Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8O:A1223:A1221
Extra
PDB:
ATOM 1 O3' U A1222 -99.478 106.912 78.544 1.00 51.98 O
ATOM 2 P A A1223 -98.879 107.607 79.866 1.00 53.94 P
ATOM 3 OP1 A A1223 -99.615 108.884 80.055 1.00 53.94 O
ATOM 4 OP2 A A1223 -97.407 107.648 79.698 1.00 53.94 O
ATOM 5 O5' A A1223 -99.261 106.586 81.030 1.00 53.94 O
ATOM 6 C5' A A1223 -100.536 106.642 81.665 1.00 53.94 C
ATOM 7 C4' A A1223 -100.438 106.382 83.152 1.00 53.94 C
ATOM 8 O4' A A1223 -99.924 105.037 83.374 1.00 53.94 O
ATOM 9 C3' A A1223 -99.516 107.323 83.916 1.00 53.94 C
ATOM 10 O3' A A1223 -100.062 107.593 85.203 1.00 53.94 O
ATOM 11 C2' A A1223 -98.231 106.517 84.056 1.00 53.94 C
ATOM 12 O2' A A1223 -97.436 106.867 85.167 1.00 53.94 O
ATOM 13 C1' A A1223 -98.750 105.088 84.160 1.00 53.94 C
ATOM 14 N9 A A1223 -97.813 104.097 83.638 1.00 53.52 N
ATOM 15 C8 A A1223 -98.035 103.054 82.775 1.00 53.52 C
ATOM 16 N7 A A1223 -96.959 102.360 82.495 1.00 53.52 N
ATOM 17 C5 A A1223 -95.968 103.009 83.217 1.00 53.52 C
ATOM 18 C6 A A1223 -94.591 102.774 83.350 1.00 53.52 C
ATOM 19 N6 A A1223 -93.947 101.769 82.727 1.00 53.52 N
ATOM 20 N1 A A1223 -93.903 103.618 84.160 1.00 53.52 N
ATOM 21 C2 A A1223 -94.545 104.613 84.778 1.00 53.52 C
ATOM 22 N3 A A1223 -95.826 104.926 84.721 1.00 53.52 N
ATOM 23 C4 A A1223 -96.480 104.080 83.917 1.00 53.52 C
ATOM 24 P C A1224 -100.508 109.087 85.579 1.00 53.91 P
ATOM 25 OP1 C A1224 -101.405 108.999 86.762 1.00 53.91 O
ATOM 26 OP2 C A1224 -101.020 109.717 84.330 1.00 53.91 O
ATOM 27 O5' C A1224 -99.136 109.765 85.994 1.00 53.91 O
TER
ATOM 1 O3' G B1220 -100.458 100.309 80.655 1.00 73.13 O
ATOM 2 P C B1221 -100.449 101.539 79.617 1.00 49.98 P
ATOM 3 OP1 C B1221 -100.135 102.768 80.386 1.00 49.98 O
ATOM 4 OP2 C B1221 -101.729 101.475 78.875 1.00 49.98 O
ATOM 5 O5' C B1221 -99.235 101.182 78.630 1.00 49.98 O
ATOM 6 C5' C B1221 -98.069 100.511 79.100 1.00 49.98 C
ATOM 7 C4' C B1221 -97.366 99.745 77.995 1.00 49.98 C
ATOM 8 O4' C B1221 -98.098 98.532 77.675 1.00 49.98 O
ATOM 9 C3' C B1221 -97.229 100.456 76.661 1.00 49.98 C
ATOM 10 O3' C B1221 -96.160 101.379 76.640 1.00 49.98 O
ATOM 11 C2' C B1221 -97.047 99.299 75.680 1.00 49.98 C
ATOM 12 O2' C B1221 -95.697 98.863 75.656 1.00 49.98 O
ATOM 13 C1' C B1221 -97.912 98.202 76.308 1.00 49.98 C
ATOM 14 N1 C B1221 -99.250 98.082 75.643 1.00 49.90 N
ATOM 15 C2 C B1221 -99.456 97.160 74.578 1.00 49.90 C
ATOM 16 O2 C B1221 -98.516 96.436 74.176 1.00 49.90 O
ATOM 17 N3 C B1221 -100.706 97.103 74.016 1.00 49.90 N
ATOM 18 C4 C B1221 -101.710 97.899 74.466 1.00 49.90 C
ATOM 19 N4 C B1221 -102.922 97.831 73.907 1.00 49.90 N
ATOM 20 C5 C B1221 -101.528 98.825 75.532 1.00 49.90 C
ATOM 21 C6 C B1221 -100.301 98.879 76.076 1.00 49.90 C
