Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2OTJ:0258:0228
Extra
PDB:
ATOM 1 O3' G A 257 79.099 104.001 -0.315 1.00 59.06 O
ATOM 2 P U A 258 77.649 103.986 0.381 1.00 60.41 P
ATOM 3 OP1 U A 258 76.914 102.769 -0.048 1.00 60.79 O
ATOM 4 OP2 U A 258 77.035 105.325 0.150 1.00 61.27 O
ATOM 5 O5' U A 258 77.997 103.826 1.929 1.00 61.49 O
ATOM 6 C5' U A 258 78.722 102.673 2.402 1.00 64.02 C
ATOM 7 C4' U A 258 78.957 102.766 3.894 1.00 65.95 C
ATOM 8 O4' U A 258 80.036 103.707 4.182 1.00 64.58 O
ATOM 9 C3' U A 258 77.758 103.220 4.728 1.00 67.58 C
ATOM 10 O3' U A 258 77.744 102.531 5.987 1.00 72.15 O
ATOM 11 C2' U A 258 78.067 104.700 4.948 1.00 65.87 C
ATOM 12 O2' U A 258 77.414 105.238 6.082 1.00 65.58 O
ATOM 13 C1' U A 258 79.584 104.646 5.132 1.00 64.02 C
ATOM 14 N1 U A 258 80.330 105.905 4.971 1.00 62.11 N
ATOM 15 C2 U A 258 81.670 105.895 5.326 1.00 61.17 C
ATOM 16 O2 U A 258 82.248 104.889 5.686 1.00 60.27 O
ATOM 17 N3 U A 258 82.306 107.109 5.239 1.00 60.80 N
ATOM 18 C4 U A 258 81.755 108.310 4.833 1.00 60.70 C
ATOM 19 O4 U A 258 82.429 109.341 4.914 1.00 60.91 O
ATOM 20 C5 U A 258 80.376 108.233 4.441 1.00 60.13 C
ATOM 21 C6 U A 258 79.728 107.062 4.519 1.00 61.19 C
ATOM 22 P C A 259 76.364 101.909 6.553 1.00 75.49 P
ATOM 23 OP1 C A 259 75.273 102.920 6.444 1.00 74.91 O
ATOM 24 OP2 C A 259 76.680 101.307 7.877 1.00 75.15 O
ATOM 25 O5' C A 259 76.023 100.711 5.556 1.00 77.94 O
TER
ATOM 1 O3' C B 227 77.123 112.509 4.373 1.00 54.08 O
ATOM 2 P C B 228 78.598 112.172 3.816 1.00 53.74 P
ATOM 3 OP1 C B 228 78.758 113.009 2.595 1.00 53.72 O
ATOM 4 OP2 C B 228 78.797 110.699 3.731 1.00 55.07 O
ATOM 5 O5' C B 228 79.568 112.716 4.959 1.00 53.83 O
ATOM 6 C5' C B 228 80.950 112.347 4.983 1.00 53.35 C
ATOM 7 C4' C B 228 81.521 112.557 6.358 1.00 53.73 C
ATOM 8 O4' C B 228 80.804 111.733 7.311 1.00 53.35 O
ATOM 9 C3' C B 228 82.977 112.140 6.508 1.00 54.35 C
ATOM 10 O3' C B 228 83.833 113.220 6.111 1.00 55.55 O
ATOM 11 C2' C B 228 83.093 111.862 8.005 1.00 54.14 C
ATOM 12 O2' C B 228 83.312 113.040 8.761 1.00 55.04 O
ATOM 13 C1' C B 228 81.698 111.310 8.333 1.00 53.46 C
ATOM 14 N1 C B 228 81.605 109.843 8.480 1.00 52.23 N
ATOM 15 C2 C B 228 82.609 109.158 9.199 1.00 51.96 C
ATOM 16 O2 C B 228 83.534 109.804 9.710 1.00 51.33 O
ATOM 17 N3 C B 228 82.536 107.811 9.316 1.00 51.61 N
ATOM 18 C4 C B 228 81.518 107.147 8.755 1.00 51.72 C
ATOM 19 N4 C B 228 81.500 105.822 8.873 1.00 51.93 N
ATOM 20 C5 C B 228 80.475 107.817 8.041 1.00 51.49 C
ATOM 21 C6 C B 228 80.559 109.150 7.929 1.00 52.27 C
