Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:01087:01086
Extra
PDB:
ATOM 1 O3' C A1086 49.583 101.317 114.942 1.00 42.66 O
ATOM 2 P U A1087 48.380 100.950 115.947 1.00 42.61 P
ATOM 3 OP1 U A1087 48.963 100.881 117.312 1.00 40.03 O
ATOM 4 OP2 U A1087 47.650 99.777 115.397 1.00 41.51 O
ATOM 5 O5' U A1087 47.415 102.209 115.889 1.00 41.19 O
ATOM 6 C5' U A1087 47.876 103.486 116.321 1.00 39.81 C
ATOM 7 C4' U A1087 46.811 104.527 116.104 1.00 39.86 C
ATOM 8 O4' U A1087 46.560 104.654 114.674 1.00 38.64 O
ATOM 9 C3' U A1087 45.456 104.249 116.754 1.00 38.72 C
ATOM 10 O3' U A1087 44.918 105.471 117.249 1.00 41.10 O
ATOM 11 C2' U A1087 44.624 103.760 115.573 1.00 38.26 C
ATOM 12 O2' U A1087 43.237 103.957 115.731 1.00 37.89 O
ATOM 13 C1' U A1087 45.172 104.641 114.457 1.00 37.95 C
ATOM 14 N1 U A1087 44.904 104.196 113.083 1.00 37.33 N
ATOM 15 C2 U A1087 44.329 105.116 112.223 1.00 37.86 C
ATOM 16 O2 U A1087 44.076 106.267 112.553 1.00 38.27 O
ATOM 17 N3 U A1087 44.063 104.643 110.960 1.00 36.94 N
ATOM 18 C4 U A1087 44.312 103.374 110.478 1.00 36.83 C
ATOM 19 O4 U A1087 43.984 103.089 109.323 1.00 36.20 O
ATOM 20 C5 U A1087 44.926 102.488 111.421 1.00 36.90 C
ATOM 21 C6 U A1087 45.196 102.919 112.660 1.00 37.58 C
ATOM 22 P C A1088 45.002 105.799 118.823 1.00 45.53 P
ATOM 23 OP1 C A1088 44.442 107.164 119.044 1.00 44.59 O
ATOM 24 OP2 C A1088 46.384 105.488 119.287 1.00 45.64 O
ATOM 25 O5' C A1088 44.027 104.729 119.491 1.00 46.54 O
TER
ATOM 1 O3' C B1085 45.544 99.146 111.638 1.00 46.46 O
ATOM 2 P C B1086 47.012 99.082 110.985 1.00 45.80 P
ATOM 3 OP1 C B1086 46.982 99.888 109.743 1.00 47.31 O
ATOM 4 OP2 C B1086 47.438 97.662 110.918 1.00 46.09 O
ATOM 5 O5' C B1086 47.908 99.856 112.048 1.00 44.58 O
ATOM 6 C5' C B1086 49.316 99.608 112.173 1.00 42.65 C
ATOM 7 C4' C B1086 50.027 100.876 112.577 1.00 41.71 C
ATOM 8 O4' C B1086 50.197 101.726 111.420 1.00 39.68 O
ATOM 9 C3' C B1086 49.306 101.744 113.603 1.00 41.49 C
ATOM 10 O3' C B1086 49.583 101.317 114.942 1.00 42.66 O
ATOM 11 C2' C B1086 49.905 103.121 113.340 1.00 40.73 C
ATOM 12 O2' C B1086 51.146 103.305 113.990 1.00 42.08 O
ATOM 13 C1' C B1086 50.122 103.086 111.820 1.00 39.85 C
ATOM 14 N1 C B1086 49.070 103.759 111.027 1.00 38.75 N
ATOM 15 C2 C B1086 48.877 105.140 111.183 1.00 38.55 C
ATOM 16 O2 C B1086 49.611 105.773 111.960 1.00 38.58 O
ATOM 17 N3 C B1086 47.903 105.751 110.474 1.00 38.93 N
ATOM 18 C4 C B1086 47.151 105.048 109.625 1.00 38.56 C
ATOM 19 N4 C B1086 46.203 105.698 108.941 1.00 39.42 N
ATOM 20 C5 C B1086 47.337 103.649 109.436 1.00 37.70 C
ATOM 21 C6 C B1086 48.292 103.051 110.152 1.00 37.86 C
