Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:02688:02746
Extra
PDB:
ATOM 1 O3' G A2687 32.149 182.635 122.698 1.00 69.33 O
ATOM 2 P U A2688 30.603 182.867 123.061 1.00 70.27 P
ATOM 3 OP1 U A2688 30.198 181.940 124.155 1.00 69.30 O
ATOM 4 OP2 U A2688 29.847 182.871 121.783 1.00 69.26 O
ATOM 5 O5' U A2688 30.599 184.346 123.645 1.00 70.71 O
ATOM 6 C5' U A2688 31.235 184.645 124.901 1.00 73.11 C
ATOM 7 C4' U A2688 31.515 186.123 124.999 1.00 75.56 C
ATOM 8 O4' U A2688 32.674 186.465 124.188 1.00 74.97 O
ATOM 9 C3' U A2688 30.375 187.012 124.514 1.00 78.42 C
ATOM 10 O3' U A2688 30.304 188.192 125.285 1.00 83.93 O
ATOM 11 C2' U A2688 30.798 187.361 123.095 1.00 77.63 C
ATOM 12 O2' U A2688 30.249 188.576 122.617 1.00 77.29 O
ATOM 13 C1' U A2688 32.313 187.459 123.250 1.00 75.98 C
ATOM 14 N1 U A2688 33.008 187.195 121.986 1.00 74.93 N
ATOM 15 C2 U A2688 33.695 188.238 121.404 1.00 75.06 C
ATOM 16 O2 U A2688 33.779 189.345 121.912 1.00 76.07 O
ATOM 17 N3 U A2688 34.281 187.941 120.201 1.00 75.39 N
ATOM 18 C4 U A2688 34.249 186.734 119.537 1.00 75.61 C
ATOM 19 O4 U A2688 34.759 186.643 118.422 1.00 75.96 O
ATOM 20 C5 U A2688 33.538 185.700 120.216 1.00 76.07 C
ATOM 21 C6 U A2688 32.960 185.958 121.389 1.00 75.44 C
ATOM 22 P C A2689 28.936 188.563 126.031 1.00 87.36 P
ATOM 23 OP1 C A2689 27.900 187.546 125.680 1.00 86.32 O
ATOM 24 OP2 C A2689 28.683 190.002 125.739 1.00 86.78 O
ATOM 25 O5' C A2689 29.307 188.385 127.572 1.00 86.78 O
TER
ATOM 1 O3' A B2745 33.709 182.558 116.169 1.00 67.27 O
ATOM 2 P C B2746 32.226 182.629 116.777 1.00 70.26 P
ATOM 3 OP1 C B2746 32.300 182.996 118.213 1.00 69.69 O
ATOM 4 OP2 C B2746 31.516 181.394 116.374 1.00 69.63 O
ATOM 5 O5' C B2746 31.568 183.860 116.015 1.00 72.08 O
ATOM 6 C5' C B2746 31.850 185.215 116.410 1.00 76.20 C
ATOM 7 C4' C B2746 31.778 186.120 115.208 1.00 79.88 C
ATOM 8 O4' C B2746 32.875 185.805 114.314 1.00 80.65 O
ATOM 9 C3' C B2746 30.528 185.945 114.359 1.00 81.59 C
ATOM 10 O3' C B2746 29.442 186.724 114.856 1.00 83.83 O
ATOM 11 C2' C B2746 30.995 186.415 112.990 1.00 81.57 C
ATOM 12 O2' C B2746 31.018 187.823 112.889 1.00 83.41 O
ATOM 13 C1' C B2746 32.433 185.893 112.970 1.00 81.29 C
ATOM 14 N1 C B2746 32.567 184.566 112.345 1.00 81.04 N
ATOM 15 C2 C B2746 32.545 184.475 110.948 1.00 81.79 C
ATOM 16 O2 C B2746 32.410 185.515 110.276 1.00 82.33 O
ATOM 17 N3 C B2746 32.668 183.257 110.364 1.00 81.37 N
ATOM 18 C4 C B2746 32.801 182.165 111.119 1.00 80.59 C
ATOM 19 N4 C B2746 32.907 180.988 110.502 1.00 79.72 N
ATOM 20 C5 C B2746 32.829 182.230 112.541 1.00 80.85 C
ATOM 21 C6 C B2746 32.709 183.439 113.107 1.00 80.95 C
