ClaRNA

Doublet info:

Details

Nucleotide types: UC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YLS:B33:B32

Extra

PDB:
ATOM 1 O3' C A 32 37.000 34.207 31.946 1.00 18.33 O
ATOM 2 P U A 33 38.318 34.352 31.099 1.00 15.83 P
ATOM 3 OP1 U A 33 39.051 35.460 31.699 1.00 16.16 O
ATOM 4 OP2 U A 33 37.862 34.419 29.679 1.00 15.74 O
ATOM 5 O5' U A 33 39.044 32.982 31.412 1.00 14.75 O
ATOM 6 C5' U A 33 39.310 32.638 32.772 1.00 16.05 C
ATOM 7 C4' U A 33 39.486 31.133 32.971 1.00 17.15 C
ATOM 8 O4' U A 33 38.285 30.417 32.575 1.00 18.96 O
ATOM 9 C3' U A 33 40.578 30.509 32.146 1.00 18.28 C
ATOM 10 O3' U A 33 41.355 29.764 32.958 1.00 15.55 O
ATOM 11 C2' U A 33 39.848 29.683 31.073 1.00 20.80 C
ATOM 12 O2' U A 33 40.656 28.599 30.618 1.00 23.29 O
ATOM 13 C1' U A 33 38.639 29.254 31.871 1.00 19.70 C
ATOM 14 N1 U A 33 37.431 28.801 31.170 1.00 18.43 N
ATOM 15 C2 U A 33 37.010 27.476 31.281 1.00 20.64 C
ATOM 16 O2 U A 33 37.623 26.598 31.853 1.00 20.96 O
ATOM 17 N3 U A 33 35.824 27.171 30.653 1.00 21.57 N
ATOM 18 C4 U A 33 35.019 28.034 29.957 1.00 21.02 C
ATOM 19 O4 U A 33 33.996 27.604 29.456 1.00 19.12 O
ATOM 20 C5 U A 33 35.494 29.401 29.904 1.00 21.13 C
ATOM 21 C6 U A 33 36.659 29.720 30.516 1.00 20.21 C
ATOM 22 P C A 34 42.759 30.395 33.300 1.00 21.52 P
ATOM 23 OP1 C A 34 43.491 29.514 34.243 1.00 21.10 O
ATOM 24 OP2 C A 34 42.575 31.823 33.573 1.00 21.16 O
ATOM 25 O5' C A 34 43.520 30.365 31.928 1.00 23.06 O
TER

ATOM 1 O3' A B 31 35.245 31.879 27.651 1.00 21.88 O
ATOM 2 P C B 32 34.278 33.138 27.562 1.00 21.77 P
ATOM 3 OP1 C B 32 33.035 32.769 26.838 1.00 16.35 O
ATOM 4 OP2 C B 32 35.065 34.276 27.064 1.00 29.19 O
ATOM 5 O5' C B 32 34.101 33.381 29.134 1.00 20.69 O
ATOM 6 C5' C B 32 34.489 34.601 29.715 1.00 19.36 C
ATOM 7 C4' C B 32 34.820 34.444 31.168 1.00 18.10 C
ATOM 8 O4' C B 32 33.686 33.927 31.863 1.00 18.82 O
ATOM 9 C3' C B 32 35.947 33.503 31.423 1.00 18.05 C
ATOM 10 O3' C B 32 37.000 34.207 31.946 1.00 18.33 O
ATOM 11 C2' C B 32 35.462 32.497 32.433 1.00 17.92 C
ATOM 12 O2' C B 32 36.118 32.598 33.672 1.00 17.36 O
ATOM 13 C1' C B 32 33.986 32.770 32.567 1.00 17.72 C
ATOM 14 N1 C B 32 33.242 31.695 32.037 1.00 17.28 N
ATOM 15 C2 C B 32 33.514 30.439 32.522 1.00 20.44 C
ATOM 16 O2 C B 32 34.378 30.312 33.401 1.00 22.12 O
ATOM 17 N3 C B 32 32.834 29.393 32.039 1.00 21.57 N
ATOM 18 C4 C B 32 31.924 29.583 31.099 1.00 22.22 C
ATOM 19 N4 C B 32 31.243 28.521 30.655 1.00 23.62 N
ATOM 20 C5 C B 32 31.643 30.874 30.590 1.00 20.59 C
ATOM 21 C6 C B 32 32.322 31.894 31.087 1.00 18.49 C
ATOM 22 P U B 33 38.318 34.352 31.099 1.00 15.83 P
ATOM 23 OP1 U B 33 39.051 35.460 31.699 1.00 16.16 O
ATOM 24 OP2 U B 33 37.862 34.419 29.679 1.00 15.74 O
ATOM 25 O5' U B 33 39.044 32.982 31.412 1.00 14.75 O
TER

Atoms:
C4: (35.019,28.034,29.957)
N3: (35.824,27.171,30.653)
OP1: (39.051,35.460,31.699)
OP2: (37.862,34.419,29.679)
C2: (37.010,27.476,31.281)
C1': (38.639,29.254,31.871)
C3': (40.578,30.509,32.146)
O5': (39.044,32.982,31.412)
O4': (38.285,30.417,32.575)
C5': (39.310,32.638,32.772)
P: (38.318,34.352,31.099)
C4': (39.486,31.133,32.971)
C2': (39.848,29.683,31.073)
O2': (40.656,28.599,30.618)
N1: (37.431,28.801,31.170)
O4: (33.996,27.604,29.456)
O2: (37.623,26.598,31.853)
C6: (36.659,29.720,30.516)
C5: (35.494,29.401,29.904)
O3': (41.355,29.764,32.958)
C2: (33.514,30.439,32.522)
OP1: (33.035,32.769,26.838)
OP2: (35.065,34.276,27.064)
C4: (31.924,29.583,31.099)
O5': (34.101,33.381,29.134)
C3': (35.947,33.503,31.423)
C1': (33.986,32.770,32.567)
O4': (33.686,33.927,31.863)
C5': (34.489,34.601,29.715)
P: (34.278,33.138,27.562)
O2: (34.378,30.312,33.401)
C4': (34.820,34.444,31.168)
C2': (35.462,32.497,32.433)
O2': (36.118,32.598,33.672)
N1: (33.242,31.695,32.037)
N3: (32.834,29.393,32.039)
N4: (31.243,28.521,30.655)
C6: (32.322,31.894,31.087)
C5: (31.643,30.874,30.590)
O3': (37.000,34.207,31.946)
Image (generated by PyMOL):
PyMOL image
show in jmol