Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0153:0154
Extra
PDB:
ATOM 1 O3' G A 152 64.483 102.194 63.410 1.00 37.44 O
ATOM 2 P A A 153 65.055 101.537 64.749 1.00 38.28 P
ATOM 3 OP1 A A 153 63.923 100.892 65.441 1.00 37.95 O
ATOM 4 OP2 A A 153 65.842 102.573 65.452 1.00 39.68 O
ATOM 5 O5' A A 153 66.064 100.423 64.225 1.00 35.60 O
ATOM 6 C5' A A 153 65.600 99.329 63.431 1.00 34.22 C
ATOM 7 C4' A A 153 66.768 98.544 62.891 1.00 34.69 C
ATOM 8 O4' A A 153 67.606 99.415 62.096 1.00 35.37 O
ATOM 9 C3' A A 153 67.710 97.939 63.916 1.00 34.49 C
ATOM 10 O3' A A 153 67.159 96.701 64.367 1.00 37.10 O
ATOM 11 C2' A A 153 68.990 97.772 63.102 1.00 34.81 C
ATOM 12 O2' A A 153 68.960 96.660 62.230 1.00 35.98 O
ATOM 13 C1' A A 153 68.962 99.030 62.235 1.00 34.65 C
ATOM 14 N9 A A 153 69.703 100.151 62.810 1.00 33.82 N
ATOM 15 C8 A A 153 69.233 101.136 63.647 1.00 35.19 C
ATOM 16 N7 A A 153 70.148 101.997 64.015 1.00 34.58 N
ATOM 17 C5 A A 153 71.297 101.556 63.373 1.00 32.89 C
ATOM 18 C6 A A 153 72.613 102.035 63.361 1.00 31.10 C
ATOM 19 N6 A A 153 73.010 103.111 64.039 1.00 34.15 N
ATOM 20 N1 A A 153 73.520 101.364 62.624 1.00 27.23 N
ATOM 21 C2 A A 153 73.122 100.291 61.948 1.00 27.08 C
ATOM 22 N3 A A 153 71.918 99.740 61.878 1.00 29.41 N
ATOM 23 C4 A A 153 71.038 100.426 62.624 1.00 32.02 C
ATOM 24 P A A 154 67.923 95.815 65.474 1.00 37.47 P
ATOM 25 OP1 A A 154 69.354 95.655 65.105 1.00 36.15 O
ATOM 26 OP2 A A 154 67.080 94.613 65.646 1.00 38.87 O
ATOM 27 O5' A A 154 67.834 96.677 66.810 1.00 35.71 O
TER
ATOM 1 O3' A B 153 67.159 96.701 64.367 1.00 37.10 O
ATOM 2 P A B 154 67.923 95.815 65.474 1.00 37.47 P
ATOM 3 OP1 A B 154 69.354 95.655 65.105 1.00 36.15 O
ATOM 4 OP2 A B 154 67.080 94.613 65.646 1.00 38.87 O
ATOM 5 O5' A B 154 67.834 96.677 66.810 1.00 35.71 O
ATOM 6 C5' A B 154 66.573 96.949 67.440 1.00 32.85 C
ATOM 7 C4' A B 154 66.299 98.424 67.396 1.00 32.37 C
ATOM 8 O4' A B 154 64.942 98.656 67.856 1.00 32.86 O
ATOM 9 C3' A B 154 67.205 99.303 68.257 1.00 33.13 C
ATOM 10 O3' A B 154 67.603 100.476 67.542 1.00 33.27 O
ATOM 11 C2' A B 154 66.293 99.684 69.424 1.00 32.71 C
ATOM 12 O2' A B 154 66.620 100.934 69.994 1.00 31.97 O
ATOM 13 C1' A B 154 64.932 99.746 68.740 1.00 32.39 C
ATOM 14 N9 A B 154 63.785 99.602 69.638 1.00 33.25 N
ATOM 15 C8 A B 154 62.681 100.416 69.708 1.00 33.63 C
ATOM 16 N7 A B 154 61.820 100.064 70.632 1.00 32.55 N
ATOM 17 C5 A B 154 62.391 98.939 71.206 1.00 34.44 C
ATOM 18 C6 A B 154 61.979 98.101 72.256 1.00 34.44 C
ATOM 19 N6 A B 154 60.838 98.267 72.932 1.00 36.10 N
ATOM 20 N1 A B 154 62.786 97.073 72.593 1.00 32.66 N
ATOM 21 C2 A B 154 63.921 96.899 71.911 1.00 33.94 C
ATOM 22 N3 A B 154 64.415 97.610 70.900 1.00 35.73 N
ATOM 23 C4 A B 154 63.596 98.634 70.596 1.00 34.77 C