ATOM 22 P A B2747 27.938 186.173 114.728 1.00 85.41 P
ATOM 23 OP1 A B2747 27.025 187.302 115.037 1.00 85.33 O
ATOM 24 OP2 A B2747 27.819 184.902 115.488 1.00 85.44 O
ATOM 25 O5' A B2747 27.794 185.827 113.185 1.00 86.62 O
TER
ATOM 2 P U A2688 30.603 182.867 123.061 1.00 70.27 P
ATOM 3 OP1 U A2688 30.198 181.940 124.155 1.00 69.30 O
ATOM 4 OP2 U A2688 29.847 182.871 121.783 1.00 69.26 O
ATOM 5 O5' U A2688 30.599 184.346 123.645 1.00 70.71 O
ATOM 6 C5' U A2688 31.235 184.645 124.901 1.00 73.11 C
ATOM 7 C4' U A2688 31.515 186.123 124.999 1.00 75.56 C
ATOM 8 O4' U A2688 32.674 186.465 124.188 1.00 74.97 O
ATOM 9 C3' U A2688 30.375 187.012 124.514 1.00 78.42 C
ATOM 10 O3' U A2688 30.304 188.192 125.285 1.00 83.93 O
ATOM 11 C2' U A2688 30.798 187.361 123.095 1.00 77.63 C
ATOM 12 O2' U A2688 30.249 188.576 122.617 1.00 77.29 O
ATOM 13 C1' U A2688 32.313 187.459 123.250 1.00 75.98 C
ATOM 14 N1 U A2688 33.008 187.195 121.986 1.00 74.93 N
ATOM 15 C2 U A2688 33.695 188.238 121.404 1.00 75.06 C
ATOM 16 O2 U A2688 33.779 189.345 121.912 1.00 76.07 O
ATOM 17 N3 U A2688 34.281 187.941 120.201 1.00 75.39 N
ATOM 18 C4 U A2688 34.249 186.734 119.537 1.00 75.61 C
ATOM 19 O4 U A2688 34.759 186.643 118.422 1.00 75.96 O
ATOM 20 C5 U A2688 33.538 185.700 120.216 1.00 76.07 C
ATOM 21 C6 U A2688 32.960 185.958 121.389 1.00 75.44 C
ATOM 22 P C A2689 28.936 188.563 126.031 1.00 87.36 P
ATOM 23 OP1 C A2689 27.900 187.546 125.680 1.00 86.32 O
ATOM 24 OP2 C A2689 28.683 190.002 125.739 1.00 86.78 O
ATOM 25 O5' C A2689 29.307 188.385 127.572 1.00 86.78 O
TER
ATOM 1 O3' A B2745 33.709 182.558 116.169 1.00 67.27 O
ATOM 2 P C B2746 32.226 182.629 116.777 1.00 70.26 P
ATOM 3 OP1 C B2746 32.300 182.996 118.213 1.00 69.69 O
ATOM 4 OP2 C B2746 31.516 181.394 116.374 1.00 69.63 O
ATOM 5 O5' C B2746 31.568 183.860 116.015 1.00 72.08 O
ATOM 6 C5' C B2746 31.850 185.215 116.410 1.00 76.20 C
ATOM 7 C4' C B2746 31.778 186.120 115.208 1.00 79.88 C
ATOM 8 O4' C B2746 32.875 185.805 114.314 1.00 80.65 O
ATOM 9 C3' C B2746 30.528 185.945 114.359 1.00 81.59 C
ATOM 10 O3' C B2746 29.442 186.724 114.856 1.00 83.83 O
ATOM 11 C2' C B2746 30.995 186.415 112.990 1.00 81.57 C
ATOM 12 O2' C B2746 31.018 187.823 112.889 1.00 83.41 O
ATOM 13 C1' C B2746 32.433 185.893 112.970 1.00 81.29 C
ATOM 14 N1 C B2746 32.567 184.566 112.345 1.00 81.04 N
ATOM 15 C2 C B2746 32.545 184.475 110.948 1.00 81.79 C
ATOM 16 O2 C B2746 32.410 185.515 110.276 1.00 82.33 O
ATOM 17 N3 C B2746 32.668 183.257 110.364 1.00 81.37 N
ATOM 18 C4 C B2746 32.801 182.165 111.119 1.00 80.59 C
ATOM 19 N4 C B2746 32.907 180.988 110.502 1.00 79.72 N
ATOM 20 C5 C B2746 32.829 182.230 112.541 1.00 80.85 C
