Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:136:137
Extra
PDB:
ATOM 1 O3' U A 35 44.801 -26.656 83.196 1.00 32.71 O
ATOM 2 P A A 36 43.707 -26.560 82.010 1.00 34.43 P
ATOM 3 OP1 A A 36 44.434 -26.650 80.724 1.00 34.34 O
ATOM 4 OP2 A A 36 42.887 -25.373 82.292 1.00 34.32 O
ATOM 5 O5' A A 36 42.801 -27.838 82.224 1.00 34.58 O
ATOM 6 C5' A A 36 43.275 -29.132 81.954 1.00 34.71 C
ATOM 7 C4' A A 36 42.543 -30.149 82.767 1.00 34.91 C
ATOM 8 O4' A A 36 42.145 -29.560 84.004 1.00 34.96 O
ATOM 9 C3' A A 36 41.245 -30.612 82.191 1.00 34.89 C
ATOM 10 O3' A A 36 41.420 -31.549 81.161 1.00 34.92 O
ATOM 11 C2' A A 36 40.496 -31.153 83.402 1.00 35.07 C
ATOM 12 O2' A A 36 40.950 -32.452 83.722 1.00 35.29 O
ATOM 13 C1' A A 36 40.987 -30.213 84.487 1.00 35.07 C
ATOM 14 N9 A A 36 39.992 -29.216 84.889 1.00 34.98 N
ATOM 15 C8 A A 36 39.920 -27.953 84.414 1.00 34.78 C
ATOM 16 N7 A A 36 38.907 -27.329 84.921 1.00 34.76 N
ATOM 17 C5 A A 36 38.305 -28.158 85.773 1.00 34.95 C
ATOM 18 C6 A A 36 37.194 -27.954 86.538 1.00 35.02 C
ATOM 19 N6 A A 36 36.551 -26.786 86.558 1.00 34.90 N
ATOM 20 N1 A A 36 36.793 -28.992 87.285 1.00 35.24 N
ATOM 21 C2 A A 36 37.488 -30.124 87.195 1.00 35.36 C
ATOM 22 N3 A A 36 38.573 -30.421 86.474 1.00 35.31 N
ATOM 23 C4 A A 36 38.949 -29.357 85.773 1.00 35.10 C
ATOM 24 P A A 37 40.196 -31.853 80.185 1.00 31.53 P
ATOM 25 OP1 A A 37 39.079 -32.224 81.045 1.00 31.65 O
ATOM 26 OP2 A A 37 40.693 -32.827 79.133 1.00 31.59 O
ATOM 27 O5' A A 37 39.945 -30.432 79.550 1.00 31.29 O
TER
ATOM 1 O3' A B 36 41.420 -31.549 81.161 1.00 34.92 O
ATOM 2 P A B 37 40.196 -31.853 80.185 1.00 31.53 P
ATOM 3 OP1 A B 37 39.079 -32.224 81.045 1.00 31.65 O
ATOM 4 OP2 A B 37 40.693 -32.827 79.133 1.00 31.59 O
ATOM 5 O5' A B 37 39.945 -30.432 79.550 1.00 31.29 O
ATOM 6 C5' A B 37 40.864 -29.875 78.649 1.00 31.15 C
ATOM 7 C4' A B 37 41.088 -28.437 78.950 1.00 31.00 C
ATOM 8 O4' A B 37 41.952 -27.869 77.943 1.00 30.87 O
ATOM 9 C3' A B 37 39.835 -27.567 78.976 1.00 30.89 C
ATOM 10 O3' A B 37 39.857 -26.732 80.127 1.00 30.89 O
ATOM 11 C2' A B 37 40.000 -26.701 77.726 1.00 30.71 C
ATOM 12 O2' A B 37 39.404 -25.412 77.779 1.00 30.57 O
ATOM 13 C1' A B 37 41.491 -26.608 77.612 1.00 30.70 C
ATOM 14 N9 A B 37 41.947 -26.298 76.278 1.00 30.58 N
ATOM 15 C8 A B 37 42.791 -25.278 76.023 1.00 30.47 C
ATOM 16 N7 A B 37 43.058 -25.135 74.778 1.00 30.39 N
ATOM 17 C5 A B 37 42.370 -26.156 74.138 1.00 30.45 C
ATOM 18 C6 A B 37 42.304 -26.529 72.774 1.00 30.43 C
ATOM 19 N6 A B 37 42.971 -25.871 71.801 1.00 30.33 N
ATOM 20 N1 A B 37 41.465 -27.550 72.461 1.00 30.53 N
ATOM 21 C2 A B 37 40.836 -28.173 73.459 1.00 30.64 C
ATOM 22 N3 A B 37 40.843 -27.934 74.761 1.00 30.67 N
ATOM 23 C4 A B 37 41.629 -26.879 75.056 1.00 30.57 C