ATOM 22 P U B1087 48.380 100.950 115.947 1.00 42.61 P
ATOM 23 OP1 U B1087 48.963 100.881 117.312 1.00 40.03 O
ATOM 24 OP2 U B1087 47.650 99.777 115.397 1.00 41.51 O
ATOM 25 O5' U B1087 47.415 102.209 115.889 1.00 41.19 O
TER
ATOM 2 P U A1087 48.380 100.950 115.947 1.00 42.61 P
ATOM 3 OP1 U A1087 48.963 100.881 117.312 1.00 40.03 O
ATOM 4 OP2 U A1087 47.650 99.777 115.397 1.00 41.51 O
ATOM 5 O5' U A1087 47.415 102.209 115.889 1.00 41.19 O
ATOM 6 C5' U A1087 47.876 103.486 116.321 1.00 39.81 C
ATOM 7 C4' U A1087 46.811 104.527 116.104 1.00 39.86 C
ATOM 8 O4' U A1087 46.560 104.654 114.674 1.00 38.64 O
ATOM 9 C3' U A1087 45.456 104.249 116.754 1.00 38.72 C
ATOM 10 O3' U A1087 44.918 105.471 117.249 1.00 41.10 O
ATOM 11 C2' U A1087 44.624 103.760 115.573 1.00 38.26 C
ATOM 12 O2' U A1087 43.237 103.957 115.731 1.00 37.89 O
ATOM 13 C1' U A1087 45.172 104.641 114.457 1.00 37.95 C
ATOM 14 N1 U A1087 44.904 104.196 113.083 1.00 37.33 N
ATOM 15 C2 U A1087 44.329 105.116 112.223 1.00 37.86 C
ATOM 16 O2 U A1087 44.076 106.267 112.553 1.00 38.27 O
ATOM 17 N3 U A1087 44.063 104.643 110.960 1.00 36.94 N
ATOM 18 C4 U A1087 44.312 103.374 110.478 1.00 36.83 C
ATOM 19 O4 U A1087 43.984 103.089 109.323 1.00 36.20 O
ATOM 20 C5 U A1087 44.926 102.488 111.421 1.00 36.90 C
ATOM 21 C6 U A1087 45.196 102.919 112.660 1.00 37.58 C
ATOM 22 P C A1088 45.002 105.799 118.823 1.00 45.53 P
ATOM 23 OP1 C A1088 44.442 107.164 119.044 1.00 44.59 O
ATOM 24 OP2 C A1088 46.384 105.488 119.287 1.00 45.64 O
ATOM 25 O5' C A1088 44.027 104.729 119.491 1.00 46.54 O
TER
ATOM 1 O3' C B1085 45.544 99.146 111.638 1.00 46.46 O
ATOM 2 P C B1086 47.012 99.082 110.985 1.00 45.80 P
ATOM 3 OP1 C B1086 46.982 99.888 109.743 1.00 47.31 O
ATOM 4 OP2 C B1086 47.438 97.662 110.918 1.00 46.09 O
ATOM 5 O5' C B1086 47.908 99.856 112.048 1.00 44.58 O
ATOM 6 C5' C B1086 49.316 99.608 112.173 1.00 42.65 C
ATOM 7 C4' C B1086 50.027 100.876 112.577 1.00 41.71 C
ATOM 8 O4' C B1086 50.197 101.726 111.420 1.00 39.68 O
ATOM 9 C3' C B1086 49.306 101.744 113.603 1.00 41.49 C
ATOM 10 O3' C B1086 49.583 101.317 114.942 1.00 42.66 O
ATOM 11 C2' C B1086 49.905 103.121 113.340 1.00 40.73 C
ATOM 12 O2' C B1086 51.146 103.305 113.990 1.00 42.08 O
ATOM 13 C1' C B1086 50.122 103.086 111.820 1.00 39.85 C
ATOM 14 N1 C B1086 49.070 103.759 111.027 1.00 38.75 N
ATOM 15 C2 C B1086 48.877 105.140 111.183 1.00 38.55 C
ATOM 16 O2 C B1086 49.611 105.773 111.960 1.00 38.58 O
ATOM 17 N3 C B1086 47.903 105.751 110.474 1.00 38.93 N
ATOM 18 C4 C B1086 47.151 105.048 109.625 1.00 38.56 C
ATOM 19 N4 C B1086 46.203 105.698 108.941 1.00 39.42 N
ATOM 20 C5 C B1086 47.337 103.649 109.436 1.00 37.70 C