ATOM 21 C6 C B2746 32.709 183.439 113.107 1.00 80.95 C
ATOM 22 P A B2747 27.938 186.173 114.728 1.00 85.41 P
ATOM 23 OP1 A B2747 27.025 187.302 115.037 1.00 85.33 O
ATOM 24 OP2 A B2747 27.819 184.902 115.488 1.00 85.44 O
ATOM 25 O5' A B2747 27.794 185.827 113.185 1.00 86.62 O
TER
Atoms:
C4: (34.249,186.734,119.537)
N3: (34.281,187.941,120.201)
OP1: (30.198,181.940,124.155)
OP2: (29.847,182.871,121.783)
C2: (33.695,188.238,121.404)
C1': (32.313,187.459,123.250)
C3': (30.375,187.012,124.514)
O5': (30.599,184.346,123.645)
O4': (32.674,186.465,124.188)
C5': (31.235,184.645,124.901)
P: (30.603,182.867,123.061)
C4': (31.515,186.123,124.999)
C2': (30.798,187.361,123.095)
O2': (30.249,188.576,122.617)
N1: (33.008,187.195,121.986)
O4: (34.759,186.643,118.422)
O2: (33.779,189.345,121.912)
C6: (32.960,185.958,121.389)
C5: (33.538,185.700,120.216)
O3': (30.304,188.192,125.285)
N3: (34.281,187.941,120.201)
OP1: (30.198,181.940,124.155)
OP2: (29.847,182.871,121.783)
C2: (33.695,188.238,121.404)
C1': (32.313,187.459,123.250)
C3': (30.375,187.012,124.514)
O5': (30.599,184.346,123.645)
O4': (32.674,186.465,124.188)
C5': (31.235,184.645,124.901)
P: (30.603,182.867,123.061)
C4': (31.515,186.123,124.999)
C2': (30.798,187.361,123.095)
O2': (30.249,188.576,122.617)
N1: (33.008,187.195,121.986)
O4: (34.759,186.643,118.422)
O2: (33.779,189.345,121.912)
C6: (32.960,185.958,121.389)
C5: (33.538,185.700,120.216)
O3': (30.304,188.192,125.285)
C2: (32.545,184.475,110.948)
OP1: (32.300,182.996,118.213)
OP2: (31.516,181.394,116.374)
C4: (32.801,182.165,111.119)
O5': (31.568,183.860,116.015)
C3': (30.528,185.945,114.359)
C1': (32.433,185.893,112.970)
O4': (32.875,185.805,114.314)
C5': (31.850,185.215,116.410)
P: (32.226,182.629,116.777)
O2: (32.410,185.515,110.276)
C4': (31.778,186.120,115.208)
C2': (30.995,186.415,112.990)
O2': (31.018,187.823,112.889)
N1: (32.567,184.566,112.345)
N3: (32.668,183.257,110.364)
N4: (32.907,180.988,110.502)
C6: (32.709,183.439,113.107)
C5: (32.829,182.230,112.541)
O3': (29.442,186.724,114.856)
OP1: (32.300,182.996,118.213)
OP2: (31.516,181.394,116.374)
C4: (32.801,182.165,111.119)
O5': (31.568,183.860,116.015)
C3': (30.528,185.945,114.359)
C1': (32.433,185.893,112.970)
O4': (32.875,185.805,114.314)
C5': (31.850,185.215,116.410)
P: (32.226,182.629,116.777)
O2: (32.410,185.515,110.276)
C4': (31.778,186.120,115.208)
C2': (30.995,186.415,112.990)
O2': (31.018,187.823,112.889)
N1: (32.567,184.566,112.345)
N3: (32.668,183.257,110.364)
N4: (32.907,180.988,110.502)
C6: (32.709,183.439,113.107)
C5: (32.829,182.230,112.541)
O3': (29.442,186.724,114.856)
Image (generated by PyMOL):