179 1.00 34.17 C
ATOM 8 O4' A A 153 67.925 99.624 62.391 1.00 34.99 O
ATOM 9 C3' A A 153 67.903 98.184 64.254 1.00 34.00 C
ATOM 10 O3' A A 153 67.297 96.970 64.715 1.00 33.38 O
ATOM 11 C2' A A 153 69.219 97.971 63.508 1.00 34.58 C
ATOM 12 O2' A A 153 69.212 96.830 62.672 1.00 37.17 O
ATOM 13 C1' A A 153 69.260 99.204 62.604 1.00 35.66 C
ATOM 14 N9 A A 153 70.020 100.328 63.152 1.00 37.70 N
ATOM 15 C8 A A 153 69.588 101.323 64.000 1.00 39.31 C
ATOM 16 N7 A A 153 70.523 102.179 64.329 1.00 39.32 N
ATOM 17 C5 A A 153 71.647 101.722 63.651 1.00 38.99 C
ATOM 18 C6 A A 153 72.980 102.180 63.599 1.00 37.83 C
ATOM 19 N6 A A 153 73.430 103.234 64.274 1.00 39.90 N
ATOM 20 N1 A A 153 73.845 101.500 62.829 1.00 37.04 N
ATOM 21 C2 A A 153 73.406 100.430 62.166 1.00 38.32 C
ATOM 22 N3 A A 153 72.189 99.893 62.138 1.00 38.39 N
ATOM 23 C4 A A 153 71.347 100.593 62.913 1.00 38.03 C
ATOM 24 P A A 154 68.015 96.060 65.841 1.00 37.32 P
ATOM 25 OP1 A A 154 69.462 95.873 65.523 1.00 34.16 O
ATOM 26 OP2 A A 154 67.140 94.860 65.991 1.00 36.20 O
ATOM 27 O5' A A 154 67.919 96.912 67.183 1.00 33.89 O
TER
ATOM 1 O3' A B 153 67.297 96.970 64.715 1.00 33.38 O
ATOM 2 P A B 154 68.015 96.060 65.841 1.00 37.32 P
ATOM 3 OP1 A B 154 69.462 95.873 65.523 1.00 34.16 O
ATOM 4 OP2 A B 154 67.140 94.860 65.991 1.00 36.20 O
ATOM 5 O5' A B 154 67.919 96.912 67.183 1.00 33.89 O
ATOM 6 C5' A B 154 66.656 97.165 67.820 1.00 34.49 C
ATOM 7 C4' A B 154 66.380 98.643 67.816 1.00 35.46 C
ATOM 8 O4' A B 154 65.027 98.862 68.285 1.00 35.50 O
ATOM 9 C3' A B 154 67.288 99.517 68.686 1.00 35.68 C
ATOM 10 O3' A B 154 67.735 100.672 67.971 1.00 35.48 O
ATOM 11 C2' A B 154 66.366 99.926 69.833 1.00 33.54 C
ATOM 12 O2' A B 154 66.655 101.202 70.340 1.00 33.21 O
ATOM 13 C1' A B 154 65.011 99.970 69.143 1.00 33.46 C
ATOM 14 N9 A B 154 63.902 99.807 70.076 1.00 30.98 N
ATOM 15 C8 A B 154 62.824 100.634 70.238 1.00 31.74 C
ATOM 16 N7 A B 154 62.002 100.248 71.181 1.00 32.73 N
ATOM 17 C5 A B 154 62.579 99.083 71.666 1.00 30.66 C
ATOM 18 C6 A B 154 62.205 98.204 72.686 1.00 31.89 C
ATOM 19 N6 A B 154 61.108 98.368 73.437 1.00 33.73 N
ATOM 20 N1 A B 154 63.002 97.138 72.920 1.00 30.23 N
ATOM 21 C2 A B 154 64.095 96.985 72.175 1.00 30.63 C
ATOM 22 N3 A B 154 64.552 97.747 71.188 1.00 31.20 N
ATOM 23 C4 A B 154 63.739 98.793 70.985 1.00 29.56 C
ATOM 24 P A B 155 69.300 100.825 67.600 1.00 36.98 P
ATOM 25 OP1 A B 155 69.444 102.151 66.954 1.00 34.86 O
ATOM 26 OP2 A B 155 69.775 99.615 66.890 1.00 36.12 O
ATOM 27 O5' A B 155 70.065 100.823 68.998 1.00 35.10 O
TER
ATOM 2 P A A 153 65.220 101.750 65.076 1.00 35.26 P
