Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8N:A1223:A1221
Extra
PDB:
ATOM 1 O3' U A1222 -145.441 13.005 -4.379 1.00 35.37 O
ATOM 2 P A A1223 -144.345 12.117 -3.606 1.00 30.57 P
ATOM 3 OP1 A A1223 -144.883 11.858 -2.254 1.00 30.57 O
ATOM 4 OP2 A A1223 -143.034 12.803 -3.731 1.00 30.57 O
ATOM 5 O5' A A1223 -144.329 10.783 -4.449 1.00 30.57 O
ATOM 6 C5' A A1223 -145.468 9.958 -4.503 1.00 30.57 C
ATOM 7 C4' A A1223 -145.114 8.591 -4.996 1.00 30.57 C
ATOM 8 O4' A A1223 -144.554 8.706 -6.329 1.00 30.57 O
ATOM 9 C3' A A1223 -144.090 7.841 -4.145 1.00 30.57 C
ATOM 10 O3' A A1223 -144.533 6.510 -3.912 1.00 30.57 O
ATOM 11 C2' A A1223 -142.823 7.819 -5.002 1.00 30.57 C
ATOM 12 O2' A A1223 -142.054 6.636 -4.868 1.00 30.57 O
ATOM 13 C1' A A1223 -143.360 7.973 -6.421 1.00 30.57 C
ATOM 14 N9 A A1223 -142.463 8.702 -7.303 1.00 31.15 N
ATOM 15 C8 A A1223 -142.795 9.648 -8.234 1.00 31.15 C
ATOM 16 N7 A A1223 -141.764 10.130 -8.892 1.00 31.15 N
ATOM 17 C5 A A1223 -140.683 9.458 -8.342 1.00 31.15 C
ATOM 18 C6 A A1223 -139.308 9.522 -8.598 1.00 31.15 C
ATOM 19 N6 A A1223 -138.769 10.330 -9.511 1.00 31.15 N
ATOM 20 N1 A A1223 -138.494 8.722 -7.873 1.00 31.15 N
ATOM 21 C2 A A1223 -139.030 7.917 -6.946 1.00 31.15 C
ATOM 22 N3 A A1223 -140.315 7.769 -6.621 1.00 31.15 N
ATOM 23 C4 A A1223 -141.099 8.578 -7.361 1.00 31.15 C
ATOM 24 P C A1224 -144.820 6.010 -2.414 1.00 30.29 P
ATOM 25 OP1 C A1224 -145.317 4.616 -2.529 1.00 30.29 O
ATOM 26 OP2 C A1224 -145.687 7.038 -1.760 1.00 30.29 O
ATOM 27 O5' C A1224 -143.370 6.020 -1.746 1.00 30.29 O
TER
ATOM 1 O3' G B1220 -146.390 10.302 -10.819 1.00 37.61 O
ATOM 2 P C B1221 -146.364 11.559 -9.822 1.00 37.27 P
ATOM 3 OP1 C B1221 -145.511 11.197 -8.667 1.00 37.27 O
ATOM 4 OP2 C B1221 -147.769 11.941 -9.572 1.00 37.27 O
ATOM 5 O5' C B1221 -145.640 12.677 -10.687 1.00 37.27 O
ATOM 6 C5' C B1221 -144.259 12.564 -10.980 1.00 37.27 C
ATOM 7 C4' C B1221 -143.697 13.836 -11.552 1.00 37.27 C
ATOM 8 O4' C B1221 -144.361 14.139 -12.794 1.00 37.27 O
ATOM 9 C3' C B1221 -143.866 15.092 -10.709 1.00 37.27 C
ATOM 10 O3' C B1221 -142.877 15.196 -9.684 1.00 37.27 O
ATOM 11 C2' C B1221 -143.785 16.196 -11.754 1.00 37.27 C
ATOM 12 O2' C B1221 -142.432 16.502 -12.060 1.00 37.27 O
ATOM 13 C1' C B1221 -144.418 15.525 -12.977 1.00 37.27 C
ATOM 14 N1 C B1221 -145.826 15.913 -13.179 1.00 37.34 N
ATOM 15 C2 C B1221 -146.058 17.015 -13.999 1.00 37.34 C
ATOM 16 O2 C B1221 -145.068 17.610 -14.471 1.00 37.34 O
ATOM 17 N3 C B1221 -147.333 17.408 -14.236 1.00 37.34 N
ATOM 18 C4 C B1221 -148.342 16.746 -13.704 1.00 37.34 C
ATOM 19 N4 C B1221 -149.559 17.185 -13.975 1.00 37.34 N
ATOM 20 C5 C B1221 -148.143 15.614 -12.880 1.00 37.34 C
ATOM 21 C6 C B1221 -146.878 15.226 -12.644 1.00 37.34 C