ATOM 24 P A B 155 69.159 100.711 67.187 1.00 32.04 P
ATOM 25 OP1 A B 155 69.287 102.090 66.679 1.00 33.25 O
ATOM 26 OP2 A B 155 69.648 99.593 66.358 1.00 34.63 O
ATOM 27 O5' A B 155 69.904 100.620 68.586 1.00 30.94 O
TER
ATOM 2 P A A 153 65.055 101.537 64.749 1.00 38.28 P
ATOM 3 OP1 A A 153 63.923 100.892 65.441 1.00 37.95 O
ATOM 4 OP2 A A 153 65.842 102.573 65.452 1.00 39.68 O
ATOM 5 O5' A A 153 66.064 100.423 64.225 1.00 35.60 O
ATOM 6 C5' A A 153 65.600 99.329 63.431 1.00 34.22 C
ATOM 7 C4' A A 153 66.768 98.544 62.891 1.00 34.69 C
ATOM 8 O4' A A 153 67.606 99.415 62.096 1.00 35.37 O
ATOM 9 C3' A A 153 67.710 97.939 63.916 1.00 34.49 C
ATOM 10 O3' A A 153 67.159 96.701 64.367 1.00 37.10 O
ATOM 11 C2' A A 153 68.990 97.772 63.102 1.00 34.81 C
ATOM 12 O2' A A 153 68.960 96.660 62.230 1.00 35.98 O
ATOM 13 C1' A A 153 68.962 99.030 62.235 1.00 34.65 C
ATOM 14 N9 A A 153 69.703 100.151 62.810 1.00 33.82 N
ATOM 15 C8 A A 153 69.233 101.136 63.647 1.00 35.19 C
ATOM 16 N7 A A 153 70.148 101.997 64.015 1.00 34.58 N
ATOM 17 C5 A A 153 71.297 101.556 63.373 1.00 32.89 C
ATOM 18 C6 A A 153 72.613 102.035 63.361 1.00 31.10 C
ATOM 19 N6 A A 153 73.010 103.111 64.039 1.00 34.15 N
ATOM 20 N1 A A 153 73.520 101.364 62.624 1.00 27.23 N
ATOM 21 C2 A A 153 73.122 100.291 61.948 1.00 27.08 C
ATOM 22 N3 A A 153 71.918 99.740 61.878 1.00 29.41 N
ATOM 23 C4 A A 153 71.038 100.426 62.624 1.00 32.02 C
ATOM 24 P A A 154 67.923 95.815 65.474 1.00 37.47 P
ATOM 25 OP1 A A 154 69.354 95.655 65.105 1.00 36.15 O
ATOM 26 OP2 A A 154 67.080 94.613 65.646 1.00 38.87 O
ATOM 27 O5' A A 154 67.834 96.677 66.810 1.00 35.71 O
TER
ATOM 1 O3' A B 153 67.159 96.701 64.367 1.00 37.10 O
ATOM 2 P A B 154 67.923 95.815 65.474 1.00 37.47 P
ATOM 3 OP1 A B 154 69.354 95.655 65.105 1.00 36.15 O
ATOM 4 OP2 A B 154 67.080 94.613 65.646 1.00 38.87 O
ATOM 5 O5' A B 154 67.834 96.677 66.810 1.00 35.71 O
ATOM 6 C5' A B 154 66.573 96.949 67.440 1.00 32.85 C
ATOM 7 C4' A B 154 66.299 98.424 67.396 1.00 32.37 C
ATOM 8 O4' A B 154 64.942 98.656 67.856 1.00 32.86 O
ATOM 9 C3' A B 154 67.205 99.303 68.257 1.00 33.13 C
ATOM 10 O3' A B 154 67.603 100.476 67.542 1.00 33.27 O
ATOM 11 C2' A B 154 66.293 99.684 69.424 1.00 32.71 C
ATOM 12 O2' A B 154 66.620 100.934 69.994 1.00 31.97 O
ATOM 13 C1' A B 154 64.932 99.746 68.740 1.00 32.39 C
ATOM 14 N9 A B 154 63.785 99.602 69.638 1.00 33.25 N
ATOM 15 C8 A B 154 62.681 100.416 69.708 1.00 33.63 C
ATOM 16 N7 A B 154 61.820 100.064 70.632 1.00 32.55 N
ATOM 17 C5 A B 154 62.391 98.939 71.206 1.00 34.44 C
ATOM 18 C6 A B 154 61.979 98.101 72.256 1.00 34.44 C
ATOM 19 N6 A B 154 60.838 98.267 72.932 1.00 36.10 N
ATOM 20 N1 A B 154 62.786 97.073 72.593 1.00 32.66 N
ATOM 21 C2 A B 154 63.921 96.899 71.911 1.00 33.94 C