ATOM 22 P A B 229 85.080 112.952 5.128 1.00 55.82 P
ATOM 23 OP1 A B 229 85.761 114.258 4.933 1.00 55.49 O
ATOM 24 OP2 A B 229 84.581 112.202 3.944 1.00 56.22 O
ATOM 25 O5' A B 229 86.042 112.016 5.983 1.00 54.99 O
TER
ATOM 2 P U A 258 77.649 103.986 0.381 1.00 60.41 P
ATOM 3 OP1 U A 258 76.914 102.769 -0.048 1.00 60.79 O
ATOM 4 OP2 U A 258 77.035 105.325 0.150 1.00 61.27 O
ATOM 5 O5' U A 258 77.997 103.826 1.929 1.00 61.49 O
ATOM 6 C5' U A 258 78.722 102.673 2.402 1.00 64.02 C
ATOM 7 C4' U A 258 78.957 102.766 3.894 1.00 65.95 C
ATOM 8 O4' U A 258 80.036 103.707 4.182 1.00 64.58 O
ATOM 9 C3' U A 258 77.758 103.220 4.728 1.00 67.58 C
ATOM 10 O3' U A 258 77.744 102.531 5.987 1.00 72.15 O
ATOM 11 C2' U A 258 78.067 104.700 4.948 1.00 65.87 C
ATOM 12 O2' U A 258 77.414 105.238 6.082 1.00 65.58 O
ATOM 13 C1' U A 258 79.584 104.646 5.132 1.00 64.02 C
ATOM 14 N1 U A 258 80.330 105.905 4.971 1.00 62.11 N
ATOM 15 C2 U A 258 81.670 105.895 5.326 1.00 61.17 C
ATOM 16 O2 U A 258 82.248 104.889 5.686 1.00 60.27 O
ATOM 17 N3 U A 258 82.306 107.109 5.239 1.00 60.80 N
ATOM 18 C4 U A 258 81.755 108.310 4.833 1.00 60.70 C
ATOM 19 O4 U A 258 82.429 109.341 4.914 1.00 60.91 O
ATOM 20 C5 U A 258 80.376 108.233 4.441 1.00 60.13 C
ATOM 21 C6 U A 258 79.728 107.062 4.519 1.00 61.19 C
ATOM 22 P C A 259 76.364 101.909 6.553 1.00 75.49 P
ATOM 23 OP1 C A 259 75.273 102.920 6.444 1.00 74.91 O
ATOM 24 OP2 C A 259 76.680 101.307 7.877 1.00 75.15 O
ATOM 25 O5' C A 259 76.023 100.711 5.556 1.00 77.94 O
TER
ATOM 1 O3' C B 227 77.123 112.509 4.373 1.00 54.08 O
ATOM 2 P C B 228 78.598 112.172 3.816 1.00 53.74 P
ATOM 3 OP1 C B 228 78.758 113.009 2.595 1.00 53.72 O
ATOM 4 OP2 C B 228 78.797 110.699 3.731 1.00 55.07 O
ATOM 5 O5' C B 228 79.568 112.716 4.959 1.00 53.83 O
ATOM 6 C5' C B 228 80.950 112.347 4.983 1.00 53.35 C
ATOM 7 C4' C B 228 81.521 112.557 6.358 1.00 53.73 C
ATOM 8 O4' C B 228 80.804 111.733 7.311 1.00 53.35 O
ATOM 9 C3' C B 228 82.977 112.140 6.508 1.00 54.35 C
ATOM 10 O3' C B 228 83.833 113.220 6.111 1.00 55.55 O
ATOM 11 C2' C B 228 83.093 111.862 8.005 1.00 54.14 C
ATOM 12 O2' C B 228 83.312 113.040 8.761 1.00 55.04 O
ATOM 13 C1' C B 228 81.698 111.310 8.333 1.00 53.46 C
ATOM 14 N1 C B 228 81.605 109.843 8.480 1.00 52.23 N
ATOM 15 C2 C B 228 82.609 109.158 9.199 1.00 51.96 C
ATOM 16 O2 C B 228 83.534 109.804 9.710 1.00 51.33 O
ATOM 17 N3 C B 228 82.536 107.811 9.316 1.00 51.61 N
ATOM 18 C4 C B 228 81.518 107.147 8.755 1.00 51.72 C
ATOM 19 N4 C B 228 81.500 105.822 8.873 1.00 51.93 N