ATOM 22 P U B1222 -96.156 102.591 75.590 1.00 51.98 P
ATOM 23 OP1 U B1222 -96.155 101.996 74.223 1.00 51.98 O
ATOM 24 OP2 U B1222 -95.049 103.472 75.957 1.00 51.98 O
ATOM 25 O5' U B1222 -97.551 103.326 75.890 1.00 51.98 O
TER
ATOM 2 P A A1223 -98.879 107.607 79.866 1.00 53.94 P
ATOM 3 OP1 A A1223 -99.615 108.884 80.055 1.00 53.94 O
ATOM 4 OP2 A A1223 -97.407 107.648 79.698 1.00 53.94 O
ATOM 5 O5' A A1223 -99.261 106.586 81.030 1.00 53.94 O
ATOM 6 C5' A A1223 -100.536 106.642 81.665 1.00 53.94 C
ATOM 7 C4' A A1223 -100.438 106.382 83.152 1.00 53.94 C
ATOM 8 O4' A A1223 -99.924 105.037 83.374 1.00 53.94 O
ATOM 9 C3' A A1223 -99.516 107.323 83.916 1.00 53.94 C
ATOM 10 O3' A A1223 -100.062 107.593 85.203 1.00 53.94 O
ATOM 11 C2' A A1223 -98.231 106.517 84.056 1.00 53.94 C
ATOM 12 O2' A A1223 -97.436 106.867 85.167 1.00 53.94 O
ATOM 13 C1' A A1223 -98.750 105.088 84.160 1.00 53.94 C
ATOM 14 N9 A A1223 -97.813 104.097 83.638 1.00 53.52 N
ATOM 15 C8 A A1223 -98.035 103.054 82.775 1.00 53.52 C
ATOM 16 N7 A A1223 -96.959 102.360 82.495 1.00 53.52 N
ATOM 17 C5 A A1223 -95.968 103.009 83.217 1.00 53.52 C
ATOM 18 C6 A A1223 -94.591 102.774 83.350 1.00 53.52 C
ATOM 19 N6 A A1223 -93.947 101.769 82.727 1.00 53.52 N
ATOM 20 N1 A A1223 -93.903 103.618 84.160 1.00 53.52 N
ATOM 21 C2 A A1223 -94.545 104.613 84.778 1.00 53.52 C
ATOM 22 N3 A A1223 -95.826 104.926 84.721 1.00 53.52 N
ATOM 23 C4 A A1223 -96.480 104.080 83.917 1.00 53.52 C
ATOM 24 P C A1224 -100.508 109.087 85.579 1.00 53.91 P
ATOM 25 OP1 C A1224 -101.405 108.999 86.762 1.00 53.91 O
ATOM 26 OP2 C A1224 -101.020 109.717 84.330 1.00 53.91 O
ATOM 27 O5' C A1224 -99.136 109.765 85.994 1.00 53.91 O
TER
ATOM 1 O3' G B1220 -100.458 100.309 80.655 1.00 73.13 O
ATOM 2 P C B1221 -100.449 101.539 79.617 1.00 49.98 P
ATOM 3 OP1 C B1221 -100.135 102.768 80.386 1.00 49.98 O
ATOM 4 OP2 C B1221 -101.729 101.475 78.875 1.00 49.98 O
ATOM 5 O5' C B1221 -99.235 101.182 78.630 1.00 49.98 O
ATOM 6 C5' C B1221 -98.069 100.511 79.100 1.00 49.98 C
ATOM 7 C4' C B1221 -97.366 99.745 77.995 1.00 49.98 C
ATOM 8 O4' C B1221 -98.098 98.532 77.675 1.00 49.98 O
ATOM 9 C3' C B1221 -97.229 100.456 76.661 1.00 49.98 C
ATOM 10 O3' C B1221 -96.160 101.379 76.640 1.00 49.98 O
ATOM 11 C2' C B1221 -97.047 99.299 75.680 1.00 49.98 C
ATOM 12 O2' C B1221 -95.697 98.863 75.656 1.00 49.98 O
ATOM 13 C1' C B1221 -97.912 98.202 76.308 1.00 49.98 C
ATOM 14 N1 C B1221 -99.250 98.082 75.643 1.00 49.90 N
ATOM 15 C2 C B1221 -99.456 97.160 74.578 1.00 49.90 C
ATOM 16 O2 C B1221 -98.516 96.436 74.176 1.00 49.90 O
ATOM 17 N3 C B1221 -100.706 97.103 74.016 1.00 49.90 N
ATOM 18 C4 C B1221 -101.710 97.899 74.466 1.00 49.90 C
ATOM 19 N4 C B1221 -102.922 97.831 73.907 1.00 49.90 N
ATOM 20 C5 C B1221 -101.528 98.825 75.532 1.00 49.90 C
