Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2XNZ:A35:A34
Extra
PDB:
ATOM 1 O3' C A 34 5.892 -8.457 11.776 1.00 37.91 O
ATOM 2 P U A 35 7.362 -9.086 11.936 1.00 39.27 P
ATOM 3 OP1 U A 35 7.373 -10.477 11.432 1.00 38.45 O
ATOM 4 OP2 U A 35 7.816 -8.783 13.312 1.00 38.17 O
ATOM 5 O5' U A 35 8.234 -8.203 10.928 1.00 37.21 O
ATOM 6 C5' U A 35 8.264 -8.478 9.534 1.00 36.14 C
ATOM 7 C4' U A 35 8.784 -7.264 8.789 1.00 33.79 C
ATOM 8 O4' U A 35 8.047 -6.081 9.196 1.00 32.56 O
ATOM 9 C3' U A 35 10.230 -6.884 9.096 1.00 33.12 C
ATOM 10 O3' U A 35 11.143 -7.661 8.352 1.00 32.01 O
ATOM 11 C2' U A 35 10.226 -5.438 8.631 1.00 31.65 C
ATOM 12 O2' U A 35 10.180 -5.344 7.223 1.00 32.35 O
ATOM 13 C1' U A 35 8.917 -4.953 9.234 1.00 31.46 C
ATOM 14 N1 U A 35 9.090 -4.388 10.626 1.00 30.02 N
ATOM 15 C2 U A 35 9.622 -3.114 10.768 1.00 29.96 C
ATOM 16 O2 U A 35 9.965 -2.406 9.835 1.00 28.44 O
ATOM 17 N3 U A 35 9.741 -2.679 12.067 1.00 30.04 N
ATOM 18 C4 U A 35 9.406 -3.374 13.218 1.00 29.97 C
ATOM 19 O4 U A 35 9.571 -2.846 14.312 1.00 30.05 O
ATOM 20 C5 U A 35 8.859 -4.691 12.993 1.00 29.98 C
ATOM 21 C6 U A 35 8.733 -5.136 11.737 1.00 29.94 C
ATOM 22 P A A 36 12.645 -7.885 8.857 1.00 33.39 P
ATOM 23 OP1 A A 36 13.260 -8.808 7.886 1.00 33.55 O
ATOM 24 OP2 A A 36 12.662 -8.201 10.303 1.00 31.67 O
ATOM 25 O5' A A 36 13.321 -6.446 8.691 1.00 32.31 O
TER
ATOM 1 O3' U B 33 5.007 -5.035 16.716 1.00 38.50 O
ATOM 2 P C B 34 6.095 -6.145 16.405 1.00 40.31 P
ATOM 3 OP1 C B 34 5.823 -7.306 17.288 1.00 41.68 O
ATOM 4 OP2 C B 34 7.425 -5.486 16.399 1.00 41.18 O
ATOM 5 O5' C B 34 5.782 -6.524 14.893 1.00 40.31 O
ATOM 6 C5' C B 34 4.630 -7.270 14.538 1.00 39.00 C
ATOM 7 C4' C B 34 4.374 -7.040 13.067 1.00 38.03 C
ATOM 8 O4' C B 34 3.910 -5.673 12.916 1.00 37.70 O
ATOM 9 C3' C B 34 5.619 -7.119 12.196 1.00 37.42 C
ATOM 10 O3' C B 34 5.892 -8.457 11.776 1.00 37.91 O
ATOM 11 C2' C B 34 5.233 -6.215 11.033 1.00 36.72 C
ATOM 12 O2' C B 34 4.410 -6.866 10.089 1.00 36.77 O
ATOM 13 C1' C B 34 4.441 -5.111 11.732 1.00 36.73 C
ATOM 14 N1 C B 34 5.225 -3.865 12.056 1.00 35.11 N
ATOM 15 C2 C B 34 5.748 -3.082 11.013 1.00 34.54 C
ATOM 16 O2 C B 34 5.562 -3.437 9.844 1.00 35.60 O
ATOM 17 N3 C B 34 6.451 -1.955 11.313 1.00 33.48 N
ATOM 18 C4 C B 34 6.634 -1.583 12.583 1.00 33.29 C
ATOM 19 N4 C B 34 7.321 -0.458 12.826 1.00 31.81 N
ATOM 20 C5 C B 34 6.101 -2.356 13.662 1.00 34.29 C
ATOM 21 C6 C B 34 5.416 -3.472 13.352 1.00 35.07 C