ATOM 21 C6 C B1086 48.292 103.051 110.152 1.00 37.86 C
ATOM 22 P U B1087 48.380 100.950 115.947 1.00 42.61 P
ATOM 23 OP1 U B1087 48.963 100.881 117.312 1.00 40.03 O
ATOM 24 OP2 U B1087 47.650 99.777 115.397 1.00 41.51 O
ATOM 25 O5' U B1087 47.415 102.209 115.889 1.00 41.19 O
TER
Atoms:
C4: (44.312,103.374,110.478)
N3: (44.063,104.643,110.960)
OP1: (48.963,100.881,117.312)
OP2: (47.650,99.777,115.397)
C2: (44.329,105.116,112.223)
C1': (45.172,104.641,114.457)
C3': (45.456,104.249,116.754)
O5': (47.415,102.209,115.889)
O4': (46.560,104.654,114.674)
C5': (47.876,103.486,116.321)
P: (48.380,100.950,115.947)
C4': (46.811,104.527,116.104)
C2': (44.624,103.760,115.573)
O2': (43.237,103.957,115.731)
N1: (44.904,104.196,113.083)
O4: (43.984,103.089,109.323)
O2: (44.076,106.267,112.553)
C6: (45.196,102.919,112.660)
C5: (44.926,102.488,111.421)
O3': (44.918,105.471,117.249)
N3: (44.063,104.643,110.960)
OP1: (48.963,100.881,117.312)
OP2: (47.650,99.777,115.397)
C2: (44.329,105.116,112.223)
C1': (45.172,104.641,114.457)
C3': (45.456,104.249,116.754)
O5': (47.415,102.209,115.889)
O4': (46.560,104.654,114.674)
C5': (47.876,103.486,116.321)
P: (48.380,100.950,115.947)
C4': (46.811,104.527,116.104)
C2': (44.624,103.760,115.573)
O2': (43.237,103.957,115.731)
N1: (44.904,104.196,113.083)
O4: (43.984,103.089,109.323)
O2: (44.076,106.267,112.553)
C6: (45.196,102.919,112.660)
C5: (44.926,102.488,111.421)
O3': (44.918,105.471,117.249)
C2: (48.877,105.140,111.183)
OP1: (46.982,99.888,109.743)
OP2: (47.438,97.662,110.918)
C4: (47.151,105.048,109.625)
O5': (47.908,99.856,112.048)
C3': (49.306,101.744,113.603)
C1': (50.122,103.086,111.820)
O4': (50.197,101.726,111.420)
C5': (49.316,99.608,112.173)
P: (47.012,99.082,110.985)
O2: (49.611,105.773,111.960)
C4': (50.027,100.876,112.577)
C2': (49.905,103.121,113.340)
O2': (51.146,103.305,113.990)
N1: (49.070,103.759,111.027)
N3: (47.903,105.751,110.474)
N4: (46.203,105.698,108.941)
C6: (48.292,103.051,110.152)
C5: (47.337,103.649,109.436)
O3': (49.583,101.317,114.942)
OP1: (46.982,99.888,109.743)
OP2: (47.438,97.662,110.918)
C4: (47.151,105.048,109.625)
O5': (47.908,99.856,112.048)
C3': (49.306,101.744,113.603)
C1': (50.122,103.086,111.820)
O4': (50.197,101.726,111.420)
C5': (49.316,99.608,112.173)
P: (47.012,99.082,110.985)
O2: (49.611,105.773,111.960)
C4': (50.027,100.876,112.577)
C2': (49.905,103.121,113.340)
O2': (51.146,103.305,113.990)
N1: (49.070,103.759,111.027)
N3: (47.903,105.751,110.474)
N4: (46.203,105.698,108.941)
C6: (48.292,103.051,110.152)
C5: (47.337,103.649,109.436)
O3': (49.583,101.317,114.942)
Image (generated by PyMOL):