ATOM 22 P U B1222 -142.781 16.506 -8.739 1.00 35.37 P
ATOM 23 OP1 U B1222 -143.386 17.633 -9.491 1.00 35.37 O
ATOM 24 OP2 U B1222 -141.372 16.627 -8.286 1.00 35.37 O
ATOM 25 O5' U B1222 -143.704 16.115 -7.508 1.00 35.37 O
TER
ATOM 2 P A A1223 -144.345 12.117 -3.606 1.00 30.57 P
ATOM 3 OP1 A A1223 -144.883 11.858 -2.254 1.00 30.57 O
ATOM 4 OP2 A A1223 -143.034 12.803 -3.731 1.00 30.57 O
ATOM 5 O5' A A1223 -144.329 10.783 -4.449 1.00 30.57 O
ATOM 6 C5' A A1223 -145.468 9.958 -4.503 1.00 30.57 C
ATOM 7 C4' A A1223 -145.114 8.591 -4.996 1.00 30.57 C
ATOM 8 O4' A A1223 -144.554 8.706 -6.329 1.00 30.57 O
ATOM 9 C3' A A1223 -144.090 7.841 -4.145 1.00 30.57 C
ATOM 10 O3' A A1223 -144.533 6.510 -3.912 1.00 30.57 O
ATOM 11 C2' A A1223 -142.823 7.819 -5.002 1.00 30.57 C
ATOM 12 O2' A A1223 -142.054 6.636 -4.868 1.00 30.57 O
ATOM 13 C1' A A1223 -143.360 7.973 -6.421 1.00 30.57 C
ATOM 14 N9 A A1223 -142.463 8.702 -7.303 1.00 31.15 N
ATOM 15 C8 A A1223 -142.795 9.648 -8.234 1.00 31.15 C
ATOM 16 N7 A A1223 -141.764 10.130 -8.892 1.00 31.15 N
ATOM 17 C5 A A1223 -140.683 9.458 -8.342 1.00 31.15 C
ATOM 18 C6 A A1223 -139.308 9.522 -8.598 1.00 31.15 C
ATOM 19 N6 A A1223 -138.769 10.330 -9.511 1.00 31.15 N
ATOM 20 N1 A A1223 -138.494 8.722 -7.873 1.00 31.15 N
ATOM 21 C2 A A1223 -139.030 7.917 -6.946 1.00 31.15 C
ATOM 22 N3 A A1223 -140.315 7.769 -6.621 1.00 31.15 N
ATOM 23 C4 A A1223 -141.099 8.578 -7.361 1.00 31.15 C
ATOM 24 P C A1224 -144.820 6.010 -2.414 1.00 30.29 P
ATOM 25 OP1 C A1224 -145.317 4.616 -2.529 1.00 30.29 O
ATOM 26 OP2 C A1224 -145.687 7.038 -1.760 1.00 30.29 O
ATOM 27 O5' C A1224 -143.370 6.020 -1.746 1.00 30.29 O
TER
ATOM 1 O3' G B1220 -146.390 10.302 -10.819 1.00 37.61 O
ATOM 2 P C B1221 -146.364 11.559 -9.822 1.00 37.27 P
ATOM 3 OP1 C B1221 -145.511 11.197 -8.667 1.00 37.27 O
ATOM 4 OP2 C B1221 -147.769 11.941 -9.572 1.00 37.27 O
ATOM 5 O5' C B1221 -145.640 12.677 -10.687 1.00 37.27 O
ATOM 6 C5' C B1221 -144.259 12.564 -10.980 1.00 37.27 C
ATOM 7 C4' C B1221 -143.697 13.836 -11.552 1.00 37.27 C
ATOM 8 O4' C B1221 -144.361 14.139 -12.794 1.00 37.27 O
ATOM 9 C3' C B1221 -143.866 15.092 -10.709 1.00 37.27 C
ATOM 10 O3' C B1221 -142.877 15.196 -9.684 1.00 37.27 O
ATOM 11 C2' C B1221 -143.785 16.196 -11.754 1.00 37.27 C
ATOM 12 O2' C B1221 -142.432 16.502 -12.060 1.00 37.27 O
ATOM 13 C1' C B1221 -144.418 15.525 -12.977 1.00 37.27 C
ATOM 14 N1 C B1221 -145.826 15.913 -13.179 1.00 37.34 N
ATOM 15 C2 C B1221 -146.058 17.015 -13.999 1.00 37.34 C
ATOM 16 O2 C B1221 -145.068 17.610 -14.471 1.00 37.34 O
ATOM 17 N3 C B1221 -147.333 17.408 -14.236 1.00 37.34 N
ATOM 18 C4 C B1221 -148.342 16.746 -13.704 1.00 37.34 C
ATOM 19 N4 C B1221 -149.559 17.185 -13.975 1.00 37.34 N
ATOM 20 C5 C B1221 -148.143 15.614 -12.880 1.00 37.34 C
