Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J03:A2008:A2103
Extra
PDB:
ATOM 1 O3' U A2007 -62.407 -13.896 70.597 1.00 0.79 O
ATOM 2 P U A2008 -61.847 -12.382 70.706 1.00 19.66 P
ATOM 3 OP1 U A2008 -61.191 -12.021 69.424 1.00 42.60 O
ATOM 4 OP2 U A2008 -61.068 -12.308 71.961 1.00 42.60 O
ATOM 5 O5' U A2008 -63.182 -11.518 70.892 1.00 17.39 O
ATOM 6 C5' U A2008 -63.195 -10.320 71.695 1.00 17.39 C
ATOM 7 C4' U A2008 -64.496 -9.574 71.520 1.00 17.39 C
ATOM 8 O4' U A2008 -64.611 -9.066 70.161 1.00 17.39 O
ATOM 9 C3' U A2008 -65.760 -10.383 71.785 1.00 17.39 C
ATOM 10 O3' U A2008 -66.763 -9.534 72.347 1.00 17.39 O
ATOM 11 C2' U A2008 -66.232 -10.729 70.379 1.00 17.39 C
ATOM 12 O2' U A2008 -67.621 -10.944 70.302 1.00 17.39 O
ATOM 13 C1' U A2008 -65.863 -9.452 69.630 1.00 17.39 C
ATOM 14 N1 U A2008 -65.767 -9.600 68.171 1.00 42.09 N
ATOM 15 C2 U A2008 -64.585 -10.066 67.634 1.00 42.09 C
ATOM 16 O2 U A2008 -63.610 -10.326 68.316 1.00 42.09 O
ATOM 17 N3 U A2008 -64.581 -10.216 66.271 1.00 42.09 N
ATOM 18 C4 U A2008 -65.609 -9.947 65.411 1.00 42.09 C
ATOM 19 O4 U A2008 -65.450 -10.145 64.203 1.00 42.09 O
ATOM 20 C5 U A2008 -66.801 -9.450 66.043 1.00 42.09 C
ATOM 21 C6 U A2008 -66.834 -9.295 67.365 1.00 42.09 C
ATOM 22 P G A2009 -66.592 -8.960 73.832 1.00 10.51 P
ATOM 23 OP1 G A2009 -66.174 -10.062 74.714 1.00 31.07 O
ATOM 24 OP2 G A2009 -67.835 -8.223 74.132 1.00 31.10 O
ATOM 25 O5' G A2009 -65.355 -7.965 73.717 1.00 17.55 O
TER
ATOM 1 O3' A B2102 -67.964 -5.352 63.992 1.00 8.04 O
ATOM 2 P C B2103 -67.809 -6.922 63.655 1.00 53.98 P
ATOM 3 OP1 C B2103 -69.002 -7.617 64.221 1.00 57.87 O
ATOM 4 OP2 C B2103 -66.461 -7.424 63.962 1.00 58.09 O
ATOM 5 O5' C B2103 -67.919 -6.956 62.075 1.00 25.15 O
ATOM 6 C5' C B2103 -68.644 -5.937 61.391 1.00 25.15 C
ATOM 7 C4' C B2103 -67.965 -5.581 60.093 1.00 25.15 C
ATOM 8 O4' C B2103 -66.698 -4.924 60.342 1.00 25.15 O
ATOM 9 C3' C B2103 -67.608 -6.728 59.169 1.00 25.15 C
ATOM 10 O3' C B2103 -68.719 -7.213 58.420 1.00 25.15 O
ATOM 11 C2' C B2103 -66.540 -6.101 58.291 1.00 25.15 C
ATOM 12 O2' C B2103 -67.138 -5.259 57.327 1.00 25.15 O
ATOM 13 C1' C B2103 -65.790 -5.235 59.298 1.00 25.15 C
ATOM 14 N1 C B2103 -64.652 -5.962 59.874 1.00 13.89 N
ATOM 15 C2 C B2103 -63.435 -5.957 59.207 1.00 13.93 C
ATOM 16 O2 C B2103 -63.331 -5.310 58.166 1.00 13.99 O
ATOM 17 N3 C B2103 -62.396 -6.656 59.713 1.00 13.91 N
ATOM 18 C4 C B2103 -62.546 -7.333 60.845 1.00 13.90 C
ATOM 19 N4 C B2103 -61.512 -8.024 61.306 1.00 13.95 N
ATOM 20 C5 C B2103 -63.768 -7.339 61.557 1.00 13.85 C
ATOM 21 C6 C B2103 -64.788 -6.648 61.042 1.00 13.78 C