ATOM 21 C6 C B1221 -100.301 98.879 76.076 1.00 49.90 C
ATOM 22 P U B1222 -96.156 102.591 75.590 1.00 51.98 P
ATOM 23 OP1 U B1222 -96.155 101.996 74.223 1.00 51.98 O
ATOM 24 OP2 U B1222 -95.049 103.472 75.957 1.00 51.98 O
ATOM 25 O5' U B1222 -97.551 103.326 75.890 1.00 51.98 O
TER
Atoms:
OP1: (-99.615,108.884,80.055)
OP2: (-97.407,107.648,79.698)
C3': (-99.516,107.323,83.916)
C1': (-98.750,105.088,84.160)
C5': (-100.536,106.642,81.665)
O4': (-99.924,105.037,83.374)
C8: (-98.035,103.054,82.775)
O2': (-97.436,106.867,85.167)
C6: (-94.591,102.774,83.350)
C5: (-95.968,103.009,83.217)
C4: (-96.480,104.080,83.917)
P: (-98.879,107.607,79.866)
C4': (-100.438,106.382,83.152)
C2': (-98.231,106.517,84.056)
C2: (-94.545,104.613,84.778)
N1: (-93.903,103.618,84.160)
N3: (-95.826,104.926,84.721)
N6: (-93.947,101.769,82.727)
N7: (-96.959,102.360,82.495)
N9: (-97.813,104.097,83.638)
O5': (-99.261,106.586,81.030)
O3': (-100.062,107.593,85.203)
OP2: (-97.407,107.648,79.698)
C3': (-99.516,107.323,83.916)
C1': (-98.750,105.088,84.160)
C5': (-100.536,106.642,81.665)
O4': (-99.924,105.037,83.374)
C8: (-98.035,103.054,82.775)
O2': (-97.436,106.867,85.167)
C6: (-94.591,102.774,83.350)
C5: (-95.968,103.009,83.217)
C4: (-96.480,104.080,83.917)
P: (-98.879,107.607,79.866)
C4': (-100.438,106.382,83.152)
C2': (-98.231,106.517,84.056)
C2: (-94.545,104.613,84.778)
N1: (-93.903,103.618,84.160)
N3: (-95.826,104.926,84.721)
N6: (-93.947,101.769,82.727)
N7: (-96.959,102.360,82.495)
N9: (-97.813,104.097,83.638)
O5': (-99.261,106.586,81.030)
O3': (-100.062,107.593,85.203)
C2: (-99.456,97.160,74.578)
OP1: (-100.135,102.768,80.386)
OP2: (-101.729,101.475,78.875)
C4: (-101.710,97.899,74.466)
O5': (-99.235,101.182,78.630)
C3': (-97.229,100.456,76.661)
C1': (-97.912,98.202,76.308)
O4': (-98.098,98.532,77.675)
C5': (-98.069,100.511,79.100)
P: (-100.449,101.539,79.617)
O2: (-98.516,96.436,74.176)
C4': (-97.366,99.745,77.995)
C2': (-97.047,99.299,75.680)
O2': (-95.697,98.863,75.656)
N1: (-99.250,98.082,75.643)
N3: (-100.706,97.103,74.016)
N4: (-102.922,97.831,73.907)
C6: (-100.301,98.879,76.076)
C5: (-101.528,98.825,75.532)
O3': (-96.160,101.379,76.640)
OP1: (-100.135,102.768,80.386)
OP2: (-101.729,101.475,78.875)
C4: (-101.710,97.899,74.466)
O5': (-99.235,101.182,78.630)
C3': (-97.229,100.456,76.661)
C1': (-97.912,98.202,76.308)
O4': (-98.098,98.532,77.675)
C5': (-98.069,100.511,79.100)
P: (-100.449,101.539,79.617)
O2: (-98.516,96.436,74.176)
C4': (-97.366,99.745,77.995)
C2': (-97.047,99.299,75.680)
O2': (-95.697,98.863,75.656)
N1: (-99.250,98.082,75.643)
N3: (-100.706,97.103,74.016)
N4: (-102.922,97.831,73.907)
C6: (-100.301,98.879,76.076)
C5: (-101.528,98.825,75.532)
O3': (-96.160,101.379,76.640)
Image (generated by PyMOL):