ATOM 21 C6 C B1221 -146.878 15.226 -12.644 1.00 37.34 C
ATOM 22 P U B1222 -142.781 16.506 -8.739 1.00 35.37 P
ATOM 23 OP1 U B1222 -143.386 17.633 -9.491 1.00 35.37 O
ATOM 24 OP2 U B1222 -141.372 16.627 -8.286 1.00 35.37 O
ATOM 25 O5' U B1222 -143.704 16.115 -7.508 1.00 35.37 O
TER
Atoms:
OP1: (-144.883,11.858,-2.254)
OP2: (-143.034,12.803,-3.731)
C3': (-144.090,7.841,-4.145)
C1': (-143.360,7.973,-6.421)
C5': (-145.468,9.958,-4.503)
O4': (-144.554,8.706,-6.329)
C8: (-142.795,9.648,-8.234)
O2': (-142.054,6.636,-4.868)
C6: (-139.308,9.522,-8.598)
C5: (-140.683,9.458,-8.342)
C4: (-141.099,8.578,-7.361)
P: (-144.345,12.117,-3.606)
C4': (-145.114,8.591,-4.996)
C2': (-142.823,7.819,-5.002)
C2: (-139.030,7.917,-6.946)
N1: (-138.494,8.722,-7.873)
N3: (-140.315,7.769,-6.621)
N6: (-138.769,10.330,-9.511)
N7: (-141.764,10.130,-8.892)
N9: (-142.463,8.702,-7.303)
O5': (-144.329,10.783,-4.449)
O3': (-144.533,6.510,-3.912)
OP2: (-143.034,12.803,-3.731)
C3': (-144.090,7.841,-4.145)
C1': (-143.360,7.973,-6.421)
C5': (-145.468,9.958,-4.503)
O4': (-144.554,8.706,-6.329)
C8: (-142.795,9.648,-8.234)
O2': (-142.054,6.636,-4.868)
C6: (-139.308,9.522,-8.598)
C5: (-140.683,9.458,-8.342)
C4: (-141.099,8.578,-7.361)
P: (-144.345,12.117,-3.606)
C4': (-145.114,8.591,-4.996)
C2': (-142.823,7.819,-5.002)
C2: (-139.030,7.917,-6.946)
N1: (-138.494,8.722,-7.873)
N3: (-140.315,7.769,-6.621)
N6: (-138.769,10.330,-9.511)
N7: (-141.764,10.130,-8.892)
N9: (-142.463,8.702,-7.303)
O5': (-144.329,10.783,-4.449)
O3': (-144.533,6.510,-3.912)
C2: (-146.058,17.015,-13.999)
OP1: (-145.511,11.197,-8.667)
OP2: (-147.769,11.941,-9.572)
C4: (-148.342,16.746,-13.704)
O5': (-145.640,12.677,-10.687)
C3': (-143.866,15.092,-10.709)
C1': (-144.418,15.525,-12.977)
O4': (-144.361,14.139,-12.794)
C5': (-144.259,12.564,-10.980)
P: (-146.364,11.559,-9.822)
O2: (-145.068,17.610,-14.471)
C4': (-143.697,13.836,-11.552)
C2': (-143.785,16.196,-11.754)
O2': (-142.432,16.502,-12.060)
N1: (-145.826,15.913,-13.179)
N3: (-147.333,17.408,-14.236)
N4: (-149.559,17.185,-13.975)
C6: (-146.878,15.226,-12.644)
C5: (-148.143,15.614,-12.880)
O3': (-142.877,15.196,-9.684)
OP1: (-145.511,11.197,-8.667)
OP2: (-147.769,11.941,-9.572)
C4: (-148.342,16.746,-13.704)
O5': (-145.640,12.677,-10.687)
C3': (-143.866,15.092,-10.709)
C1': (-144.418,15.525,-12.977)
O4': (-144.361,14.139,-12.794)
C5': (-144.259,12.564,-10.980)
P: (-146.364,11.559,-9.822)
O2: (-145.068,17.610,-14.471)
C4': (-143.697,13.836,-11.552)
C2': (-143.785,16.196,-11.754)
O2': (-142.432,16.502,-12.060)
N1: (-145.826,15.913,-13.179)
N3: (-147.333,17.408,-14.236)
N4: (-149.559,17.185,-13.975)
C6: (-146.878,15.226,-12.644)
C5: (-148.143,15.614,-12.880)
O3': (-142.877,15.196,-9.684)
Image (generated by PyMOL):