ClaRNA

Doublet info:

Details

Nucleotide types: UC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2G9C:A36:A35

Extra

PDB:
ATOM 1 O3' C A 35 5.874 21.440 9.165 1.00 34.04 O
ATOM 2 P U A 36 7.366 22.033 9.045 1.00 35.34 P
ATOM 3 OP1 U A 36 7.400 23.426 9.582 1.00 34.89 O
ATOM 4 OP2 U A 36 7.877 21.758 7.668 1.00 33.80 O
ATOM 5 O5' U A 36 8.184 21.103 10.049 1.00 33.79 O
ATOM 6 C5' U A 36 7.896 21.107 11.444 1.00 33.27 C
ATOM 7 C4' U A 36 8.515 19.909 12.125 1.00 31.38 C
ATOM 8 O4' U A 36 7.862 18.675 11.723 1.00 31.34 O
ATOM 9 C3' U A 36 9.991 19.621 11.901 1.00 31.17 C
ATOM 10 O3' U A 36 10.795 20.469 12.706 1.00 30.98 O
ATOM 11 C2' U A 36 10.056 18.183 12.387 1.00 29.97 C
ATOM 12 O2' U A 36 9.865 18.034 13.793 1.00 29.81 O
ATOM 13 C1' U A 36 8.809 17.613 11.705 1.00 29.37 C
ATOM 14 N1 U A 36 9.025 17.185 10.311 1.00 27.98 N
ATOM 15 C2 U A 36 9.565 15.935 10.138 1.00 26.79 C
ATOM 16 O2 U A 36 9.889 15.246 11.059 1.00 27.31 O
ATOM 17 N3 U A 36 9.722 15.528 8.841 1.00 26.21 N
ATOM 18 C4 U A 36 9.420 16.239 7.707 1.00 24.91 C
ATOM 19 O4 U A 36 9.600 15.712 6.608 1.00 25.25 O
ATOM 20 C5 U A 36 8.871 17.550 7.954 1.00 26.21 C
ATOM 21 C6 U A 36 8.698 17.970 9.225 1.00 27.00 C
ATOM 22 P A A 37 12.322 20.739 12.321 1.00 31.97 P
ATOM 23 OP1 A A 37 12.912 21.593 13.398 1.00 32.32 O
ATOM 24 OP2 A A 37 12.530 21.126 10.909 1.00 30.40 O
ATOM 25 O5' A A 37 13.012 19.289 12.412 1.00 30.54 O
TER

ATOM 1 O3' U B 34 4.935 18.131 4.190 1.00 33.30 O
ATOM 2 P C B 35 6.065 19.238 4.490 1.00 36.18 P
ATOM 3 OP1 C B 35 5.783 20.480 3.689 1.00 36.89 O
ATOM 4 OP2 C B 35 7.393 18.569 4.374 1.00 35.95 O
ATOM 5 O5' C B 35 5.819 19.552 6.021 1.00 35.34 O
ATOM 6 C5' C B 35 4.651 20.291 6.417 1.00 34.82 C
ATOM 7 C4' C B 35 4.376 20.065 7.869 1.00 33.24 C
ATOM 8 O4' C B 35 3.879 18.713 8.031 1.00 32.61 O
ATOM 9 C3' C B 35 5.615 20.114 8.742 1.00 33.30 C
ATOM 10 O3' C B 35 5.874 21.440 9.165 1.00 34.04 O
ATOM 11 C2' C B 35 5.191 19.269 9.924 1.00 32.54 C
ATOM 12 O2' C B 35 4.343 19.995 10.771 1.00 33.15 O
ATOM 13 C1' C B 35 4.384 18.169 9.234 1.00 31.96 C
ATOM 14 N1 C B 35 5.172 16.979 8.891 1.00 30.41 N
ATOM 15 C2 C B 35 5.634 16.188 9.922 1.00 29.88 C
ATOM 16 O2 C B 35 5.376 16.532 11.058 1.00 30.60 O
ATOM 17 N3 C B 35 6.330 15.048 9.652 1.00 29.24 N
ATOM 18 C4 C B 35 6.534 14.688 8.380 1.00 28.94 C
ATOM 19 N4 C B 35 7.155 13.522 8.138 1.00 27.35 N
ATOM 20 C5 C B 35 6.084 15.499 7.290 1.00 29.64 C
ATOM 21 C6 C B 35 5.415 16.638 7.596 1.00 30.24 C
ATOM 22 P U B 36 7.366 22.033 9.045 1.00 35.34 P
ATOM 23 OP1 U B 36 7.400 23.426 9.582 1.00 34.89 O
ATOM 24 OP2 U B 36 7.877 21.758 7.668 1.00 33.80 O
ATOM 25 O5' U B 36 8.184 21.103 10.049 1.00 33.79 O
TER

Atoms:
C4: (9.420,16.239,7.707)
N3: (9.722,15.528,8.841)
OP1: (7.400,23.426,9.582)
OP2: (7.877,21.758,7.668)
C2: (9.565,15.935,10.138)
C1': (8.809,17.613,11.705)
C3': (9.991,19.621,11.901)
O5': (8.184,21.103,10.049)
O4': (7.862,18.675,11.723)
C5': (7.896,21.107,11.444)
P: (7.366,22.033,9.045)
C4': (8.515,19.909,12.125)
C2': (10.056,18.183,12.387)
O2': (9.865,18.034,13.793)
N1: (9.025,17.185,10.311)
O4: (9.600,15.712,6.608)
O2: (9.889,15.246,11.059)
C6: (8.698,17.970,9.225)
C5: (8.871,17.550,7.954)
O3': (10.795,20.469,12.706)
C2: (5.634,16.188,9.922)
OP1: (5.783,20.480,3.689)
OP2: (7.393,18.569,4.374)
C4: (6.534,14.688,8.380)
O5': (5.819,19.552,6.021)
C3': (5.615,20.114,8.742)
C1': (4.384,18.169,9.234)
O4': (3.879,18.713,8.031)
C5': (4.651,20.291,6.417)
P: (6.065,19.238,4.490)
O2: (5.376,16.532,11.058)
C4': (4.376,20.065,7.869)
C2': (5.191,19.269,9.924)
O2': (4.343,19.995,10.771)
N1: (5.172,16.979,8.891)
N3: (6.330,15.048,9.652)
N4: (7.155,13.522,8.138)
C6: (5.415,16.638,7.596)
C5: (6.084,15.499,7.290)
O3': (5.874,21.440,9.165)
Image (generated by PyMOL):
PyMOL image
show in jmol