ATOM 22 P U B 35 7.362 -9.086 11.936 1.00 39.27 P
ATOM 23 OP1 U B 35 7.373 -10.477 11.432 1.00 38.45 O
ATOM 24 OP2 U B 35 7.816 -8.783 13.312 1.00 38.17 O
ATOM 25 O5' U B 35 8.234 -8.203 10.928 1.00 37.21 O
TER
ATOM 2 P U A 35 7.362 -9.086 11.936 1.00 39.27 P
ATOM 3 OP1 U A 35 7.373 -10.477 11.432 1.00 38.45 O
ATOM 4 OP2 U A 35 7.816 -8.783 13.312 1.00 38.17 O
ATOM 5 O5' U A 35 8.234 -8.203 10.928 1.00 37.21 O
ATOM 6 C5' U A 35 8.264 -8.478 9.534 1.00 36.14 C
ATOM 7 C4' U A 35 8.784 -7.264 8.789 1.00 33.79 C
ATOM 8 O4' U A 35 8.047 -6.081 9.196 1.00 32.56 O
ATOM 9 C3' U A 35 10.230 -6.884 9.096 1.00 33.12 C
ATOM 10 O3' U A 35 11.143 -7.661 8.352 1.00 32.01 O
ATOM 11 C2' U A 35 10.226 -5.438 8.631 1.00 31.65 C
ATOM 12 O2' U A 35 10.180 -5.344 7.223 1.00 32.35 O
ATOM 13 C1' U A 35 8.917 -4.953 9.234 1.00 31.46 C
ATOM 14 N1 U A 35 9.090 -4.388 10.626 1.00 30.02 N
ATOM 15 C2 U A 35 9.622 -3.114 10.768 1.00 29.96 C
ATOM 16 O2 U A 35 9.965 -2.406 9.835 1.00 28.44 O
ATOM 17 N3 U A 35 9.741 -2.679 12.067 1.00 30.04 N
ATOM 18 C4 U A 35 9.406 -3.374 13.218 1.00 29.97 C
ATOM 19 O4 U A 35 9.571 -2.846 14.312 1.00 30.05 O
ATOM 20 C5 U A 35 8.859 -4.691 12.993 1.00 29.98 C
ATOM 21 C6 U A 35 8.733 -5.136 11.737 1.00 29.94 C
ATOM 22 P A A 36 12.645 -7.885 8.857 1.00 33.39 P
ATOM 23 OP1 A A 36 13.260 -8.808 7.886 1.00 33.55 O
ATOM 24 OP2 A A 36 12.662 -8.201 10.303 1.00 31.67 O
ATOM 25 O5' A A 36 13.321 -6.446 8.691 1.00 32.31 O
TER
ATOM 1 O3' U B 33 5.007 -5.035 16.716 1.00 38.50 O
ATOM 2 P C B 34 6.095 -6.145 16.405 1.00 40.31 P
ATOM 3 OP1 C B 34 5.823 -7.306 17.288 1.00 41.68 O
ATOM 4 OP2 C B 34 7.425 -5.486 16.399 1.00 41.18 O
ATOM 5 O5' C B 34 5.782 -6.524 14.893 1.00 40.31 O
ATOM 6 C5' C B 34 4.630 -7.270 14.538 1.00 39.00 C
ATOM 7 C4' C B 34 4.374 -7.040 13.067 1.00 38.03 C
ATOM 8 O4' C B 34 3.910 -5.673 12.916 1.00 37.70 O
ATOM 9 C3' C B 34 5.619 -7.119 12.196 1.00 37.42 C
ATOM 10 O3' C B 34 5.892 -8.457 11.776 1.00 37.91 O
ATOM 11 C2' C B 34 5.233 -6.215 11.033 1.00 36.72 C
ATOM 12 O2' C B 34 4.410 -6.866 10.089 1.00 36.77 O
ATOM 13 C1' C B 34 4.441 -5.111 11.732 1.00 36.73 C
ATOM 14 N1 C B 34 5.225 -3.865 12.056 1.00 35.11 N
ATOM 15 C2 C B 34 5.748 -3.082 11.013 1.00 34.54 C
ATOM 16 O2 C B 34 5.562 -3.437 9.844 1.00 35.60 O
ATOM 17 N3 C B 34 6.451 -1.955 11.313 1.00 33.48 N
ATOM 18 C4 C B 34 6.634 -1.583 12.583 1.00 33.29 C
ATOM 19 N4 C B 34 7.321 -0.458 12.826 1.00 31.81 N