ATOM 22 P A B2104 -68.673 -8.713 57.844 1.00 14.03 P
ATOM 23 OP1 A B2104 -70.039 -9.131 57.437 1.00 31.15 O
ATOM 24 OP2 A B2104 -67.920 -9.540 58.828 1.00 31.03 O
ATOM 25 O5' A B2104 -67.765 -8.546 56.547 1.00 4.08 O
TER
ATOM 2 P U A2008 -61.847 -12.382 70.706 1.00 19.66 P
ATOM 3 OP1 U A2008 -61.191 -12.021 69.424 1.00 42.60 O
ATOM 4 OP2 U A2008 -61.068 -12.308 71.961 1.00 42.60 O
ATOM 5 O5' U A2008 -63.182 -11.518 70.892 1.00 17.39 O
ATOM 6 C5' U A2008 -63.195 -10.320 71.695 1.00 17.39 C
ATOM 7 C4' U A2008 -64.496 -9.574 71.520 1.00 17.39 C
ATOM 8 O4' U A2008 -64.611 -9.066 70.161 1.00 17.39 O
ATOM 9 C3' U A2008 -65.760 -10.383 71.785 1.00 17.39 C
ATOM 10 O3' U A2008 -66.763 -9.534 72.347 1.00 17.39 O
ATOM 11 C2' U A2008 -66.232 -10.729 70.379 1.00 17.39 C
ATOM 12 O2' U A2008 -67.621 -10.944 70.302 1.00 17.39 O
ATOM 13 C1' U A2008 -65.863 -9.452 69.630 1.00 17.39 C
ATOM 14 N1 U A2008 -65.767 -9.600 68.171 1.00 42.09 N
ATOM 15 C2 U A2008 -64.585 -10.066 67.634 1.00 42.09 C
ATOM 16 O2 U A2008 -63.610 -10.326 68.316 1.00 42.09 O
ATOM 17 N3 U A2008 -64.581 -10.216 66.271 1.00 42.09 N
ATOM 18 C4 U A2008 -65.609 -9.947 65.411 1.00 42.09 C
ATOM 19 O4 U A2008 -65.450 -10.145 64.203 1.00 42.09 O
ATOM 20 C5 U A2008 -66.801 -9.450 66.043 1.00 42.09 C
ATOM 21 C6 U A2008 -66.834 -9.295 67.365 1.00 42.09 C
ATOM 22 P G A2009 -66.592 -8.960 73.832 1.00 10.51 P
ATOM 23 OP1 G A2009 -66.174 -10.062 74.714 1.00 31.07 O
ATOM 24 OP2 G A2009 -67.835 -8.223 74.132 1.00 31.10 O
ATOM 25 O5' G A2009 -65.355 -7.965 73.717 1.00 17.55 O
TER
ATOM 1 O3' A B2102 -67.964 -5.352 63.992 1.00 8.04 O
ATOM 2 P C B2103 -67.809 -6.922 63.655 1.00 53.98 P
ATOM 3 OP1 C B2103 -69.002 -7.617 64.221 1.00 57.87 O
ATOM 4 OP2 C B2103 -66.461 -7.424 63.962 1.00 58.09 O
ATOM 5 O5' C B2103 -67.919 -6.956 62.075 1.00 25.15 O
ATOM 6 C5' C B2103 -68.644 -5.937 61.391 1.00 25.15 C
ATOM 7 C4' C B2103 -67.965 -5.581 60.093 1.00 25.15 C
ATOM 8 O4' C B2103 -66.698 -4.924 60.342 1.00 25.15 O
ATOM 9 C3' C B2103 -67.608 -6.728 59.169 1.00 25.15 C
ATOM 10 O3' C B2103 -68.719 -7.213 58.420 1.00 25.15 O
ATOM 11 C2' C B2103 -66.540 -6.101 58.291 1.00 25.15 C
ATOM 12 O2' C B2103 -67.138 -5.259 57.327 1.00 25.15 O
ATOM 13 C1' C B2103 -65.790 -5.235 59.298 1.00 25.15 C
ATOM 14 N1 C B2103 -64.652 -5.962 59.874 1.00 13.89 N
ATOM 15 C2 C B2103 -63.435 -5.957 59.207 1.00 13.93 C
ATOM 16 O2 C B2103 -63.331 -5.310 58.166 1.00 13.99 O
ATOM 17 N3 C B2103 -62.396 -6.656 59.713 1.00 13.91 N
ATOM 18 C4 C B2103 -62.546 -7.333 60.845 1.00 13.90 C
ATOM 19 N4 C B2103 -61.512 -8.024 61.306 1.00 13.95 N
