Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1880:1881
Extra
PDB:
ATOM 1 O3' U A 879 46.218 -19.255 82.116 1.00 35.04 O
ATOM 2 P A A 880 47.319 -18.867 81.023 1.00 42.00 P
ATOM 3 OP1 A A 880 47.935 -20.108 80.579 1.00 42.06 O
ATOM 4 OP2 A A 880 48.177 -17.819 81.588 1.00 42.03 O
ATOM 5 O5' A A 880 46.465 -18.257 79.864 1.00 41.83 O
ATOM 6 C5' A A 880 45.257 -18.853 79.465 1.00 41.79 C
ATOM 7 C4' A A 880 44.427 -17.883 78.692 1.00 41.65 C
ATOM 8 O4' A A 880 44.011 -16.818 79.542 1.00 41.66 O
ATOM 9 C3' A A 880 45.139 -17.213 77.562 1.00 41.54 C
ATOM 10 O3' A A 880 44.984 -17.970 76.400 1.00 41.50 O
ATOM 11 C2' A A 880 44.454 -15.858 77.453 1.00 41.46 C
ATOM 12 O2' A A 880 43.443 -15.935 76.479 1.00 41.37 O
ATOM 13 C1' A A 880 43.778 -15.693 78.797 1.00 41.54 C
ATOM 14 N9 A A 880 44.241 -14.541 79.548 1.00 41.58 N
ATOM 15 C8 A A 880 45.279 -14.408 80.448 1.00 41.68 C
ATOM 16 N7 A A 880 45.347 -13.215 81.005 1.00 41.70 N
ATOM 17 C5 A A 880 44.251 -12.559 80.436 1.00 41.61 C
ATOM 18 C6 A A 880 43.747 -11.273 80.573 1.00 41.59 C
ATOM 19 N6 A A 880 44.297 -10.386 81.339 1.00 41.67 N
ATOM 20 N1 A A 880 42.650 -10.919 79.906 1.00 41.51 N
ATOM 21 C2 A A 880 42.082 -11.838 79.103 1.00 41.44 C
ATOM 22 N3 A A 880 42.449 -13.096 78.873 1.00 41.45 N
ATOM 23 C4 A A 880 43.559 -13.376 79.565 1.00 41.53 C
ATOM 24 P G A 881 46.217 -18.436 75.511 1.00 36.21 P
ATOM 25 OP1 G A 881 46.612 -19.748 75.996 1.00 36.33 O
ATOM 26 OP2 G A 881 47.207 -17.374 75.494 1.00 36.17 O
ATOM 27 O5' G A 881 45.535 -18.559 74.072 1.00 36.11 O
TER
ATOM 1 O3' A B 880 44.984 -17.970 76.400 1.00 41.50 O
ATOM 2 P G B 881 46.217 -18.436 75.511 1.00 36.21 P
ATOM 3 OP1 G B 881 46.612 -19.748 75.996 1.00 36.33 O
ATOM 4 OP2 G B 881 47.207 -17.374 75.494 1.00 36.17 O
ATOM 5 O5' G B 881 45.535 -18.559 74.072 1.00 36.11 O
ATOM 6 C5' G B 881 45.749 -19.716 73.296 1.00 36.15 C
ATOM 7 C4' G B 881 44.698 -19.935 72.234 1.00 36.10 C
ATOM 8 O4' G B 881 43.933 -21.128 72.535 1.00 36.18 O
ATOM 9 C3' G B 881 43.704 -18.828 72.001 1.00 36.00 C
ATOM 10 O3' G B 881 43.481 -18.763 70.616 1.00 35.95 O
ATOM 11 C2' G B 881 42.443 -19.351 72.682 1.00 36.05 C
ATOM 12 O2' G B 881 41.233 -18.869 72.129 1.00 35.99 O
ATOM 13 C1' G B 881 42.570 -20.851 72.472 1.00 36.14 C
ATOM 14 N9 G B 881 41.901 -21.662 73.492 1.00 36.24 N
ATOM 15 C8 G B 881 41.980 -21.520 74.844 1.00 36.30 C
ATOM 16 N7 G B 881 41.234 -22.392 75.459 1.00 36.40 N
ATOM 17 C5 G B 881 40.648 -23.143 74.414 1.00 36.40 C
ATOM 18 C6 G B 881 39.760 -24.245 74.431 1.00 36.50 C
ATOM 19 O6 G B 881 39.291 -24.792 75.427 1.00 36.61 O
ATOM 20 N1 G B 881 39.433 -24.686 73.156 1.00 36.49 N
ATOM 21 C2 G B 881 39.908 -24.107 72.007 1.00 36.39 C
ATOM 22 N2 G B 881 39.534 -24.597 70.824 1.00 36.40 N
ATOM 23 N3 G B 881 40.744 -23.099 72.006 1.00 36.30 N
ATOM 24 C4 G B 881 41.061 -22.691 73.220 1.00 36.31 C