ATOM 24 P G B 38 38.678 -26.830 81.216 1.00 36.19 P
ATOM 25 OP1 G B 38 38.934 -25.784 82.187 1.00 36.18 O
ATOM 26 OP2 G B 38 38.632 -28.223 81.692 1.00 36.39 O
ATOM 27 O5' G B 38 37.369 -26.458 80.365 1.00 36.08 O
TER
ATOM 2 P A A 36 43.707 -26.560 82.010 1.00 34.43 P
ATOM 3 OP1 A A 36 44.434 -26.650 80.724 1.00 34.34 O
ATOM 4 OP2 A A 36 42.887 -25.373 82.292 1.00 34.32 O
ATOM 5 O5' A A 36 42.801 -27.838 82.224 1.00 34.58 O
ATOM 6 C5' A A 36 43.275 -29.132 81.954 1.00 34.71 C
ATOM 7 C4' A A 36 42.543 -30.149 82.767 1.00 34.91 C
ATOM 8 O4' A A 36 42.145 -29.560 84.004 1.00 34.96 O
ATOM 9 C3' A A 36 41.245 -30.612 82.191 1.00 34.89 C
ATOM 10 O3' A A 36 41.420 -31.549 81.161 1.00 34.92 O
ATOM 11 C2' A A 36 40.496 -31.153 83.402 1.00 35.07 C
ATOM 12 O2' A A 36 40.950 -32.452 83.722 1.00 35.29 O
ATOM 13 C1' A A 36 40.987 -30.213 84.487 1.00 35.07 C
ATOM 14 N9 A A 36 39.992 -29.216 84.889 1.00 34.98 N
ATOM 15 C8 A A 36 39.920 -27.953 84.414 1.00 34.78 C
ATOM 16 N7 A A 36 38.907 -27.329 84.921 1.00 34.76 N
ATOM 17 C5 A A 36 38.305 -28.158 85.773 1.00 34.95 C
ATOM 18 C6 A A 36 37.194 -27.954 86.538 1.00 35.02 C
ATOM 19 N6 A A 36 36.551 -26.786 86.558 1.00 34.90 N
ATOM 20 N1 A A 36 36.793 -28.992 87.285 1.00 35.24 N
ATOM 21 C2 A A 36 37.488 -30.124 87.195 1.00 35.36 C
ATOM 22 N3 A A 36 38.573 -30.421 86.474 1.00 35.31 N
ATOM 23 C4 A A 36 38.949 -29.357 85.773 1.00 35.10 C
ATOM 24 P A A 37 40.196 -31.853 80.185 1.00 31.53 P
ATOM 25 OP1 A A 37 39.079 -32.224 81.045 1.00 31.65 O
ATOM 26 OP2 A A 37 40.693 -32.827 79.133 1.00 31.59 O
ATOM 27 O5' A A 37 39.945 -30.432 79.550 1.00 31.29 O
TER
ATOM 1 O3' A B 36 41.420 -31.549 81.161 1.00 34.92 O
ATOM 2 P A B 37 40.196 -31.853 80.185 1.00 31.53 P
ATOM 3 OP1 A B 37 39.079 -32.224 81.045 1.00 31.65 O
ATOM 4 OP2 A B 37 40.693 -32.827 79.133 1.00 31.59 O
ATOM 5 O5' A B 37 39.945 -30.432 79.550 1.00 31.29 O
ATOM 6 C5' A B 37 40.864 -29.875 78.649 1.00 31.15 C
ATOM 7 C4' A B 37 41.088 -28.437 78.950 1.00 31.00 C
ATOM 8 O4' A B 37 41.952 -27.869 77.943 1.00 30.87 O
ATOM 9 C3' A B 37 39.835 -27.567 78.976 1.00 30.89 C
ATOM 10 O3' A B 37 39.857 -26.732 80.127 1.00 30.89 O
ATOM 11 C2' A B 37 40.000 -26.701 77.726 1.00 30.71 C
ATOM 12 O2' A B 37 39.404 -25.412 77.779 1.00 30.57 O
ATOM 13 C1' A B 37 41.491 -26.608 77.612 1.00 30.70 C
ATOM 14 N9 A B 37 41.947 -26.298 76.278 1.00 30.58 N
ATOM 15 C8 A B 37 42.791 -25.278 76.023 1.00 30.47 C
ATOM 16 N7 A B 37 43.058 -25.135 74.778 1.00 30.39 N
ATOM 17 C5 A B 37 42.370 -26.156 74.138 1.00 30.45 C
ATOM 18 C6 A B 37 42.304 -26.529 72.774 1.00 30.43 C
ATOM 19 N6 A B 37 42.971 -25.871 71.801 1.00 30.33 N
ATOM 20 N1 A B 37 41.465 -27.550 72.461 1.00 30.53 N
ATOM 21 C2 A B 37 40.836 -28.173 73.459 1.00 30.64 C
ATOM 22 N3 A B 37 40.843 -27.934 74.761 1.00 30.67 N