ATOM 20 C5 C B2103 -63.768 -7.339 61.557 1.00 13.85 C
ATOM 21 C6 C B2103 -64.788 -6.648 61.042 1.00 13.78 C
ATOM 22 P A B2104 -68.673 -8.713 57.844 1.00 14.03 P
ATOM 23 OP1 A B2104 -70.039 -9.131 57.437 1.00 31.15 O
ATOM 24 OP2 A B2104 -67.920 -9.540 58.828 1.00 31.03 O
ATOM 25 O5' A B2104 -67.765 -8.546 56.547 1.00 4.08 O
TER
Atoms:
C4: (-65.609,-9.947,65.411)
N3: (-64.581,-10.216,66.271)
OP1: (-61.191,-12.021,69.424)
OP2: (-61.068,-12.308,71.961)
C2: (-64.585,-10.066,67.634)
C1': (-65.863,-9.452,69.630)
C3': (-65.760,-10.383,71.785)
O5': (-63.182,-11.518,70.892)
O4': (-64.611,-9.066,70.161)
C5': (-63.195,-10.320,71.695)
P: (-61.847,-12.382,70.706)
C4': (-64.496,-9.574,71.520)
C2': (-66.232,-10.729,70.379)
O2': (-67.621,-10.944,70.302)
N1: (-65.767,-9.600,68.171)
O4: (-65.450,-10.145,64.203)
O2: (-63.610,-10.326,68.316)
C6: (-66.834,-9.295,67.365)
C5: (-66.801,-9.450,66.043)
O3': (-66.763,-9.534,72.347)
N3: (-64.581,-10.216,66.271)
OP1: (-61.191,-12.021,69.424)
OP2: (-61.068,-12.308,71.961)
C2: (-64.585,-10.066,67.634)
C1': (-65.863,-9.452,69.630)
C3': (-65.760,-10.383,71.785)
O5': (-63.182,-11.518,70.892)
O4': (-64.611,-9.066,70.161)
C5': (-63.195,-10.320,71.695)
P: (-61.847,-12.382,70.706)
C4': (-64.496,-9.574,71.520)
C2': (-66.232,-10.729,70.379)
O2': (-67.621,-10.944,70.302)
N1: (-65.767,-9.600,68.171)
O4: (-65.450,-10.145,64.203)
O2: (-63.610,-10.326,68.316)
C6: (-66.834,-9.295,67.365)
C5: (-66.801,-9.450,66.043)
O3': (-66.763,-9.534,72.347)
C2: (-63.435,-5.957,59.207)
OP1: (-69.002,-7.617,64.221)
OP2: (-66.461,-7.424,63.962)
C4: (-62.546,-7.333,60.845)
O5': (-67.919,-6.956,62.075)
C3': (-67.608,-6.728,59.169)
C1': (-65.790,-5.235,59.298)
O4': (-66.698,-4.924,60.342)
C5': (-68.644,-5.937,61.391)
P: (-67.809,-6.922,63.655)
O2: (-63.331,-5.310,58.166)
C4': (-67.965,-5.581,60.093)
C2': (-66.540,-6.101,58.291)
O2': (-67.138,-5.259,57.327)
N1: (-64.652,-5.962,59.874)
N3: (-62.396,-6.656,59.713)
N4: (-61.512,-8.024,61.306)
C6: (-64.788,-6.648,61.042)
C5: (-63.768,-7.339,61.557)
O3': (-68.719,-7.213,58.420)
OP1: (-69.002,-7.617,64.221)
OP2: (-66.461,-7.424,63.962)
C4: (-62.546,-7.333,60.845)
O5': (-67.919,-6.956,62.075)
C3': (-67.608,-6.728,59.169)
C1': (-65.790,-5.235,59.298)
O4': (-66.698,-4.924,60.342)
C5': (-68.644,-5.937,61.391)
P: (-67.809,-6.922,63.655)
O2: (-63.331,-5.310,58.166)
C4': (-67.965,-5.581,60.093)
C2': (-66.540,-6.101,58.291)
O2': (-67.138,-5.259,57.327)
N1: (-64.652,-5.962,59.874)
N3: (-62.396,-6.656,59.713)
N4: (-61.512,-8.024,61.306)
C6: (-64.788,-6.648,61.042)
C5: (-63.768,-7.339,61.557)
O3': (-68.719,-7.213,58.420)
Image (generated by PyMOL):