ATOM 25 P C B 882 44.208 -17.649 69.756 1.00 32.14 P
ATOM 26 OP1 C B 882 43.799 -17.820 68.346 1.00 32.12 O
ATOM 27 OP2 C B 882 45.670 -17.737 70.091 1.00 32.18 O
ATOM 28 O5' C B 882 43.593 -16.296 70.341 1.00 32.08 O
TER
ATOM 2 P A A 880 47.319 -18.867 81.023 1.00 42.00 P
ATOM 3 OP1 A A 880 47.935 -20.108 80.579 1.00 42.06 O
ATOM 4 OP2 A A 880 48.177 -17.819 81.588 1.00 42.03 O
ATOM 5 O5' A A 880 46.465 -18.257 79.864 1.00 41.83 O
ATOM 6 C5' A A 880 45.257 -18.853 79.465 1.00 41.79 C
ATOM 7 C4' A A 880 44.427 -17.883 78.692 1.00 41.65 C
ATOM 8 O4' A A 880 44.011 -16.818 79.542 1.00 41.66 O
ATOM 9 C3' A A 880 45.139 -17.213 77.562 1.00 41.54 C
ATOM 10 O3' A A 880 44.984 -17.970 76.400 1.00 41.50 O
ATOM 11 C2' A A 880 44.454 -15.858 77.453 1.00 41.46 C
ATOM 12 O2' A A 880 43.443 -15.935 76.479 1.00 41.37 O
ATOM 13 C1' A A 880 43.778 -15.693 78.797 1.00 41.54 C
ATOM 14 N9 A A 880 44.241 -14.541 79.548 1.00 41.58 N
ATOM 15 C8 A A 880 45.279 -14.408 80.448 1.00 41.68 C
ATOM 16 N7 A A 880 45.347 -13.215 81.005 1.00 41.70 N
ATOM 17 C5 A A 880 44.251 -12.559 80.436 1.00 41.61 C
ATOM 18 C6 A A 880 43.747 -11.273 80.573 1.00 41.59 C
ATOM 19 N6 A A 880 44.297 -10.386 81.339 1.00 41.67 N
ATOM 20 N1 A A 880 42.650 -10.919 79.906 1.00 41.51 N
ATOM 21 C2 A A 880 42.082 -11.838 79.103 1.00 41.44 C
ATOM 22 N3 A A 880 42.449 -13.096 78.873 1.00 41.45 N
ATOM 23 C4 A A 880 43.559 -13.376 79.565 1.00 41.53 C
ATOM 24 P G A 881 46.217 -18.436 75.511 1.00 36.21 P
ATOM 25 OP1 G A 881 46.612 -19.748 75.996 1.00 36.33 O
ATOM 26 OP2 G A 881 47.207 -17.374 75.494 1.00 36.17 O
ATOM 27 O5' G A 881 45.535 -18.559 74.072 1.00 36.11 O
TER
ATOM 1 O3' A B 880 44.984 -17.970 76.400 1.00 41.50 O
ATOM 2 P G B 881 46.217 -18.436 75.511 1.00 36.21 P
ATOM 3 OP1 G B 881 46.612 -19.748 75.996 1.00 36.33 O
ATOM 4 OP2 G B 881 47.207 -17.374 75.494 1.00 36.17 O
ATOM 5 O5' G B 881 45.535 -18.559 74.072 1.00 36.11 O
ATOM 6 C5' G B 881 45.749 -19.716 73.296 1.00 36.15 C
ATOM 7 C4' G B 881 44.698 -19.935 72.234 1.00 36.10 C
ATOM 8 O4' G B 881 43.933 -21.128 72.535 1.00 36.18 O
ATOM 9 C3' G B 881 43.704 -18.828 72.001 1.00 36.00 C
ATOM 10 O3' G B 881 43.481 -18.763 70.616 1.00 35.95 O
ATOM 11 C2' G B 881 42.443 -19.351 72.682 1.00 36.05 C
ATOM 12 O2' G B 881 41.233 -18.869 72.129 1.00 35.99 O
ATOM 13 C1' G B 881 42.570 -20.851 72.472 1.00 36.14 C
ATOM 14 N9 G B 881 41.901 -21.662 73.492 1.00 36.24 N
ATOM 15 C8 G B 881 41.980 -21.520 74.844 1.00 36.30 C
ATOM 16 N7 G B 881 41.234 -22.392 75.459 1.00 36.40 N
ATOM 17 C5 G B 881 40.648 -23.143 74.414 1.00 36.40 C
ATOM 18 C6 G B 881 39.760 -24.245 74.431 1.00 36.50 C
ATOM 19 O6 G B 881 39.291 -24.792 75.427 1.00 36.61 O
ATOM 20 N1 G B 881 39.433 -24.686 73.156 1.00 36.49 N
ATOM 21 C2 G B 881 39.908 -24.107 72.007 1.00 36.39 C
ATOM 22 N2 G B 881 39.534 -24.597 70.824 1.00 36.40 N
