ClaRNA

Doublet info:

Details

Nucleotide types: UC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1Z43:A9:A49

Extra

PDB:
ATOM 1 O3' G A 8 34.214 -4.165 103.946 1.00 30.59 O
ATOM 2 P U A 9 32.961 -3.360 103.292 1.00 30.97 P
ATOM 3 OP1 U A 9 32.364 -4.138 102.163 1.00 28.12 O
ATOM 4 OP2 U A 9 33.341 -1.927 103.286 1.00 27.62 O
ATOM 5 O5' U A 9 31.903 -3.607 104.441 1.00 30.46 O
ATOM 6 C5' U A 9 32.183 -4.919 104.950 1.00 30.68 C
ATOM 7 C4' U A 9 31.253 -5.381 106.032 1.00 28.30 C
ATOM 8 O4' U A 9 31.273 -4.448 107.084 1.00 29.48 O
ATOM 9 C3' U A 9 29.830 -5.378 105.667 1.00 27.60 C
ATOM 10 O3' U A 9 29.654 -6.524 105.001 1.00 30.76 O
ATOM 11 C2' U A 9 29.241 -5.593 106.996 1.00 28.27 C
ATOM 12 O2' U A 9 29.514 -6.936 107.254 1.00 26.15 O
ATOM 13 C1' U A 9 30.049 -4.582 107.751 1.00 28.48 C
ATOM 14 N1 U A 9 29.498 -3.254 107.621 1.00 28.00 N
ATOM 15 C2 U A 9 28.348 -3.003 108.259 1.00 28.91 C
ATOM 16 O2 U A 9 27.837 -3.887 108.897 1.00 30.71 O
ATOM 17 N3 U A 9 27.887 -1.727 108.121 1.00 30.05 N
ATOM 18 C4 U A 9 28.488 -0.725 107.390 1.00 30.44 C
ATOM 19 O4 U A 9 27.963 0.379 107.314 1.00 33.89 O
ATOM 20 C5 U A 9 29.730 -1.075 106.762 1.00 27.97 C
ATOM 21 C6 U A 9 30.173 -2.315 106.885 1.00 26.61 C
ATOM 22 P G A 10 28.308 -6.836 104.226 1.00 37.22 P
ATOM 23 OP1 G A 10 28.484 -8.149 103.513 1.00 36.91 O
ATOM 24 OP2 G A 10 27.947 -5.608 103.458 1.00 33.12 O
ATOM 25 O5' G A 10 27.400 -7.138 105.492 1.00 33.15 O
TER

ATOM 1 O3' A B 48 33.112 0.914 106.671 1.00 26.98 O
ATOM 2 P C B 49 31.934 1.934 106.761 1.00 31.05 P
ATOM 3 OP1 C B 49 30.912 1.477 107.743 1.00 29.13 O
ATOM 4 OP2 C B 49 31.635 2.045 105.299 1.00 33.07 O
ATOM 5 O5' C B 49 32.651 3.280 107.281 1.00 27.33 O
ATOM 6 C5' C B 49 33.638 3.798 106.408 1.00 27.94 C
ATOM 7 C4' C B 49 34.861 4.363 107.092 1.00 29.10 C
ATOM 8 O4' C B 49 35.794 3.318 107.491 1.00 27.48 O
ATOM 9 C3' C B 49 35.763 5.173 106.171 1.00 31.08 C
ATOM 10 O3' C B 49 35.211 6.389 105.803 1.00 34.39 O
ATOM 11 C2' C B 49 36.933 5.394 107.066 1.00 28.72 C
ATOM 12 O2' C B 49 36.633 6.301 108.089 1.00 29.78 O
ATOM 13 C1' C B 49 37.024 4.024 107.684 1.00 28.76 C
ATOM 14 N1 C B 49 38.237 3.348 107.138 1.00 27.15 N
ATOM 15 C2 C B 49 39.453 3.923 107.505 1.00 28.07 C
ATOM 16 O2 C B 49 39.452 4.957 108.221 1.00 29.43 O
ATOM 17 N3 C B 49 40.606 3.324 107.106 1.00 26.58 N
ATOM 18 C4 C B 49 40.583 2.241 106.355 1.00 23.81 C
ATOM 19 N4 C B 49 41.773 1.741 105.976 1.00 17.73 N
ATOM 20 C5 C B 49 39.324 1.655 105.990 1.00 23.38 C
ATOM 21 C6 C B 49 38.194 2.224 106.393 1.00 23.96 C
ATOM 22 P C B 50 35.709 7.089 104.463 1.00 38.35 P
ATOM 23 OP1 C B 50 34.756 8.206 104.202 1.00 37.99 O
ATOM 24 OP2 C B 50 35.968 6.154 103.352 1.00 31.13 O
ATOM 25 O5' C B 50 37.038 7.751 105.073 1.00 38.72 O
TER

Atoms:
C4: (28.488,-0.725,107.390)
N3: (27.887,-1.727,108.121)
OP1: (32.364,-4.138,102.163)
OP2: (33.341,-1.927,103.286)
C2: (28.348,-3.003,108.259)
C1': (30.049,-4.582,107.751)
C3': (29.830,-5.378,105.667)
O5': (31.903,-3.607,104.441)
O4': (31.273,-4.448,107.084)
C5': (32.183,-4.919,104.950)
P: (32.961,-3.360,103.292)
C4': (31.253,-5.381,106.032)
C2': (29.241,-5.593,106.996)
O2': (29.514,-6.936,107.254)
N1: (29.498,-3.254,107.621)
O4: (27.963,0.379,107.314)
O2: (27.837,-3.887,108.897)
C6: (30.173,-2.315,106.885)
C5: (29.730,-1.075,106.762)
O3': (29.654,-6.524,105.001)
C2: (39.453,3.923,107.505)
OP1: (30.912,1.477,107.743)
OP2: (31.635,2.045,105.299)
C4: (40.583,2.241,106.355)
O5': (32.651,3.280,107.281)
C3': (35.763,5.173,106.171)
C1': (37.024,4.024,107.684)
O4': (35.794,3.318,107.491)
C5': (33.638,3.798,106.408)
P: (31.934,1.934,106.761)
O2: (39.452,4.957,108.221)
C4': (34.861,4.363,107.092)
C2': (36.933,5.394,107.066)
O2': (36.633,6.301,108.089)
N1: (38.237,3.348,107.138)
N3: (40.606,3.324,107.106)
N4: (41.773,1.741,105.976)
C6: (38.194,2.224,106.393)
C5: (39.324,1.655,105.990)
O3': (35.211,6.389,105.803)
Image (generated by PyMOL):
PyMOL image
show in jmol