ATOM 23 C4 A B 37 41.629 -26.879 75.056 1.00 30.57 C
ATOM 24 P G B 38 38.678 -26.830 81.216 1.00 36.19 P
ATOM 25 OP1 G B 38 38.934 -25.784 82.187 1.00 36.18 O
ATOM 26 OP2 G B 38 38.632 -28.223 81.692 1.00 36.39 O
ATOM 27 O5' G B 38 37.369 -26.458 80.365 1.00 36.08 O
TER
Atoms:
OP1: (44.434,-26.650,80.724)
OP2: (42.887,-25.373,82.292)
C3': (41.245,-30.612,82.191)
C1': (40.987,-30.213,84.487)
C5': (43.275,-29.132,81.954)
O4': (42.145,-29.560,84.004)
C8: (39.920,-27.953,84.414)
O2': (40.950,-32.452,83.722)
C6: (37.194,-27.954,86.538)
C5: (38.305,-28.158,85.773)
C4: (38.949,-29.357,85.773)
P: (43.707,-26.560,82.010)
C4': (42.543,-30.149,82.767)
C2': (40.496,-31.153,83.402)
C2: (37.488,-30.124,87.195)
N1: (36.793,-28.992,87.285)
N3: (38.573,-30.421,86.474)
N6: (36.551,-26.786,86.558)
N7: (38.907,-27.329,84.921)
N9: (39.992,-29.216,84.889)
O5': (42.801,-27.838,82.224)
O3': (41.420,-31.549,81.161)
OP2: (42.887,-25.373,82.292)
C3': (41.245,-30.612,82.191)
C1': (40.987,-30.213,84.487)
C5': (43.275,-29.132,81.954)
O4': (42.145,-29.560,84.004)
C8: (39.920,-27.953,84.414)
O2': (40.950,-32.452,83.722)
C6: (37.194,-27.954,86.538)
C5: (38.305,-28.158,85.773)
C4: (38.949,-29.357,85.773)
P: (43.707,-26.560,82.010)
C4': (42.543,-30.149,82.767)
C2': (40.496,-31.153,83.402)
C2: (37.488,-30.124,87.195)
N1: (36.793,-28.992,87.285)
N3: (38.573,-30.421,86.474)
N6: (36.551,-26.786,86.558)
N7: (38.907,-27.329,84.921)
N9: (39.992,-29.216,84.889)
O5': (42.801,-27.838,82.224)
O3': (41.420,-31.549,81.161)
OP1: (39.079,-32.224,81.045)
OP2: (40.693,-32.827,79.133)
C3': (39.835,-27.567,78.976)
C1': (41.491,-26.608,77.612)
C5': (40.864,-29.875,78.649)
O4': (41.952,-27.869,77.943)
C8: (42.791,-25.278,76.023)
O2': (39.404,-25.412,77.779)
C6: (42.304,-26.529,72.774)
C5: (42.370,-26.156,74.138)
C4: (41.629,-26.879,75.056)
P: (40.196,-31.853,80.185)
C4': (41.088,-28.437,78.950)
C2': (40.000,-26.701,77.726)
C2: (40.836,-28.173,73.459)
N1: (41.465,-27.550,72.461)
N3: (40.843,-27.934,74.761)
N6: (42.971,-25.871,71.801)
N7: (43.058,-25.135,74.778)
N9: (41.947,-26.298,76.278)
O5': (39.945,-30.432,79.550)
O3': (39.857,-26.732,80.127)
OP2: (40.693,-32.827,79.133)
C3': (39.835,-27.567,78.976)
C1': (41.491,-26.608,77.612)
C5': (40.864,-29.875,78.649)
O4': (41.952,-27.869,77.943)
C8: (42.791,-25.278,76.023)
O2': (39.404,-25.412,77.779)
C6: (42.304,-26.529,72.774)
C5: (42.370,-26.156,74.138)
C4: (41.629,-26.879,75.056)
P: (40.196,-31.853,80.185)
C4': (41.088,-28.437,78.950)
C2': (40.000,-26.701,77.726)
C2: (40.836,-28.173,73.459)
N1: (41.465,-27.550,72.461)
N3: (40.843,-27.934,74.761)
N6: (42.971,-25.871,71.801)
N7: (43.058,-25.135,74.778)
N9: (41.947,-26.298,76.278)
O5': (39.945,-30.432,79.550)
O3': (39.857,-26.732,80.127)
Image (generated by PyMOL):