ATOM 20 C5 C B 34 6.101 -2.356 13.662 1.00 34.29 C
ATOM 21 C6 C B 34 5.416 -3.472 13.352 1.00 35.07 C
ATOM 22 P U B 35 7.362 -9.086 11.936 1.00 39.27 P
ATOM 23 OP1 U B 35 7.373 -10.477 11.432 1.00 38.45 O
ATOM 24 OP2 U B 35 7.816 -8.783 13.312 1.00 38.17 O
ATOM 25 O5' U B 35 8.234 -8.203 10.928 1.00 37.21 O
TER
Atoms:
C4: (9.406,-3.374,13.218)
N3: (9.741,-2.679,12.067)
OP1: (7.373,-10.477,11.432)
OP2: (7.816,-8.783,13.312)
C2: (9.622,-3.114,10.768)
C1': (8.917,-4.953,9.234)
C3': (10.230,-6.884,9.096)
O5': (8.234,-8.203,10.928)
O4': (8.047,-6.081,9.196)
C5': (8.264,-8.478,9.534)
P: (7.362,-9.086,11.936)
C4': (8.784,-7.264,8.789)
C2': (10.226,-5.438,8.631)
O2': (10.180,-5.344,7.223)
N1: (9.090,-4.388,10.626)
O4: (9.571,-2.846,14.312)
O2: (9.965,-2.406,9.835)
C6: (8.733,-5.136,11.737)
C5: (8.859,-4.691,12.993)
O3': (11.143,-7.661,8.352)
N3: (9.741,-2.679,12.067)
OP1: (7.373,-10.477,11.432)
OP2: (7.816,-8.783,13.312)
C2: (9.622,-3.114,10.768)
C1': (8.917,-4.953,9.234)
C3': (10.230,-6.884,9.096)
O5': (8.234,-8.203,10.928)
O4': (8.047,-6.081,9.196)
C5': (8.264,-8.478,9.534)
P: (7.362,-9.086,11.936)
C4': (8.784,-7.264,8.789)
C2': (10.226,-5.438,8.631)
O2': (10.180,-5.344,7.223)
N1: (9.090,-4.388,10.626)
O4: (9.571,-2.846,14.312)
O2: (9.965,-2.406,9.835)
C6: (8.733,-5.136,11.737)
C5: (8.859,-4.691,12.993)
O3': (11.143,-7.661,8.352)
C2: (5.748,-3.082,11.013)
OP1: (5.823,-7.306,17.288)
OP2: (7.425,-5.486,16.399)
C4: (6.634,-1.583,12.583)
O5': (5.782,-6.524,14.893)
C3': (5.619,-7.119,12.196)
C1': (4.441,-5.111,11.732)
O4': (3.910,-5.673,12.916)
C5': (4.630,-7.270,14.538)
P: (6.095,-6.145,16.405)
O2: (5.562,-3.437,9.844)
C4': (4.374,-7.040,13.067)
C2': (5.233,-6.215,11.033)
O2': (4.410,-6.866,10.089)
N1: (5.225,-3.865,12.056)
N3: (6.451,-1.955,11.313)
N4: (7.321,-0.458,12.826)
C6: (5.416,-3.472,13.352)
C5: (6.101,-2.356,13.662)
O3': (5.892,-8.457,11.776)
OP1: (5.823,-7.306,17.288)
OP2: (7.425,-5.486,16.399)
C4: (6.634,-1.583,12.583)
O5': (5.782,-6.524,14.893)
C3': (5.619,-7.119,12.196)
C1': (4.441,-5.111,11.732)
O4': (3.910,-5.673,12.916)
C5': (4.630,-7.270,14.538)
P: (6.095,-6.145,16.405)
O2: (5.562,-3.437,9.844)
C4': (4.374,-7.040,13.067)
C2': (5.233,-6.215,11.033)
O2': (4.410,-6.866,10.089)
N1: (5.225,-3.865,12.056)
N3: (6.451,-1.955,11.313)
N4: (7.321,-0.458,12.826)
C6: (5.416,-3.472,13.352)
C5: (6.101,-2.356,13.662)
O3': (5.892,-8.457,11.776)
Image (generated by PyMOL):