ATOM 22 N3 A B 154 64.415 97.610 70.900 1.00 35.73 N
ATOM 23 C4 A B 154 63.596 98.634 70.596 1.00 34.77 C
ATOM 24 P A B 155 69.159 100.711 67.187 1.00 32.04 P
ATOM 25 OP1 A B 155 69.287 102.090 66.679 1.00 33.25 O
ATOM 26 OP2 A B 155 69.648 99.593 66.358 1.00 34.63 O
ATOM 27 O5' A B 155 69.904 100.620 68.586 1.00 30.94 O
TER
Atoms:
OP1: (63.923,100.892,65.441)
OP2: (65.842,102.573,65.452)
C3': (67.710,97.939,63.916)
C1': (68.962,99.030,62.235)
C5': (65.600,99.329,63.431)
O4': (67.606,99.415,62.096)
C8: (69.233,101.136,63.647)
O2': (68.960,96.660,62.230)
C6: (72.613,102.035,63.361)
C5: (71.297,101.556,63.373)
C4: (71.038,100.426,62.624)
P: (65.055,101.537,64.749)
C4': (66.768,98.544,62.891)
C2': (68.990,97.772,63.102)
C2: (73.122,100.291,61.948)
N1: (73.520,101.364,62.624)
N3: (71.918,99.740,61.878)
N6: (73.010,103.111,64.039)
N7: (70.148,101.997,64.015)
N9: (69.703,100.151,62.810)
O5': (66.064,100.423,64.225)
O3': (67.159,96.701,64.367)
OP2: (65.842,102.573,65.452)
C3': (67.710,97.939,63.916)
C1': (68.962,99.030,62.235)
C5': (65.600,99.329,63.431)
O4': (67.606,99.415,62.096)
C8: (69.233,101.136,63.647)
O2': (68.960,96.660,62.230)
C6: (72.613,102.035,63.361)
C5: (71.297,101.556,63.373)
C4: (71.038,100.426,62.624)
P: (65.055,101.537,64.749)
C4': (66.768,98.544,62.891)
C2': (68.990,97.772,63.102)
C2: (73.122,100.291,61.948)
N1: (73.520,101.364,62.624)
N3: (71.918,99.740,61.878)
N6: (73.010,103.111,64.039)
N7: (70.148,101.997,64.015)
N9: (69.703,100.151,62.810)
O5': (66.064,100.423,64.225)
O3': (67.159,96.701,64.367)
OP1: (69.354,95.655,65.105)
OP2: (67.080,94.613,65.646)
C3': (67.205,99.303,68.257)
C1': (64.932,99.746,68.740)
C5': (66.573,96.949,67.440)
O4': (64.942,98.656,67.856)
C8: (62.681,100.416,69.708)
O2': (66.620,100.934,69.994)
C6: (61.979,98.101,72.256)
C5: (62.391,98.939,71.206)
C4: (63.596,98.634,70.596)
P: (67.923,95.815,65.474)
C4': (66.299,98.424,67.396)
C2': (66.293,99.684,69.424)
C2: (63.921,96.899,71.911)
N1: (62.786,97.073,72.593)
N3: (64.415,97.610,70.900)
N6: (60.838,98.267,72.932)
N7: (61.820,100.064,70.632)
N9: (63.785,99.602,69.638)
O5': (67.834,96.677,66.810)
O3': (67.603,100.476,67.542)
OP2: (67.080,94.613,65.646)
C3': (67.205,99.303,68.257)
C1': (64.932,99.746,68.740)
C5': (66.573,96.949,67.440)
O4': (64.942,98.656,67.856)
C8: (62.681,100.416,69.708)
O2': (66.620,100.934,69.994)
C6: (61.979,98.101,72.256)
C5: (62.391,98.939,71.206)
C4: (63.596,98.634,70.596)
P: (67.923,95.815,65.474)
C4': (66.299,98.424,67.396)
C2': (66.293,99.684,69.424)
C2: (63.921,96.899,71.911)
N1: (62.786,97.073,72.593)
N3: (64.415,97.610,70.900)
N6: (60.838,98.267,72.932)
N7: (61.820,100.064,70.632)
N9: (63.785,99.602,69.638)
O5': (67.834,96.677,66.810)
O3': (67.603,100.476,67.542)
Image (generated by PyMOL):