ATOM 23 N3 G B 881 40.744 -23.099 72.006 1.00 36.30 N
ATOM 24 C4 G B 881 41.061 -22.691 73.220 1.00 36.31 C
ATOM 25 P C B 882 44.208 -17.649 69.756 1.00 32.14 P
ATOM 26 OP1 C B 882 43.799 -17.820 68.346 1.00 32.12 O
ATOM 27 OP2 C B 882 45.670 -17.737 70.091 1.00 32.18 O
ATOM 28 O5' C B 882 43.593 -16.296 70.341 1.00 32.08 O
TER
Atoms:
OP1: (47.935,-20.108,80.579)
OP2: (48.177,-17.819,81.588)
C3': (45.139,-17.213,77.562)
C1': (43.778,-15.693,78.797)
C5': (45.257,-18.853,79.465)
O4': (44.011,-16.818,79.542)
C8: (45.279,-14.408,80.448)
O2': (43.443,-15.935,76.479)
C6: (43.747,-11.273,80.573)
C5: (44.251,-12.559,80.436)
C4: (43.559,-13.376,79.565)
P: (47.319,-18.867,81.023)
C4': (44.427,-17.883,78.692)
C2': (44.454,-15.858,77.453)
C2: (42.082,-11.838,79.103)
N1: (42.650,-10.919,79.906)
N3: (42.449,-13.096,78.873)
N6: (44.297,-10.386,81.339)
N7: (45.347,-13.215,81.005)
N9: (44.241,-14.541,79.548)
O5': (46.465,-18.257,79.864)
O3': (44.984,-17.970,76.400)
OP2: (48.177,-17.819,81.588)
C3': (45.139,-17.213,77.562)
C1': (43.778,-15.693,78.797)
C5': (45.257,-18.853,79.465)
O4': (44.011,-16.818,79.542)
C8: (45.279,-14.408,80.448)
O2': (43.443,-15.935,76.479)
C6: (43.747,-11.273,80.573)
C5: (44.251,-12.559,80.436)
C4: (43.559,-13.376,79.565)
P: (47.319,-18.867,81.023)
C4': (44.427,-17.883,78.692)
C2': (44.454,-15.858,77.453)
C2: (42.082,-11.838,79.103)
N1: (42.650,-10.919,79.906)
N3: (42.449,-13.096,78.873)
N6: (44.297,-10.386,81.339)
N7: (45.347,-13.215,81.005)
N9: (44.241,-14.541,79.548)
O5': (46.465,-18.257,79.864)
O3': (44.984,-17.970,76.400)
OP1: (46.612,-19.748,75.996)
OP2: (47.207,-17.374,75.494)
C3': (43.704,-18.828,72.001)
C1': (42.570,-20.851,72.472)
C5': (45.749,-19.716,73.296)
O6: (39.291,-24.792,75.427)
O4': (43.933,-21.128,72.535)
C8: (41.980,-21.520,74.844)
C2: (39.908,-24.107,72.007)
C6: (39.760,-24.245,74.431)
C5: (40.648,-23.143,74.414)
C4: (41.061,-22.691,73.220)
P: (46.217,-18.436,75.511)
C4': (44.698,-19.935,72.234)
C2': (42.443,-19.351,72.682)
O2': (41.233,-18.869,72.129)
N1: (39.433,-24.686,73.156)
N2: (39.534,-24.597,70.824)
N3: (40.744,-23.099,72.006)
N7: (41.234,-22.392,75.459)
N9: (41.901,-21.662,73.492)
O5': (45.535,-18.559,74.072)
O3': (43.481,-18.763,70.616)
OP2: (47.207,-17.374,75.494)
C3': (43.704,-18.828,72.001)
C1': (42.570,-20.851,72.472)
C5': (45.749,-19.716,73.296)
O6: (39.291,-24.792,75.427)
O4': (43.933,-21.128,72.535)
C8: (41.980,-21.520,74.844)
C2: (39.908,-24.107,72.007)
C6: (39.760,-24.245,74.431)
C5: (40.648,-23.143,74.414)
C4: (41.061,-22.691,73.220)
P: (46.217,-18.436,75.511)
C4': (44.698,-19.935,72.234)
C2': (42.443,-19.351,72.682)
O2': (41.233,-18.869,72.129)
N1: (39.433,-24.686,73.156)
N2: (39.534,-24.597,70.824)
N3: (40.744,-23.099,72.006)
N7: (41.234,-22.392,75.459)
N9: (41.901,-21.662,73.492)
O5': (45.535,-18.559,74.072)
O3': (43.481,-18.763,70.616)
Image (generated by PyMOL):