ATOM 20 C5 C B 228 80.475 107.817 8.041 1.00 51.49 C
ATOM 21 C6 C B 228 80.559 109.150 7.929 1.00 52.27 C
ATOM 22 P A B 229 85.080 112.952 5.128 1.00 55.82 P
ATOM 23 OP1 A B 229 85.761 114.258 4.933 1.00 55.49 O
ATOM 24 OP2 A B 229 84.581 112.202 3.944 1.00 56.22 O
ATOM 25 O5' A B 229 86.042 112.016 5.983 1.00 54.99 O
TER
Atoms:
C4: (81.755,108.310,4.833)
N3: (82.306,107.109,5.239)
OP1: (76.914,102.769,-0.048)
OP2: (77.035,105.325,0.150)
C2: (81.670,105.895,5.326)
C1': (79.584,104.646,5.132)
C3': (77.758,103.220,4.728)
O5': (77.997,103.826,1.929)
O4': (80.036,103.707,4.182)
C5': (78.722,102.673,2.402)
P: (77.649,103.986,0.381)
C4': (78.957,102.766,3.894)
C2': (78.067,104.700,4.948)
O2': (77.414,105.238,6.082)
N1: (80.330,105.905,4.971)
O4: (82.429,109.341,4.914)
O2: (82.248,104.889,5.686)
C6: (79.728,107.062,4.519)
C5: (80.376,108.233,4.441)
O3': (77.744,102.531,5.987)
N3: (82.306,107.109,5.239)
OP1: (76.914,102.769,-0.048)
OP2: (77.035,105.325,0.150)
C2: (81.670,105.895,5.326)
C1': (79.584,104.646,5.132)
C3': (77.758,103.220,4.728)
O5': (77.997,103.826,1.929)
O4': (80.036,103.707,4.182)
C5': (78.722,102.673,2.402)
P: (77.649,103.986,0.381)
C4': (78.957,102.766,3.894)
C2': (78.067,104.700,4.948)
O2': (77.414,105.238,6.082)
N1: (80.330,105.905,4.971)
O4: (82.429,109.341,4.914)
O2: (82.248,104.889,5.686)
C6: (79.728,107.062,4.519)
C5: (80.376,108.233,4.441)
O3': (77.744,102.531,5.987)
C2: (82.609,109.158,9.199)
OP1: (78.758,113.009,2.595)
OP2: (78.797,110.699,3.731)
C4: (81.518,107.147,8.755)
O5': (79.568,112.716,4.959)
C3': (82.977,112.140,6.508)
C1': (81.698,111.310,8.333)
O4': (80.804,111.733,7.311)
C5': (80.950,112.347,4.983)
P: (78.598,112.172,3.816)
O2: (83.534,109.804,9.710)
C4': (81.521,112.557,6.358)
C2': (83.093,111.862,8.005)
O2': (83.312,113.040,8.761)
N1: (81.605,109.843,8.480)
N3: (82.536,107.811,9.316)
N4: (81.500,105.822,8.873)
C6: (80.559,109.150,7.929)
C5: (80.475,107.817,8.041)
O3': (83.833,113.220,6.111)
OP1: (78.758,113.009,2.595)
OP2: (78.797,110.699,3.731)
C4: (81.518,107.147,8.755)
O5': (79.568,112.716,4.959)
C3': (82.977,112.140,6.508)
C1': (81.698,111.310,8.333)
O4': (80.804,111.733,7.311)
C5': (80.950,112.347,4.983)
P: (78.598,112.172,3.816)
O2: (83.534,109.804,9.710)
C4': (81.521,112.557,6.358)
C2': (83.093,111.862,8.005)
O2': (83.312,113.040,8.761)
N1: (81.605,109.843,8.480)
N3: (82.536,107.811,9.316)
N4: (81.500,105.822,8.873)
C6: (80.559,109.150,7.929)
C5: (80.475,107.817,8.041)
O3': (83.833,113.220,6.111)
Image (generated by PyMOL):