ATOM 3 OP1 A A 153 64.133 101.048 65.794 1.00 32.75 O
ATOM 4 OP2 A A 153 65.959 102.838 65.753 1.00 36.28 O
ATOM 5 O5' A A 153 66.263 100.673 64.539 1.00 33.53 O
ATOM 6 C5' A A 153 65.845 99.635 63.636 1.00 33.63 C
ATOM 7 C4' A A 153 67.027 98.807 63.179 1.00 34.17 C
ATOM 8 O4' A A 153 67.925 99.624 62.391 1.00 34.99 O
ATOM 9 C3' A A 153 67.903 98.184 64.254 1.00 34.00 C
ATOM 10 O3' A A 153 67.297 96.970 64.715 1.00 33.38 O
ATOM 11 C2' A A 153 69.219 97.971 63.508 1.00 34.58 C
ATOM 12 O2' A A 153 69.212 96.830 62.672 1.00 37.17 O
ATOM 13 C1' A A 153 69.260 99.204 62.604 1.00 35.66 C
ATOM 14 N9 A A 153 70.020 100.328 63.152 1.00 37.70 N
ATOM 15 C8 A A 153 69.588 101.323 64.000 1.00 39.31 C
ATOM 16 N7 A A 153 70.523 102.179 64.329 1.00 39.32 N
ATOM 17 C5 A A 153 71.647 101.722 63.651 1.00 38.99 C
ATOM 18 C6 A A 153 72.980 102.180 63.599 1.00 37.83 C
ATOM 19 N6 A A 153 73.430 103.234 64.274 1.00 39.90 N
ATOM 20 N1 A A 153 73.845 101.500 62.829 1.00 37.04 N
ATOM 21 C2 A A 153 73.406 100.430 62.166 1.00 38.32 C
ATOM 22 N3 A A 153 72.189 99.893 62.138 1.00 38.39 N
ATOM 23 C4 A A 153 71.347 100.593 62.913 1.00 38.03 C
ATOM 24 P A A 154 68.015 96.060 65.841 1.00 37.32 P
ATOM 25 OP1 A A 154 69.462 95.873 65.523 1.00 34.16 O
ATOM 26 OP2 A A 154 67.140 94.860 65.991 1.00 36.20 O
ATOM 27 O5' A A 154 67.919 96.912 67.183 1.00 33.89 O
TER
ATOM 1 O3' A B 153 67.297 96.970 64.715 1.00 33.38 O
ATOM 2 P A B 154 68.015 96.060 65.841 1.00 37.32 P
ATOM 3 OP1 A B 154 69.462 95.873 65.523 1.00 34.16 O
ATOM 4 OP2 A B 154 67.140 94.860 65.991 1.00 36.20 O
ATOM 5 O5' A B 154 67.919 96.912 67.183 1.00 33.89 O
ATOM 6 C5' A B 154 66.656 97.165 67.820 1.00 34.49 C
ATOM 7 C4' A B 154 66.380 98.643 67.816 1.00 35.46 C
ATOM 8 O4' A B 154 65.027 98.862 68.285 1.00 35.50 O
ATOM 9 C3' A B 154 67.288 99.517 68.686 1.00 35.68 C
ATOM 10 O3' A B 154 67.735 100.672 67.971 1.00 35.48 O
ATOM 11 C2' A B 154 66.366 99.926 69.833 1.00 33.54 C
ATOM 12 O2' A B 154 66.655 101.202 70.340 1.00 33.21 O
ATOM 13 C1' A B 154 65.011 99.970 69.143 1.00 33.46 C
ATOM 14 N9 A B 154 63.902 99.807 70.076 1.00 30.98 N
ATOM 15 C8 A B 154 62.824 100.634 70.238 1.00 31.74 C
ATOM 16 N7 A B 154 62.002 100.248 71.181 1.00 32.73 N
ATOM 17 C5 A B 154 62.579 99.083 71.666 1.00 30.66 C
ATOM 18 C6 A B 154 62.205 98.204 72.686 1.00 31.89 C
ATOM 19 N6 A B 154 61.108 98.368 73.437 1.00 33.73 N
ATOM 20 N1 A B 154 63.002 97.138 72.920 1.00 30.23 N
ATOM 21 C2 A B 154 64.095 96.985 72.175 1.00 30.63 C
ATOM 22 N3 A B 154 64.552 97.747 71.188 1.00 31.20 N
ATOM 23 C4 A B 154 63.739 98.793 70.985 1.00 29.56 C
ATOM 24 P A B 155 69.300 100.825 67.600 1.00 36.98 P
ATOM 25 OP1 A B 155 69.444 102.151 66.954 1.00 34.86 O
ATOM 26 OP2 A B 155 69.775 99.615 66.890 1.00 36.12 O
ATOM 27 O5' A B 155 70.065 100.823 68.998 1.00 35.10 O
TER
Atoms:
OP1: (64.133,101.048,65.794)
OP2: (65.959,102.838,65.753)
C3': (67.903,98.184,64.254)
C1': (69.260,99.204,62.604)
C5': (65.845,99.635,63.636)
O4': (67.925,99.624,62.391)
C8: (69.588,101.323,64.000)
O2': (69.212,96.830,62.672)
C6: (72.980,102.180,63.599)
C5: (71.647,101.722,63.651)
C4: (71.347,100.593,62.913)
P: (65.220,101.750,65.076)
C4': (67.027,98.807,63.179)
C2': (69.219,97.971,63.508)
C2: (73.406,100.430,62.166)
N1: (73.845,101.500,62.829)
N3: (72.189,99.893,62.138)
N6: (73.430,103.234,64.274)
N7: (70.523,102.179,64.329)
N9: (70.020,100.328,63.152)
O5': (66.263,100.673,64.539)
O3': (67.297,96.970,64.715)
OP2: (65.959,102.838,65.753)
C3': (67.903,98.184,64.254)
C1': (69.260,99.204,62.604)
C5': (65.845,99.635,63.636)
O4': (67.925,99.624,62.391)
C8: (69.588,101.323,64.000)
O2': (69.212,96.830,62.672)
C6: (72.980,102.180,63.599)
C5: (71.647,101.722,63.651)
C4: (71.347,100.593,62.913)
P: (65.220,101.750,65.076)
C4': (67.027,98.807,63.179)
C2': (69.219,97.971,63.508)
C2: (73.406,100.430,62.166)
N1: (73.845,101.500,62.829)
N3: (72.189,99.893,62.138)
N6: (73.430,103.234,64.274)
N7: (70.523,102.179,64.329)
N9: (70.020,100.328,63.152)
O5': (66.263,100.673,64.539)
O3': (67.297,96.970,64.715)
OP1: (69.462,95.873,65.523)
OP2: (67.140,94.860,65.991)
C3': (67.288,99.517,68.686)
C1': (65.011,99.970,69.143)
C5': (66.656,97.165,67.820)
O4': (65.027,98.862,68.285)
C8: (62.824,100.634,70.238)
O2': (66.655,101.202,70.340)
C6: (62.205,98.204,72.686)
C5: (62.579,99.083,71.666)
C4: (63.739,98.793,70.985)
P: (68.015,96.060,65.841)
C4': (66.380,98.643,67.816)
C2': (66.366,99.926,69.833)
C2: (64.095,96.985,72.175)
N1: (63.002,97.138,72.920)
N3: (64.552,97.747,71.188)
N6: (61.108,98.368,73.437)
N7: (62.002,100.248,71.181)
N9: (63.902,99.807,70.076)
O5': (67.919,96.912,67.183)
O3': (67.735,100.672,67.971)
OP2: (67.140,94.860,65.991)
C3': (67.288,99.517,68.686)
C1': (65.011,99.970,69.143)
C5': (66.656,97.165,67.820)
O4': (65.027,98.862,68.285)
C8: (62.824,100.634,70.238)
O2': (66.655,101.202,70.340)
C6: (62.205,98.204,72.686)
C5: (62.579,99.083,71.666)
C4: (63.739,98.793,70.985)
P: (68.015,96.060,65.841)
C4': (66.380,98.643,67.816)
C2': (66.366,99.926,69.833)
C2: (64.095,96.985,72.175)
N1: (63.002,97.138,72.920)
N3: (64.552,97.747,71.188)
N6: (61.108,98.368,73.437)
N7: (62.002,100.248,71.181)
N9: (63.902,99.807,70.076)
O5': (67.919,96.912,67.183)
O3': (67.735,100.672,67.971)
Image (generated by PyMOL):